CuGenDBv2

Gene ID	Lsi01G004580
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr01:3814639..3816211
RNA-Seq Expression	Lsi01G004580
Synteny	Lsi01G004580
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

TYK13019.1 uncharacterized protein E5676_scaffold255G006190 [Cucumis melo var. makuwa]

7.2e-60

90.48

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Query:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE
        MEEQTGGTKPIKC  +QKRQKYGSDGAGFSTG+ PIGN DAPPH EDEDSHISTSEDSGSSGEE RLSGLAESLQILTKSLLTAEMEIFKA E IRLEEE
Subjt:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE

Query:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS
        +RRLESEAEMTRMLLQCQLQIASF+SA  SPNNRKRKRVQEEDPSSS
Subjt:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS

XP_004134781.1 uncharacterized protein LOC101203124 [Cucumis sativus]

5.5e-60

91.16

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Query:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE
        MEEQTGGTKPIKC D+QKRQKYGSDGAGFSTG+ PIGNSD  PH EDE SHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKA EV+RLEEE
Subjt:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE

Query:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS
        KRRLESEAEMTRMLLQCQLQIASF+SAR+SPNNRKRKRV+EEDPSSS
Subjt:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS

XP_008440047.1 PREDICTED: uncharacterized protein LOC103484640 [Cucumis melo]

1.2e-57

88.44

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Query:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE
        MEEQTGGTKPIKC  +QKRQKYGSDGAGFSTG+ PIGN DAPPH EDEDSHISTSEDSGSSGEE RLSGLAESLQILTKSLLTAEMEIFKA E IRLEEE
Subjt:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE

Query:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS
        +RRLESE EMT MLLQCQLQIASF+SA  SPN RKRKRVQEEDPSSS
Subjt:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS

XP_023544081.1 uncharacterized protein LOC111803775 [Cucurbita pepo subsp. pepo]

1.2e-54

85.71

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Query:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE
        MEE TGGTKPIKCS++QKRQKYG   AG S+ E  IGNSDAPPH E E SHIST EDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKA EVIRLEEE
Subjt:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE

Query:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS
        KRRLESEAEMTRMLLQCQ+QIASF+SARQ PNNRKRKRVQEE+PS S
Subjt:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS

XP_038882486.1 uncharacterized protein LOC120073739 [Benincasa hispida]

1.1e-63

93.2

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Query:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE
        MEEQTGGTKPIKCSD+QKRQKYGSDGAG STGE PIGNSDAPPHPEDEDSHISTSE SGSSG+ETRL+GLAESLQILT+SLLTAEMEIFKA E+IRLEEE
Subjt:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE

Query:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS
        KRRLESEAEMTRMLLQCQLQIASF+SARQSPNNRKRKRVQEEDPSSS
Subjt:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHR9 Uncharacterized protein

2.7e-60

91.16

Show/hide

Query:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE
        MEEQTGGTKPIKC D+QKRQKYGSDGAGFSTG+ PIGNSD  PH EDE SHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKA EV+RLEEE
Subjt:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE

Query:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS
        KRRLESEAEMTRMLLQCQLQIASF+SAR+SPNNRKRKRV+EEDPSSS
Subjt:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS

A0A1S3AZS4 uncharacterized protein LOC103484640

5.6e-58

88.44

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Query:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE
        MEEQTGGTKPIKC  +QKRQKYGSDGAGFSTG+ PIGN DAPPH EDEDSHISTSEDSGSSGEE RLSGLAESLQILTKSLLTAEMEIFKA E IRLEEE
Subjt:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE

Query:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS
        +RRLESE EMT MLLQCQLQIASF+SA  SPN RKRKRVQEEDPSSS
Subjt:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS

A0A5D3CRX4 Uncharacterized protein

3.5e-60

90.48

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Query:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE
        MEEQTGGTKPIKC  +QKRQKYGSDGAGFSTG+ PIGN DAPPH EDEDSHISTSEDSGSSGEE RLSGLAESLQILTKSLLTAEMEIFKA E IRLEEE
Subjt:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE

