; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G004440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G004440
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEndoplasmic reticulum transmembrane protein
Genome locationchr01:3702990..3704719
RNA-Seq ExpressionLsi01G004440
SyntenyLsi01G004440
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008417 - B-cell receptor-associated protein 29/31
IPR041672 - Bap31/Bap29 cytoplasmic coiled-coil domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026640.1 B-cell receptor-associated protein 31 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-4960.18Show/hide
Query:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------
        MIQLLFTVILSEM+LILLFSFKTPLRKLVIL VDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTI++RWIDDGA+NPTDQVLMVKHLLEATLM      
Subjt:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------

Query:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN
                                                                                 EANVVALRKQSEGLLLEYDRLLEENQN
Subjt:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN

Query:  LRGQLQSVDRRLSRSGSKKNS
        LR Q+QS+D RLSRSGSKKNS
Subjt:  LRGQLQSVDRRLSRSGSKKNS

XP_004134773.1 uncharacterized protein LOC101221743 [Cucumis sativus]4.4e-5262.9Show/hide
Query:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------
        MIQLLFTVI+SEMVLILLFSFKTPLRKLVILAVDR+KRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM      
Subjt:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------

Query:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN
                                                                                 EANVVALRKQSEGLLLEYDRLLEENQN
Subjt:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN

Query:  LRGQLQSVDRRLSRSGSKKNS
        LRGQLQSV+RRLSRSGSKKNS
Subjt:  LRGQLQSVDRRLSRSGSKKNS

XP_008440020.1 PREDICTED: uncharacterized protein LOC103484623 [Cucumis melo]4.4e-5262.9Show/hide
Query:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------
        MIQLLFTVI+SEMVLILLFSFKTPLRKLVILAVDR+KRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM      
Subjt:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------

Query:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN
                                                                                 EANVVALRKQSEGLLLEYDRLLEENQN
Subjt:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN

Query:  LRGQLQSVDRRLSRSGSKKNS
        LRGQLQSV+RRLSRSGSKKNS
Subjt:  LRGQLQSVDRRLSRSGSKKNS

XP_022926894.1 B-cell receptor-associated protein 31-like [Cucurbita moschata]5.4e-5060.63Show/hide
Query:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------
        MIQLLFTVILSEM+LILLFSFKTPLRKLVIL VDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTI+KRWIDDGA+NPTDQVLMVKHLLEATLM      
Subjt:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------

Query:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN
                                                                                 EANVVALRKQSEGLLLEYDRLLEENQN
Subjt:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN

Query:  LRGQLQSVDRRLSRSGSKKNS
        LR Q+QS+D RLSRSGSKKNS
Subjt:  LRGQLQSVDRRLSRSGSKKNS

XP_038883086.1 uncharacterized protein LOC120074142 [Benincasa hispida]1.3e-5162.44Show/hide
Query:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------
        MIQLLFTVI+SEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTV+GTVLIVLLSSVYSMVTIQKRW+DDGAINPTDQVLMVKHLLEATLM      
Subjt:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------

Query:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN
                                                                                 EANVVALRKQSEGLLLEYDRLLEENQN
Subjt:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN

Query:  LRGQLQSVDRRLSRSGSKKNS
        LRGQLQSVD RLSRSGSKKNS
Subjt:  LRGQLQSVDRRLSRSGSKKNS

TrEMBL top hitse value%identityAlignment
A0A0A0KHS8 Endoplasmic reticulum transmembrane protein2.1e-5262.9Show/hide
Query:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------
        MIQLLFTVI+SEMVLILLFSFKTPLRKLVILAVDR+KRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM      
Subjt:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------

Query:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN
                                                                                 EANVVALRKQSEGLLLEYDRLLEENQN
Subjt:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN

Query:  LRGQLQSVDRRLSRSGSKKNS
        LRGQLQSV+RRLSRSGSKKNS
Subjt:  LRGQLQSVDRRLSRSGSKKNS

A0A1S3AZQ0 Endoplasmic reticulum transmembrane protein2.1e-5262.9Show/hide
Query:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------
        MIQLLFTVI+SEMVLILLFSFKTPLRKLVILAVDR+KRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM      
Subjt:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------

Query:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN
                                                                                 EANVVALRKQSEGLLLEYDRLLEENQN
Subjt:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN

Query:  LRGQLQSVDRRLSRSGSKKNS
        LRGQLQSV+RRLSRSGSKKNS
Subjt:  LRGQLQSVDRRLSRSGSKKNS

A0A5D3CMI8 Endoplasmic reticulum transmembrane protein2.1e-5262.9Show/hide
Query:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------
        MIQLLFTVI+SEMVLILLFSFKTPLRKLVILAVDR+KRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM      
Subjt:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------

Query:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN
                                                                                 EANVVALRKQSEGLLLEYDRLLEENQN
Subjt:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN

Query:  LRGQLQSVDRRLSRSGSKKNS
        LRGQLQSV+RRLSRSGSKKNS
Subjt:  LRGQLQSVDRRLSRSGSKKNS

A0A6J1EGG1 Endoplasmic reticulum transmembrane protein2.6e-5060.63Show/hide
Query:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------
        MIQLLFTVILSEM+LILLFSFKTPLRKLVIL VDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTI+KRWIDDGA+NPTDQVLMVKHLLEATLM      
Subjt:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------

Query:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN
                                                                                 EANVVALRKQSEGLLLEYDRLLEENQN
Subjt:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN

Query:  LRGQLQSVDRRLSRSGSKKNS
        LR Q+QS+D RLSRSGSKKNS
Subjt:  LRGQLQSVDRRLSRSGSKKNS

A0A6J1KTD0 Endoplasmic reticulum transmembrane protein2.6e-5060.63Show/hide
Query:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------
        MIQLLFTVILSEM+LILLFSFKTPLRKLVIL VDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTI+KRWIDDGA+NPTDQVLMVKHLLEATLM      
Subjt:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------

Query:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN
                                                                                 EANVVALRKQSEGLLLEYDRLLEENQN
Subjt:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN

Query:  LRGQLQSVDRRLSRSGSKKNS
        LR Q+QS+D RLSRSGSKKNS
Subjt:  LRGQLQSVDRRLSRSGSKKNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11905.1 B-cell receptor-associated protein 31-like9.8e-3440.27Show/hide
Query:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------
        M QLLF V+L E+V+I+  SFKTP+RKL+I+++DR KRGRGP++++TV+ TV+++L++SVY+M+ IQKRWI+DG +NPTD+V+M KHLLE+TLM      
Subjt:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------

Query:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN
                                                                                 + + VAL+KQSEG L+E++RLLEENQ 
Subjt:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN

Query:  LRGQLQSVDRRLSRSGSKKNS
        LR QL +VD +LSRS SKKN+
Subjt:  LRGQLQSVDRRLSRSGSKKNS

AT1G11905.2 B-cell receptor-associated protein 31-like7.5e-3440.45Show/hide
Query:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------
        M QLLF V+L E+V+I+  SFKTP+RKL+I+++DR KRGRGP++++TV+ TV+++L++SVY+M+ IQKRWI+DG +NPTD+V+M KHLLE+TLM      
Subjt:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------

Query:  ------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQNL
                                                                                + + VAL+KQSEG L+E++RLLEENQ L
Subjt:  ------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQNL

Query:  RGQLQSVDRRLSRSGSKKNS
        R QL +VD +LSRS SKKN+
Subjt:  RGQLQSVDRRLSRSGSKKNS

AT3G07190.1 B-cell receptor-associated protein 31-like1.1e-1330.99Show/hide
Query:  MIQLLFTVILSEMVLILLFSFKT-PLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM-----
        MIQLLF V+  E  +  L   K  PLR+LV+ ++D+LK G+ P  +KT+AGT+ ++LLS++ +++ IQ +    G ++P DQVL   HLLEA+LM     
Subjt:  MIQLLFTVILSEMVLILLFSFKT-PLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM-----

Query:  ---------------------------------------------------------------------------------EANVVALRKQSEGLLLEYD
                                                                                         EA+V AL+KQS  LLLEYD
Subjt:  ---------------------------------------------------------------------------------EANVVALRKQSEGLLLEYD

Query:  RLLEENQNLRGQL
        RLLE+NQNL+ Q+
Subjt:  RLLEENQNLRGQL

AT5G42570.1 B-cell receptor-associated 31-like1.9e-2940.87Show/hide
Query:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------
        MI LL+TVI +EM LILL  FKTPLRKL+IL  DR+KRGRGP++VKT+  TV +VLLSS+YS+V IQ+R  D   +NPTDQVL  KHLLEA+LM      
Subjt:  MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM------

Query:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN
                                                                                 +    ALRKQ++G L+EYDRLLE+NQN
Subjt:  -------------------------------------------------------------------------EANVVALRKQSEGLLLEYDRLLEENQN

Query:  LRGQLQSV
        LR QL+S+
Subjt:  LRGQLQSV

AT5G48660.1 B-cell receptor-associated protein 31-like8.7e-1430.99Show/hide
Query:  MIQLLFTVILSEMVLILLFSFKT-PLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM-----
        MIQLLF V+  E  +  L   K  PLR+LVI ++D++K G+GP  VKT+AGT+ ++L S++ S+V IQ +    G ++P DQVL   HLLEA+L+     
Subjt:  MIQLLFTVILSEMVLILLFSFKT-PLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLM-----

Query:  ---------------------------------------------------------------------------------EANVVALRKQSEGLLLEYD
                                                                                         E +V AL+KQS  LLLEYD
Subjt:  ---------------------------------------------------------------------------------EANVVALRKQSEGLLLEYD

Query:  RLLEENQNLRGQL
        RLLE+NQ+L+ Q+
Subjt:  RLLEENQNLRGQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCAGCTGTTGTTCACGGTGATTCTATCGGAGATGGTTCTGATTTTGCTCTTCTCCTTCAAAACCCCTTTGAGGAAGCTTGTGATCTTGGCCGTCGATCGCCTGAA
GCGCGGTCGCGGTCCTATTATGGTGAAGACCGTCGCCGGAACTGTTCTTATTGTTCTGCTTTCCAGTGTTTACAGTATGGTTACGATCCAGAAGCGTTGGATCGATGATG
GTGCCATCAACCCCACCGATCAGGTTCTCATGGTCAAGCATCTTCTCGAGGCCACGCTTATGGAAGCCAATGTAGTAGCTTTAAGGAAACAATCTGAAGGATTACTGCTC
GAGTATGACCGTTTACTTGAGGAAAACCAAAACCTTCGGGGCCAATTACAATCCGTGGATCGCAGATTGTCTCGATCGGGAAGCAAGAAGAATTCTTAA
mRNA sequenceShow/hide mRNA sequence
AACACAAATAATAAATAGAATTTGGATTTATAGAACGTGGAAGGCCACGACATTTCTCTTTACCTCTCTCAAACTCTCCTCTTTCCTTCTCCTTTTCCTCTTTACAATAC
CATAATTTAATGCTTCAGCTCTCGTGAGGTTCGTTCCTCTGCTCAGTGATTACGCCCACCTTCCCTCCATTGCTTCCACAACACAACCCATCTCATGATATTTGGCCATA
CCCCTTTTCTCCCTCCATCATTTTTCACATCTTCCCTCTCATAAATTCCTACCCCAAGATCCAAAATCTGCAAATCCTGAATTCCAACTCCATTTCTCCAAATGATTCAG
CTGTTGTTCACGGTGATTCTATCGGAGATGGTTCTGATTTTGCTCTTCTCCTTCAAAACCCCTTTGAGGAAGCTTGTGATCTTGGCCGTCGATCGCCTGAAGCGCGGTCG
CGGTCCTATTATGGTGAAGACCGTCGCCGGAACTGTTCTTATTGTTCTGCTTTCCAGTGTTTACAGTATGGTTACGATCCAGAAGCGTTGGATCGATGATGGTGCCATCA
ACCCCACCGATCAGGTTCTCATGGTCAAGCATCTTCTCGAGGCCACGCTTATGGAAGCCAATGTAGTAGCTTTAAGGAAACAATCTGAAGGATTACTGCTCGAGTATGAC
CGTTTACTTGAGGAAAACCAAAACCTTCGGGGCCAATTACAATCCGTGGATCGCAGATTGTCTCGATCGGGAAGCAAGAAGAATTCTTAA
Protein sequenceShow/hide protein sequence
MIQLLFTVILSEMVLILLFSFKTPLRKLVILAVDRLKRGRGPIMVKTVAGTVLIVLLSSVYSMVTIQKRWIDDGAINPTDQVLMVKHLLEATLMEANVVALRKQSEGLLL
EYDRLLEENQNLRGQLQSVDRRLSRSGSKKNS