; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G004550 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G004550
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description50S ribosomal protein L4
Genome locationchr01:3785540..3789647
RNA-Seq ExpressionLsi01G004550
SyntenyLsi01G004550
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002136 - Ribosomal protein L4/L1e
IPR013005 - 50S ribosomal protein uL4
IPR023574 - Ribosomal protein L4 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134779.1 uncharacterized protein LOC101223158 [Cucumis sativus]1.0e-13282.54Show/hide
Query:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGL
        MAISVSRRLLRS+ SLSTFGQCNSSC MS+SF N HEIYG V+G SS FA  STLLKAGSFLASRG CTS LTPESSN AFPSELLS KPV  EERKIGL
Subjt:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGL

Query:  LQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
         QDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW QKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
Subjt:  LQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA

Query:  FKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD
        FKLNKKVRRLGLMIALSAR AEGK                                VDGGPIDEKLKLATQNLHYVNVLPSIGLNVY ILLHDTLVMSRD
Subjt:  FKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD

Query:  AVERIVTRMHTPISR
        AVERIVTRMHTPI+R
Subjt:  AVERIVTRMHTPISR

XP_008440040.1 PREDICTED: 50S ribosomal protein L4 [Cucumis melo]5.2e-12980.83Show/hide
Query:  ISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGLLQ
        ISVSRRLLRSM SLSTFGQCNSSC MSQSF N HEI G V+G SS FA  STLLKAG+FLASRG C+S LTPESSN AFPSELLS KPV  EERKIGL Q
Subjt:  ISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGLLQ

Query:  DLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFK
        DLMIPVTNF+NEDKGFM+LAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW QKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFK
Subjt:  DLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFK

Query:  LNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAV
        LNKKVRRLGLMIALSAR AEGK                                VDGGPI+EKLKLATQNLHYVNVLPSIGLNVY ILLHDTLVMSRDAV
Subjt:  LNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAV

Query:  ERIVTRMHTPISR
        ERIVTRMHTPI+R
Subjt:  ERIVTRMHTPISR

XP_022132909.1 uncharacterized protein LOC111005636 isoform X1 [Momordica charantia]7.3e-13180.95Show/hide
Query:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGL
        MAI+VSRRLLRS+ S  TFGQCNSSCIM+QS YNSHEIYG VNG SSMFAG STLLKAG F AS+GL TS LTPESS AAFPS+LLS  PV LEERKIGL
Subjt:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGL

Query:  LQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
        LQDLMIPVTNF+NEDKGFMVLAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW QKGTGRARHGTLRGPQFRGGA MHGPKPRSHA
Subjt:  LQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA

Query:  FKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD
        FKLNKKVRRLGL IALSARAAEGK                                VDGGPIDEKLKLATQNLHYVNVLPSIGLNVY ILLHDTLVMSRD
Subjt:  FKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD

Query:  AVERIVTRMHTPISR
        A+ERIVTRMHTPI+R
Subjt:  AVERIVTRMHTPISR

XP_022950857.1 uncharacterized protein LOC111453831 [Cucurbita moschata]1.4e-12680Show/hide
Query:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGL
        MAISVSRRLLRS+ SLSTFGQCNSSC MSQSFYNS EIYG V G SSMFAG STLLKAG+FL S+GL TS LTPESSNA         KPVV EERKIGL
Subjt:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGL

Query:  LQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
        LQDLMIPVTNF+NEDKGFMVLAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW QKGTGRARHGTLRGPQFRGGA MHGPKPRSHA
Subjt:  LQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA

Query:  FKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD
        FKLNKKVRRLGL IAL+ARAAEGK                                VDGGPIDEKLKLATQNLHYVNVLPSIGLNVY ILLHDTLVMSRD
Subjt:  FKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD

Query:  AVERIVTRMHTPISR
        AVERIVTRMHTPI+R
Subjt:  AVERIVTRMHTPISR

XP_038881662.1 50S ribosomal protein L4 [Benincasa hispida]8.0e-13884.76Show/hide
Query:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGL
        MAISVSRRLLRSM SLSTFGQCNS C MSQSFYNSHEIYG VNG SS+FAG STLLKAGSFLASRG C+S LTPESSNAAFPS LLS KPVVLEERKIGL
Subjt:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGL

Query:  LQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
        LQDLMIPVTNF+NEDKGFMVLAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGA MHGPKPRSHA
Subjt:  LQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA

Query:  FKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD
        FKLNKKVRRLGL IALSARAAEGK                                VDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD
Subjt:  FKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD

Query:  AVERIVTRMHTPISR
        AVERIVTRMHTPISR
Subjt:  AVERIVTRMHTPISR

TrEMBL top hitse value%identityAlignment
A0A0A0KH99 Uncharacterized protein4.9e-13382.54Show/hide
Query:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGL
        MAISVSRRLLRS+ SLSTFGQCNSSC MS+SF N HEIYG V+G SS FA  STLLKAGSFLASRG CTS LTPESSN AFPSELLS KPV  EERKIGL
Subjt:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGL

Query:  LQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
         QDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW QKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
Subjt:  LQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA

Query:  FKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD
        FKLNKKVRRLGLMIALSAR AEGK                                VDGGPIDEKLKLATQNLHYVNVLPSIGLNVY ILLHDTLVMSRD
Subjt:  FKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD

Query:  AVERIVTRMHTPISR
        AVERIVTRMHTPI+R
Subjt:  AVERIVTRMHTPISR

A0A1S3B0T2 50S ribosomal protein L42.5e-12980.83Show/hide
Query:  ISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGLLQ
        ISVSRRLLRSM SLSTFGQCNSSC MSQSF N HEI G V+G SS FA  STLLKAG+FLASRG C+S LTPESSN AFPSELLS KPV  EERKIGL Q
Subjt:  ISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGLLQ

Query:  DLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFK
        DLMIPVTNF+NEDKGFM+LAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW QKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFK
Subjt:  DLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFK

Query:  LNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAV
        LNKKVRRLGLMIALSAR AEGK                                VDGGPI+EKLKLATQNLHYVNVLPSIGLNVY ILLHDTLVMSRDAV
Subjt:  LNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAV

Query:  ERIVTRMHTPISR
        ERIVTRMHTPI+R
Subjt:  ERIVTRMHTPISR

A0A6J1BUE8 uncharacterized protein LOC111005636 isoform X13.5e-13180.95Show/hide
Query:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGL
        MAI+VSRRLLRS+ S  TFGQCNSSCIM+QS YNSHEIYG VNG SSMFAG STLLKAG F AS+GL TS LTPESS AAFPS+LLS  PV LEERKIGL
Subjt:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGL

Query:  LQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
        LQDLMIPVTNF+NEDKGFMVLAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW QKGTGRARHGTLRGPQFRGGA MHGPKPRSHA
Subjt:  LQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA

Query:  FKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD
        FKLNKKVRRLGL IALSARAAEGK                                VDGGPIDEKLKLATQNLHYVNVLPSIGLNVY ILLHDTLVMSRD
Subjt:  FKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD

Query:  AVERIVTRMHTPISR
        A+ERIVTRMHTPI+R
Subjt:  AVERIVTRMHTPISR

A0A6J1GH25 uncharacterized protein LOC1114538316.9e-12780Show/hide
Query:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGL
        MAISVSRRLLRS+ SLSTFGQCNSSC MSQSFYNS EIYG V G SSMFAG STLLKAG+FL S+GL TS LTPESSNA         KPVV EERKIGL
Subjt:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGL

Query:  LQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
        LQDLMIPVTNF+NEDKGFMVLAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW QKGTGRARHGTLRGPQFRGGA MHGPKPRSHA
Subjt:  LQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA

Query:  FKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD
        FKLNKKVRRLGL IAL+ARAAEGK                                VDGGPIDEKLKLATQNLHYVNVLPSIGLNVY ILLHDTLVMSRD
Subjt:  FKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD

Query:  AVERIVTRMHTPISR
        AVERIVTRMHTPI+R
Subjt:  AVERIVTRMHTPISR

A0A6J1IUG2 uncharacterized protein LOC1114786841.5e-12679.68Show/hide
Query:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGL
        MAISVSRRLLRS+ SLSTFGQCNSSC MSQSFYNS EIYG V G SSMFAG STLLKAG+FL S+GL TS LTPESSNA         KPVV EERKIGL
Subjt:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGL

Query:  LQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA
        LQDLMIPVTNF+NEDKGFMVLAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW QKGTGRARHGTLRGPQFRGGA MHGPKPRSHA
Subjt:  LQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHA

Query:  FKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD
        FKLNKKVRRLGL IAL+ARAAEGK                                VDGGPIDEKLKLATQNLHYVNVLPSIGLNVY ILLHDTLVMSRD
Subjt:  FKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD

Query:  AVERIVTRMHTPISR
        AVE+IVTRMHTPI+R
Subjt:  AVERIVTRMHTPISR

SwissProt top hitse value%identityAlignment
B6IRQ7 50S ribosomal protein L43.5e-4348.26Show/hide
Query:  VTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKV
        V N  NE  G + LA +VF LP R+DI+ R+V WQLAKR+QGTH TK ISE++GT +KPW QKGTGRAR G+ R PQFRGGA + GP  RSH   L KKV
Subjt:  VTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKV

Query:  RRLGLMIALSARAAEGK------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERIVTR
        R+L L  ALS +AAEGK                               +DG  +DE    A +N+ +++VLP  G NVYDIL  D LV++R+AVE++  R
Subjt:  RRLGLMIALSARAAEGK------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERIVTR

Query:  M
        +
Subjt:  M

Q11HQ3 50S ribosomal protein L41.3e-3746.04Show/hide
Query:  IPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNK
        + VT    +D G + ++ ++F L  R+DI+HRVVRWQLAKRQQGTH  K  +E++ TG K + QKGTGRARH + R PQFRGG   HGP P SHA  L K
Subjt:  IPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNK

Query:  KVRRLGLMIALSARA---------------AEGKA---------------VDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERIV
        KVR LGL  ALSA+A               A+ KA               + G  ID   K A  N+  ++VLP  G+NVYDIL   TLV+S+ AVE + 
Subjt:  KVRRLGLMIALSARA---------------AEGKA---------------VDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERIV

Query:  TR
         R
Subjt:  TR

Q2RQW1 50S ribosomal protein L47.8e-4347.26Show/hide
Query:  VTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKV
        V   + +D G + L+  VF LP+R D++HR+VRWQLA+RQ GTH TK ISE+SGT  KP+ QKGTG AR G+ R PQFRGGAT+ GP  RSHA  LNKKV
Subjt:  VTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKV

Query:  RRLGLMIALSARAAEGKA------------------------------VDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERIVTR
        R+LGL  ALSA+A  G+                               +DG  ++EK  LA +N+  ++VLP  G NVYDIL  DTLV++++AV+ +  R
Subjt:  RRLGLMIALSARAAEGKA------------------------------VDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERIVTR

Query:  M
        +
Subjt:  M

Q2W2J2 50S ribosomal protein L45.0e-4246.77Show/hide
Query:  VTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKV
        V + +N+  G + LA ++F +P+R DI+ R V WQLAKRQ G H TKTISE+SGT +KP+ QKG GRAR G+LR  QFRGG+T+ GP  RSHA  L KKV
Subjt:  VTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKV

Query:  RRLGLMIALSARAAEGKA------------------------------VDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERIVTR
        R+L L  ALSA+ A+GK                               +DG  +D    LA++N+ YV+VLP+ G NVYDIL  DTLV+++DAV  +  R
Subjt:  RRLGLMIALSARAAEGKA------------------------------VDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERIVTR

Query:  M
        +
Subjt:  M

Q5FTY4 50S ribosomal protein L43.4e-3845.23Show/hide
Query:  VTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKV
        +   +N   G + L  ++F +  R DI+ RVV WQLAKR+ GTH TK + E+SGT +KP+ QKGTG AR G+LR PQFR G  +HGP  R H + L KKV
Subjt:  VTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKV

Query:  RRLGLMIALSARAAEGK-----AVDG-----------------------GPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERIVTRM
        RRLGL+ ALS +AAEGK     A +G                       G +DE+   A  NL  ++VLP+IG NVYDIL HD LV++R  +E +  R+
Subjt:  RRLGLMIALSARAAEGK-----AVDG-----------------------GPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERIVTRM

Arabidopsis top hitse value%identityAlignment
AT1G07320.1 ribosomal protein L42.6e-1730.43Show/hide
Query:  IPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNK
        +P+ +FE E  G   L          + ++HR +   L  +++GT ST T  EV G G KP++QK TG AR G+ R P   GG  + GP+P+  + K+N+
Subjt:  IPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNK

Query:  KVRRLGLMIAL-SARAAEGKAV---DGG-------------------------------PIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDA
        K ++L +  AL SA +AEG A+   + G                                +DE +  +++N+  + +L    LN++DIL  D LV++  A
Subjt:  KVRRLGLMIAL-SARAAEGKAV---DGG-------------------------------PIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDA

Query:  VERIVTR
        VE +  R
Subjt:  VERIVTR

AT1G07320.2 ribosomal protein L42.6e-1730.43Show/hide
Query:  IPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNK
        +P+ +FE E  G   L          + ++HR +   L  +++GT ST T  EV G G KP++QK TG AR G+ R P   GG  + GP+P+  + K+N+
Subjt:  IPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNK

Query:  KVRRLGLMIAL-SARAAEGKAV---DGG-------------------------------PIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDA
        K ++L +  AL SA +AEG A+   + G                                +DE +  +++N+  + +L    LN++DIL  D LV++  A
Subjt:  KVRRLGLMIAL-SARAAEGKAV---DGG-------------------------------PIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDA

Query:  VERIVTR
        VE +  R
Subjt:  VERIVTR

AT1G07320.3 ribosomal protein L42.6e-1730.43Show/hide
Query:  IPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNK
        +P+ +FE E  G   L          + ++HR +   L  +++GT ST T  EV G G KP++QK TG AR G+ R P   GG  + GP+P+  + K+N+
Subjt:  IPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNK

Query:  KVRRLGLMIAL-SARAAEGKAV---DGG-------------------------------PIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDA
        K ++L +  AL SA +AEG A+   + G                                +DE +  +++N+  + +L    LN++DIL  D LV++  A
Subjt:  KVRRLGLMIAL-SARAAEGKAV---DGG-------------------------------PIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDA

Query:  VERIVTR
        VE +  R
Subjt:  VERIVTR

AT1G07320.4 ribosomal protein L42.6e-1730.43Show/hide
Query:  IPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNK
        +P+ +FE E  G   L          + ++HR +   L  +++GT ST T  EV G G KP++QK TG AR G+ R P   GG  + GP+P+  + K+N+
Subjt:  IPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNK

Query:  KVRRLGLMIAL-SARAAEGKAV---DGG-------------------------------PIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDA
        K ++L +  AL SA +AEG A+   + G                                +DE +  +++N+  + +L    LN++DIL  D LV++  A
Subjt:  KVRRLGLMIAL-SARAAEGKAV---DGG-------------------------------PIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDA

Query:  VERIVTR
        VE +  R
Subjt:  VERIVTR

AT2G20060.1 Ribosomal protein L4/L1 family1.9e-9762.34Show/hide
Query:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAG-SFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIG
        MA S+SRR+ R+  S S  G+ +S  + + +         S NG++S+    +  LK G + L++R L TS LTP+ S   FPS+LL+ K V+  +R IG
Subjt:  MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAG-SFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIG

Query:  LLQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSH
          QDL+IPVTNF+NE+KGFMVLAGDVFD+PIRKDIIH VVRWQLAKRQQGTHSTKT+SEVSGTGRKPWNQKGTGRARHGTLRGPQFRGG  MHGPKPRSH
Subjt:  LLQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSH

Query:  AFKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSR
        A K+NK+VRRLGL IAL+ARAAEGK                                V+GGPIDEKLKLATQNLHYVN++PSIGLNVY ILLHDTL+MSR
Subjt:  AFKLNKKVRRLGLMIALSARAAEGK-------------------------------AVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSR

Query:  DAVERIVTRMHTPISR
        DAV +IV RMHTPI+R
Subjt:  DAVERIVTRMHTPISR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATCTCAGTGTCGAGAAGGCTGTTGCGCTCTATGAGGTCCTTATCAACATTTGGGCAATGTAATTCTTCGTGTATTATGAGTCAGTCATTTTATAATTCCCATGA
AATTTATGGCAGTGTTAATGGGATTAGCTCTATGTTTGCGGGCGGTTCTACCCTTTTGAAGGCTGGATCCTTTCTTGCTTCCCGAGGGTTGTGCACCTCAAATTTGACTC
CTGAATCAAGCAATGCTGCATTTCCTTCTGAGTTACTGTCCACTAAGCCGGTGGTATTAGAAGAGCGCAAGATAGGACTTCTTCAGGACCTGATGATTCCTGTGACGAAC
TTTGAAAATGAAGACAAAGGCTTCATGGTCTTGGCTGGAGATGTTTTTGACCTTCCAATCAGGAAGGACATCATTCATCGGGTTGTTAGATGGCAGCTTGCAAAGAGACA
GCAGGGAACACATTCGACAAAAACAATTAGTGAGGTTAGTGGAACAGGAAGAAAGCCATGGAATCAAAAAGGTACTGGCAGGGCGAGGCATGGAACACTGCGTGGTCCCC
AGTTCAGAGGTGGTGCAACTATGCATGGTCCTAAACCACGAAGTCATGCTTTTAAGCTTAATAAGAAAGTTCGTCGCTTGGGTTTGATGATTGCTCTTTCAGCTCGTGCT
GCAGAAGGAAAGGCAGTTGATGGTGGCCCCATAGATGAGAAGCTGAAGTTGGCCACGCAGAACCTTCATTACGTCAATGTTTTGCCTTCTATAGGGTTGAACGTTTATGA
CATTCTTCTACATGATACTCTTGTGATGTCTCGTGATGCTGTAGAAAGAATTGTTACCCGGATGCACACTCCAATCAGCCGCTGA
mRNA sequenceShow/hide mRNA sequence
AGGGCTTCGAGGTTTCGTTTTCCAAGAATGCGAAAAAAGGTCGACCATGTAAAAGGGTTTACATCACACCACGAAGAAAGGCCCAAATTTGAAGTTCGAATTCGTTAAGA
AGAATGGAGGTGGCCCAAATTGTGGTATCTGCATCCAGTCCGGCCTGTTAATGCCTTCGGTTTCAGCATCTCTTTTTGTTCTTCGTCTCCCTCGCAAAGCTTTGCGCATC
CCCACATTACCAGCCACTGCAGCGCCGCTCTTTCCGGCCGCCGTCTCCGCTGCTGCAGCCGCCGCGCGCTGCACTCTTAGTCTTACGAGGAAATCTCCGTCGCCCCTCTC
TCTCGCACTCTCTCGCTCTTCGAGCTATCAGAGTTCCTTCTCTCTGTTTTCCTTTCTCTCAGAAACACAGTGGTTCAGAACCTCGCCGTTGTTGATATTGTGCCGCTGAC
GTTCATCTTTCAGATCCCCAAGATGACTAGGTAGCTGTCTGATTGTTGCAATACCACTGCACCGATTCTTTTAGCGGTACGCTTTTAATATGGCAATCTCAGTGTCGAGA
AGGCTGTTGCGCTCTATGAGGTCCTTATCAACATTTGGGCAATGTAATTCTTCGTGTATTATGAGTCAGTCATTTTATAATTCCCATGAAATTTATGGCAGTGTTAATGG
GATTAGCTCTATGTTTGCGGGCGGTTCTACCCTTTTGAAGGCTGGATCCTTTCTTGCTTCCCGAGGGTTGTGCACCTCAAATTTGACTCCTGAATCAAGCAATGCTGCAT
TTCCTTCTGAGTTACTGTCCACTAAGCCGGTGGTATTAGAAGAGCGCAAGATAGGACTTCTTCAGGACCTGATGATTCCTGTGACGAACTTTGAAAATGAAGACAAAGGC
TTCATGGTCTTGGCTGGAGATGTTTTTGACCTTCCAATCAGGAAGGACATCATTCATCGGGTTGTTAGATGGCAGCTTGCAAAGAGACAGCAGGGAACACATTCGACAAA
AACAATTAGTGAGGTTAGTGGAACAGGAAGAAAGCCATGGAATCAAAAAGGTACTGGCAGGGCGAGGCATGGAACACTGCGTGGTCCCCAGTTCAGAGGTGGTGCAACTA
TGCATGGTCCTAAACCACGAAGTCATGCTTTTAAGCTTAATAAGAAAGTTCGTCGCTTGGGTTTGATGATTGCTCTTTCAGCTCGTGCTGCAGAAGGAAAGGCAGTTGAT
GGTGGCCCCATAGATGAGAAGCTGAAGTTGGCCACGCAGAACCTTCATTACGTCAATGTTTTGCCTTCTATAGGGTTGAACGTTTATGACATTCTTCTACATGATACTCT
TGTGATGTCTCGTGATGCTGTAGAAAGAATTGTTACCCGGATGCACACTCCAATCAGCCGCTGAAGCCGCATTGCATTTCTCCTGAATTCTATGTGCAACTTCAGTTTTA
GATCAGATCAGCAATAACCTTTATTGATATTTTCCCCCTTTTGTTGCAGGAAGGGGTGAAAACCTGTTTGTTGTTAACGTTAAAATATTGATCACAGTGGAGTTTGAAAT
TTTCCCTTGTACTGATTGAAGGCATCGGATAGTAAGTTGTGAAGCTGTAGTTTGTGGTGTTCGAAAATAACAAAAAGAACCATTCTCACTGGCAGATTGTCAAGTTTTGC
TATTCTTTCTTTTACATGTCAAAATTCTTCTGTTTTGATATGATGATATGATGATATGTTGATGTGATGGATGATTTACAACTTTAAAAACCGC
Protein sequenceShow/hide protein sequence
MAISVSRRLLRSMRSLSTFGQCNSSCIMSQSFYNSHEIYGSVNGISSMFAGGSTLLKAGSFLASRGLCTSNLTPESSNAAFPSELLSTKPVVLEERKIGLLQDLMIPVTN
FENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKVRRLGLMIALSARA
AEGKAVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRDAVERIVTRMHTPISR