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Lsi01G004370 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G004370
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHydantoin utilization protein B
Genome locationchr01:3664982..3665438
RNA-Seq ExpressionLsi01G004370
SyntenyLsi01G004370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN49101.1 hypothetical protein Csa_003514 [Cucumis sativus]3.5e-4181.48Show/hide
Query:  MGLENLDATVCSTRSSCLGNSMSEFPRTVTRRSGMCAVDVDWGDSHLSSVKTRTNWGEKGSVGVRIGARPLWAQRGSNWRIFSETGHCQKQGNRSGILSK
        M LENLD TVCSTRS CLGNSMSEFPRTVTRRSGM AV VDWGDSH SSVKTRTNW EK +  VR+ ARPLWA+ GSNWRIFSET   QKQ NRSGILS+
Subjt:  MGLENLDATVCSTRSSCLGNSMSEFPRTVTRRSGMCAVDVDWGDSHLSSVKTRTNWGEKGSVGVRIGARPLWAQRGSNWRIFSETGHCQKQGNRSGILSK

Query:  GIMAELDL
        GIMAELDL
Subjt:  GIMAELDL
TYK13037.1 Hydantoin utilization protein B [Cucumis melo var. makuwa]2.0e-2867.92Show/hide
Query:  LENLDATVCSTRSSCLGNSMSEFPRTVTRRSGMCAVDVDWGDSHLSSVKTRTNWGEKGSVGVRIGARPLWAQRGSNWRIFSETGHCQKQGNRSGILSKGI
        LENLD TVCSTRS CLGNSMSEFPRT                       TRTNWGEK +VGVR+ ARPLWA+RGSNWRIFSET   QKQ NRSGILSKGI
Subjt:  LENLDATVCSTRSSCLGNSMSEFPRTVTRRSGMCAVDVDWGDSHLSSVKTRTNWGEKGSVGVRIGARPLWAQRGSNWRIFSETGHCQKQGNRSGILSKGI

Query:  MAELDL
        MAELDL
Subjt:  MAELDL
TrEMBL top hitse value%identityAlignment
A0A0A0KN07 Hydantoin utilization protein B1.7e-4181.48Show/hide
Query:  MGLENLDATVCSTRSSCLGNSMSEFPRTVTRRSGMCAVDVDWGDSHLSSVKTRTNWGEKGSVGVRIGARPLWAQRGSNWRIFSETGHCQKQGNRSGILSK
        M LENLD TVCSTRS CLGNSMSEFPRTVTRRSGM AV VDWGDSH SSVKTRTNW EK +  VR+ ARPLWA+ GSNWRIFSET   QKQ NRSGILS+
Subjt:  MGLENLDATVCSTRSSCLGNSMSEFPRTVTRRSGMCAVDVDWGDSHLSSVKTRTNWGEKGSVGVRIGARPLWAQRGSNWRIFSETGHCQKQGNRSGILSK

Query:  GIMAELDL
        GIMAELDL
Subjt:  GIMAELDL
A0A5D3CM64 Hydantoin utilization protein B9.6e-2967.92Show/hide
Query:  LENLDATVCSTRSSCLGNSMSEFPRTVTRRSGMCAVDVDWGDSHLSSVKTRTNWGEKGSVGVRIGARPLWAQRGSNWRIFSETGHCQKQGNRSGILSKGI
        LENLD TVCSTRS CLGNSMSEFPRT                       TRTNWGEK +VGVR+ ARPLWA+RGSNWRIFSET   QKQ NRSGILSKGI
Subjt:  LENLDATVCSTRSSCLGNSMSEFPRTVTRRSGMCAVDVDWGDSHLSSVKTRTNWGEKGSVGVRIGARPLWAQRGSNWRIFSETGHCQKQGNRSGILSKGI

Query:  MAELDL
        MAELDL
Subjt:  MAELDL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTTGAAAACCTCGACGCAACCGTGTGTTCGACACGCAGCTCATGCTTAGGAAATAGCATGTCAGAATTTCCTCGCACAGTAACACGTCGGTCAGGAATGTGCGC
AGTGGACGTGGATTGGGGAGACTCCCATTTGAGTAGCGTAAAAACGCGAACAAATTGGGGAGAAAAAGGAAGTGTGGGCGTCAGAATTGGTGCTCGGCCTCTATGGGCAC
AGAGGGGTTCGAATTGGAGAATATTCTCTGAAACTGGGCATTGCCAGAAGCAGGGGAACAGAAGTGGAATCCTAAGCAAAGGAATTATGGCGGAGTTAGACTTG
mRNA sequenceShow/hide mRNA sequence
GAAACATACCAAAAGCTCCTATTGAAAGCGAACCTCATAATTCCGGTTGCGACTTTTCGTCGAACACATTATACGCAATGGGCCTTGAAAACCTCGACGCAACCGTGTGT
TCGACACGCAGCTCATGCTTAGGAAATAGCATGTCAGAATTTCCTCGCACAGTAACACGTCGGTCAGGAATGTGCGCAGTGGACGTGGATTGGGGAGACTCCCATTTGAG
TAGCGTAAAAACGCGAACAAATTGGGGAGAAAAAGGAAGTGTGGGCGTCAGAATTGGTGCTCGGCCTCTATGGGCACAGAGGGGTTCGAATTGGAGAATATTCTCTGAAA
CTGGGCATTGCCAGAAGCAGGGGAACAGAAGTGGAATCCTAAGCAAAGGAATTATGGCGGAGTTAGACTTG
Protein sequenceShow/hide protein sequence
MGLENLDATVCSTRSSCLGNSMSEFPRTVTRRSGMCAVDVDWGDSHLSSVKTRTNWGEKGSVGVRIGARPLWAQRGSNWRIFSETGHCQKQGNRSGILSKGIMAELDL