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Lsi01G004360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G004360
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:3661554..3665404
RNA-Seq ExpressionLsi01G004360
SyntenyLsi01G004360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594667.1 hypothetical protein SDJN03_11220, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1759.57Show/hide
Query:  PTLPFSPQF-----------------VRLTFTLLKWESPQSTSTAHIPDRRVTVRGNSDMLFPKHELRVEHTVASRFSRPIAYNVFDEKSQPEL
        P  PF PQ                  + LTFT L+ +S QST TA  PDRRVTVRGN DMLF KH LRV+HTVASR SRP AY VFDEKSQPEL
Subjt:  PTLPFSPQF-----------------VRLTFTLLKWESPQSTSTAHIPDRRVTVRGNSDMLFPKHELRVEHTVASRFSRPIAYNVFDEKSQPEL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCGGGAAGAAAGTACAGAATTTGAAGAGAATGTATGGTTCGGTAGCTAATGGTGTTCTTGAATTCTATGTTATGAGACAATGGTTCAATTTACTGCAACATGT
TGAGGAGTGCAGGACCTCCATTTCGGAACTCATGGCTTGGAAAAACGATCCAAAAACCTATGTTGTTTGGGCTGGAACTTATCCATCCATGAACTCCTCCATCTTTGTTA
TCCATCGAGTATTGGTAAAGCAAATAATTAAGGCTTACATTCTCACCTCTCCTTTCAAATCAGGATTAATGGGATCCACAAGCAGAACTGACTCAGGTACAATTAGTTGT
TCACCTCTGCCTGGACGCAAATCCTCTGGCATTGGCATTATTCTTTGCTTCTCATCTGAAATTGCCATGAATGATCGTCCCAGAGAATTGAATGAATTCGGATCAGCTTT
TGAAAGGATTCCACTTCTGTTCCCCTGCTTCTGGCAATGCCCAGTTTCAGAGAATATTCTCCAATTCGAACCCCTCTGTGCCCATAGAGGCCGAGCACCAATTCTGACGC
CCACACTTCCTTTTTCTCCCCAATTTGTTCGCCTTACTTTTACGCTACTCAAATGGGAGTCTCCCCAATCCACGTCCACTGCGCACATTCCTGACCGACGTGTTACTGTG
CGAGGAAATTCTGACATGCTATTTCCTAAGCATGAGCTGCGTGTCGAACACACGGTTGCGTCGAGGTTTTCAAGGCCCATTGCGTATAATGTGTTCGACGAAAAGTCGCA
ACCGGAATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCGGGAAGAAAGTACAGAATTTGAAGAGAATGTATGGTTCGGTAGCTAATGGTGTTCTTGAATTCTATGTTATGAGACAATGGTTCAATTTACTGCAACATGT
TGAGGAGTGCAGGACCTCCATTTCGGAACTCATGGCTTGGAAAAACGATCCAAAAACCTATGTTGTTTGGGCTGGAACTTATCCATCCATGAACTCCTCCATCTTTGTTA
TCCATCGAGTATTGGTAAAGCAAATAATTAAGGCTTACATTCTCACCTCTCCTTTCAAATCAGGATTAATGGGATCCACAAGCAGAACTGACTCAGGTACAATTAGTTGT
TCACCTCTGCCTGGACGCAAATCCTCTGGCATTGGCATTATTCTTTGCTTCTCATCTGAAATTGCCATGAATGATCGTCCCAGAGAATTGAATGAATTCGGATCAGCTTT
TGAAAGGATTCCACTTCTGTTCCCCTGCTTCTGGCAATGCCCAGTTTCAGAGAATATTCTCCAATTCGAACCCCTCTGTGCCCATAGAGGCCGAGCACCAATTCTGACGC
CCACACTTCCTTTTTCTCCCCAATTTGTTCGCCTTACTTTTACGCTACTCAAATGGGAGTCTCCCCAATCCACGTCCACTGCGCACATTCCTGACCGACGTGTTACTGTG
CGAGGAAATTCTGACATGCTATTTCCTAAGCATGAGCTGCGTGTCGAACACACGGTTGCGTCGAGGTTTTCAAGGCCCATTGCGTATAATGTGTTCGACGAAAAGTCGCA
ACCGGAATTATGA
Protein sequenceShow/hide protein sequence
MGFGKKVQNLKRMYGSVANGVLEFYVMRQWFNLLQHVEECRTSISELMAWKNDPKTYVVWAGTYPSMNSSIFVIHRVLVKQIIKAYILTSPFKSGLMGSTSRTDSGTISC
SPLPGRKSSGIGIILCFSSEIAMNDRPRELNEFGSAFERIPLLFPCFWQCPVSENILQFEPLCAHRGRAPILTPTLPFSPQFVRLTFTLLKWESPQSTSTAHIPDRRVTV
RGNSDMLFPKHELRVEHTVASRFSRPIAYNVFDEKSQPEL