Query:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS
        +RRLESEAEMTRMLLQCQLQIASF+SA  SPNNRKRKRVQEEDPSSS
Subjt:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS

A0A6J1GEE5 uncharacterized protein At4g22160

1.9e-53

83.67

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Query:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE
        MEE TGGTKPIKCS++QKRQKYG   AG S+ E  IGNSDAPPH E E SHIST EDSGSSGEET LSGLAESLQILTKSLLTAEMEIF+A E IRLEEE
Subjt:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE

Query:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS
        KRRLESEAEMTRMLLQCQ+QIASF+SARQ PNNRKRKRVQEE+PS S
Subjt:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS

A0A6J1IKP0 uncharacterized protein LOC111477923

6.4e-54

84.35

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Query:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE
        MEE TGGTKPIKCS++QK QKYG   AG S+ E  IGNSDAPPH E E SHIST EDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKA E IRLEEE
Subjt:  MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEE

Query:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS
        KRRLESEAEMTRMLLQCQ+QIASF+SARQ PNNRKRKRVQEE+PS S
Subjt:  KRRLESEAEMTRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSS

SwissProt top hits

e value

%identity

Alignment

Q8L8L9 Uncharacterized protein At4g22160

5.7e-07

37.9

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Query:  NSDAPPHPEDE-DSHISTSEDSGSSGEETRLSGLAESLQILTKSLL---TAEMEIFKAMEVIRLEEEKRRLESEAEMTRMLLQCQLQIASFV-----SAR
        +SD P   + E +S+ S+  +S  S + T  +G++  +++L+ SLL    AEME+ KA E  RLE EKRRLE E ++T+M+LQ  LQ  S +        
Subjt:  NSDAPPHPEDE-DSHISTSEDSGSSGEETRLSGLAESLQILTKSLL---TAEMEIFKAMEVIRLEEEKRRLESEAEMTRMLLQCQLQIASFV-----SAR

Query:  QSPNNRKRKRVQEEDPSSSERGSA
        Q+   RKR  V+E + S+ E+  A
Subjt:  QSPNNRKRKRVQEEDPSSSERGSA

Arabidopsis top hits

e value

%identity

Alignment

AT4G22160.1 unknown protein

9.0e-08

39.5

Show/hide

Query:  NSDAPPHPEDE-DSHISTSEDSGSSGEETRLSGLAESLQILTKSLL---TAEMEIFKAMEVIRLEEEKRRLESEAEMTRMLLQCQLQIASFVSARQS---
        +SD P   + E +S+ S+  +S  S + T  +G++  +++L+ SLL    AEME+ KA E  RLE EKRRLE E ++T+M+LQ  LQ  S +   +    
Subjt:  NSDAPPHPEDE-DSHISTSEDSGSSGEETRLSGLAESLQILTKSLL---TAEMEIFKAMEVIRLEEEKRRLESEAEMTRMLLQCQLQIASFVSARQS---

Query:  PNNRKRKRVQEEDPSSSER
           RKRKR   E+  SS R
Subjt:  PNNRKRKRVQEEDPSSSER

AT4G22160.2 unknown protein

4.0e-08

37.9

Show/hide

Query:  NSDAPPHPEDE-DSHISTSEDSGSSGEETRLSGLAESLQILTKSLL---TAEMEIFKAMEVIRLEEEKRRLESEAEMTRMLLQCQLQIASFV-----SAR
        +SD P   + E +S+ S+  +S  S + T  +G++  +++L+ SLL    AEME+ KA E  RLE EKRRLE E ++T+M+LQ  LQ  S +        
Subjt:  NSDAPPHPEDE-DSHISTSEDSGSSGEETRLSGLAESLQILTKSLL---TAEMEIFKAMEVIRLEEEKRRLESEAEMTRMLLQCQLQIASFV-----SAR

Query:  QSPNNRKRKRVQEEDPSSSERGSA
        Q+   RKR  V+E + S+ E+  A
Subjt:  QSPNNRKRKRVQEEDPSSSERGSA

Sequences

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CDS sequence

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mRNA sequence

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ATGGAAGAGCAGACAGGTGGAACCAAACCGATCAAGTGCAGCGACAACCAGAAACGTCAAAAATATGGAAGTGATGGAGCAGGATTCTCAACCGGCGAGCATCCGATTGG
GAATTCCGATGCTCCTCCACATCCTGAGGATGAAGATTCCCATATTTCCACAAGTGAAGATTCGGGAAGTTCCGGCGAGGAAACACGGTTGTCCGGCCTGGCAGAGAGCC
TGCAAATCTTAACAAAGTCGCTGCTGACGGCGGAAATGGAGATTTTCAAGGCGATGGAGGTCATCCGCCTTGAGGAGGAAAAGAGGAGGCTGGAATCGGAGGCCGAGATG
ACTCGGATGCTGCTCCAGTGTCAGCTGCAAATCGCCTCGTTTGTATCGGCCAGGCAGAGTCCCAACAACCGGAAAAGGAAGCGAGTTCAGGAAGAAGATCCATCCTCTTC
GGAACGGGGCTCTGCTGCTAAGTCTAATTCAACTCAACATGATCAGCTTTTGAAGCTGCTATGCTATGGTTTAAATGGGAATCGTAGGAGTATACGATAAGTGTAACTGT
ATCGATCACCGAAGCACGGTATTGATCGATTTGTTGAATTTTCTTTTCCATTTCTATCTAAATTCTATGAGTTATGACTACTTCATTGGCATATAAAAAGCCTAGCAAGA
AAGATCGTTTCGAGCTAAGTAGTAGGTAGCTGAGTCGATTAAGATAATCAAGCTAATTGAGTTTTCTTCGTGCGGATGTTGGAGTCCTTGATTTCATGGTCATCAATAGT
TTGCAAAGCCTTGCGCCTGCTCATGGCACACTCGATATATTCTTCAAGGGGTGGAAGTATTCCATGTTCTCCAGTTTTCGATACTTTCCCTCGAATTATCTGTAAAAAGA
AACCCAGAAAGAGAGGTTATACTTATGGCCACCAAAAAGGAACTCTAGGATCGATGAAATAAAGGACGGGTAGTTTGCCTTTGATGCCCATGAACGCTCGGCTTGCTGAC
AAATATCCCTGATGTCCCTTCCAGACATTCTGAAAATACATGCGAAGCGAAGCAAAAAGACAGTAGATTTAGAGATTGTTACAACTACATCCCTAGAAACAAAGAAGTCG
ACAAAACTATATTCTAGTGAGAGAGGCTTGTATTGTATGTGGACCATTAGCAGAATAGCAGACAAATACGAACAATGCCTAGACTACCGAAAGAAATCATATGTAGTTAC
GGGCCTACGATTAACTTACCCTTCTGTGTTTCTGGCGAACTCGCTCAATTCAGGTTTCGTTAGCTGCTTTGCATACTGAGCTGCTATTTCCTCCCGGTTCCGCTCATCAG
GTAACCCAAATGTGATCATCAAGTCAAACCGACTAAACGAAAATTCAGGAAAAGAAATTAGTTCAGAAACCCAGCAACTTAGCATTCGGTTTTGTGCGCGCGCTCTTCTT
CTTTTAATGCACATCGCAATCAATGTCGATAAATTTTTTTTTTAG

Protein sequence

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MEEQTGGTKPIKCSDNQKRQKYGSDGAGFSTGEHPIGNSDAPPHPEDEDSHISTSEDSGSSGEETRLSGLAESLQILTKSLLTAEMEIFKAMEVIRLEEEKRRLESEAEM
TRMLLQCQLQIASFVSARQSPNNRKRKRVQEEDPSSSERGSAAKSNSTQHDQLLKLLCYGLNGNRRSIR

Lsi01G004580 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome