CuGenDBv2

Gene ID	Lsi01G004590
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	AAA domain-containing protein
Genome location	chr01:3813702..3819354
RNA-Seq Expression	Lsi01G004590
Synteny	Lsi01G004590
Gene Ontology terms	GO:0030433 - ubiquitin-dependent ERAD pathway (biological process) GO:0045899 - positive regulation of RNA polymerase II transcriptional preinitiation complex assembly (biological process) GO:0008540 - proteasome regulatory particle, base subcomplex (cellular component) GO:0031597 - cytosolic proteasome complex (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function) GO:0036402 - proteasome-activating ATPase activity (molecular function)
InterPro domains	IPR003593 - AAA+ ATPase domain IPR003959 - ATPase, AAA-type, core IPR003960 - ATPase, AAA-type, conserved site IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008440042.1 PREDICTED: katanin p60 ATPase-containing subunit A1 isoform X1 [Cucumis melo]

6.7e-95

76.59

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA
        GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFS+ANELSTGAIIFLDE                          IDGFEQDRKV+VIAA
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA

Query:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI
        TNRKQDLDPALISRFDLMITFGLPDERNREEIA QYAKQLTKPEL EFARNT+GMSGRDIRDICQQAERSWASK                         I
Subjt:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI

Query:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA
        IRGKVSKTGEHGILPP+EEYIECAM RRKALQTIDDHEIKD NIRTKKTQLA
Subjt:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA

XP_008440044.1 PREDICTED: katanin p60 ATPase-containing subunit A1 isoform X3 [Cucumis melo]

6.7e-95

76.59

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA
        GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFS+ANELSTGAIIFLDE                          IDGFEQDRKV+VIAA
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA

Query:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI
        TNRKQDLDPALISRFDLMITFGLPDERNREEIA QYAKQLTKPEL EFARNT+GMSGRDIRDICQQAERSWASK                         I
Subjt:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI

Query:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA
        IRGKVSKTGEHGILPP+EEYIECAM RRKALQTIDDHEIKD NIRTKKTQLA
Subjt:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA

XP_008440046.1 PREDICTED: probable 26S protease regulatory subunit 10B isoform X5 [Cucumis melo]

6.7e-95

76.59

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA
        GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFS+ANELSTGAIIFLDE                          IDGFEQDRKV+VIAA
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA

Query:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI
        TNRKQDLDPALISRFDLMITFGLPDERNREEIA QYAKQLTKPEL EFARNT+GMSGRDIRDICQQAERSWASK                         I
Subjt:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI

Query:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA
        IRGKVSKTGEHGILPP+EEYIECAM RRKALQTIDDHEIKD NIRTKKTQLA
Subjt:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA

XP_038882484.1 26S proteasome subunit RPT4 isoform X1 [Benincasa hispida]

1.4e-95

77.78

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA
        GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFS+ANELSTGAIIFLDE                          IDGFEQDRKVVVIAA
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA

Query:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI
        TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPEL+EFARNTEGMSGRDIRDICQQAERSWASK                         I
Subjt:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI

Query:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA
        IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTID+HEIKD N RTKKTQLA
Subjt:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA

XP_038882485.1 ATPase family AAA domain-containing protein 1-B isoform X2 [Benincasa hispida]

1.4e-95

77.78

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA
        GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFS+ANELSTGAIIFLDE                          IDGFEQDRKVVVIAA
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA

Query:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI
        TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPEL+EFARNTEGMSGRDIRDICQQAERSWASK                         I
Subjt:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI

Query:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA
        IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTID+HEIKD N RTKKTQLA
Subjt:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AZS0 katanin p60 ATPase-containing subunit A1 isoform X1

3.3e-95

76.59

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA
        GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFS+ANELSTGAIIFLDE                          IDGFEQDRKV+VIAA
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA

Query:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI
        TNRKQDLDPALISRFDLMITFGLPDERNREEIA QYAKQLTKPEL EFARNT+GMSGRDIRDICQQAERSWASK                         I
Subjt:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI

Query:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA
        IRGKVSKTGEHGILPP+EEYIECAM RRKALQTIDDHEIKD NIRTKKTQLA
Subjt:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA

A0A1S3B059 katanin p60 ATPase-containing subunit A1 isoform X3

3.3e-95

76.59

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA
        GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFS+ANELSTGAIIFLDE                          IDGFEQDRKV+VIAA
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA

Query:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI
        TNRKQDLDPALISRFDLMITFGLPDERNREEIA QYAKQLTKPEL EFARNT+GMSGRDIRDICQQAERSWASK                         I
Subjt:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI

Query:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA
        IRGKVSKTGEHGILPP+EEYIECAM RRKALQTIDDHEIKD NIRTKKTQLA
Subjt:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA

A0A1S3B076 probable 26S protease regulatory subunit 10B isoform X2

3.3e-95

76.59

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA
        GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFS+ANELSTGAIIFLDE                          IDGFEQDRKV+VIAA
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA

Query:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI
        TNRKQDLDPALISRFDLMITFGLPDERNREEIA QYAKQLTKPEL EFARNT+GMSGRDIRDICQQAERSWASK                         I
Subjt:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI

Query:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA
        IRGKVSKTGEHGILPP+EEYIECAM RRKALQTIDDHEIKD NIRTKKTQLA
Subjt:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA

A0A1S3B0X9 probable 26S protease regulatory subunit 10B isoform X5

3.3e-95

76.59

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA
        GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFS+ANELSTGAIIFLDE                          IDGFEQDRKV+VIAA
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA

Query:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI
        TNRKQDLDPALISRFDLMITFGLPDERNREEIA QYAKQLTKPEL EFARNT+GMSGRDIRDICQQAERSWASK                         I
Subjt:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI

Query:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA
        IRGKVSKTGEHGILPP+EEYIECAM RRKALQTIDDHEIKD NIRTKKTQLA
Subjt:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA

A0A6J1IN26 ATPase family AAA domain-containing protein 1-B isoform X3

9.5e-95

75.79

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA
        GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLG+VFS+ANELSTGAIIFLDE                          IDGFEQDRKVVVIAA
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA

Query:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI
        TNRKQDLDPALISRFDLMITFGLPDERNR+EIAAQYAKQLTKPEL+EFA+NTEGMSGRDIRDICQQAERSWASK                         I
Subjt:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI

Query:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA
        +RGKVSKTGEHGILPPL+EYIECAMSRRKALQT+DDH+IKDSNIRTKKTQ A
Subjt:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQLA

SwissProt top hits

e value

%identity

Alignment

P28737 Outer mitochondrial transmembrane helix translocase

3.4e-17

32.56

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEIDGFEQDR--------------------------KVVVIAA
        G GKT  A+ +A ++G   + + +  IM K+YGES +++  +FS+AN+L    IIF+DEID F ++R                          +V++I A
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEIDGFEQDR--------------------------KVVVIAA

Query:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEF-----ARNTEGMSGRDIRDICQQA
        TNR  D+D A + R        LP    R +I +   K  TK +  EF     A NT+G SG D++++C++A
Subjt:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEF-----ARNTEGMSGRDIRDICQQA

Q503W7 Outer mitochondrial transmembrane helix translocase

4.5e-17

32.56

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEIDGFEQDR----------------------------KVVVI
        G GKT  A+  A +AG   + +    +  K+YGES++L   VFS+A +L   +IIF+DEID F ++R                            +V+++
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEIDGFEQDR----------------------------KVVVI

Query:  AATNRKQDLDPALISRFDLMITFGLPDERNREEI---AAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQA
         ATNR QDLD A++ R         P+ R R++I     +     +  ELSE A+ T+G SG D+R++C+ A
Subjt:  AATNRKQDLDPALISRFDLMITFGLPDERNREEI---AAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQA

Q58556 Cell division cycle protein 48 homolog MJ1156

3.1e-18

35.84

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEI---------------------------DGFEQDRKVVVIA
        GTGKT  A+ +AN++G   + V    I SK+ GESE+ + ++F  A + S   IIF DEI                           DG E+ + VVVIA
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEI---------------------------DGFEQDRKVVVIA

Query:  ATNRKQDLDPALI--SRFDLMITFGLPDERNREEIAAQYAKQLTKPE---LSEFARNTEGMSGRDIRDICQQA
        ATNR   +DPAL+   R D +I   +PDE+ R +I   + + +   E   L E A+ TEG +G DI  +C++A
Subjt:  ATNRKQDLDPALI--SRFDLMITFGLPDERNREEIAAQYAKQLTKPE---LSEFARNTEGMSGRDIRDICQQA

Q5AWS6 Cell division control protein 48

2.9e-16

36.63

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEI--------------------------DGFEQDRKVVVIAA
        GTGKT  AR +AN+ G     +    IMSK  GESE  L K F  A E ++ AIIF+DEI                          DG +    VVV+AA
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEI--------------------------DGFEQDRKVVVIAA

Query:  TNRKQDLDPAL--ISRFDLMITFGLPDERNREEIAAQYAKQLTKPE---LSEFARNTEGMSGRDIRDICQQA
        TNR   +DPAL    RFD  +  G+PD   R EI + + K +   E   L   A  T G  G D+  +C +A
Subjt:  TNRKQDLDPAL--ISRFDLMITFGLPDERNREEIAAQYAKQLTKPE---LSEFARNTEGMSGRDIRDICQQA

Q8TX03 Proteasome-activating nucleotidase

1.2e-17

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEI-----------------------------DGFEQDRKVVV
        GTGKT  A+ +AN A    + +    ++ K+ GE  RL+ ++F +A E    +IIF+DEI                             DGF+    + V
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEI-----------------------------DGFEQDRKVVV

Query:  IAATNRKQDLDPALI--SRFDLMITFGLPDERNREEIAAQYAKQLTKPE---LSEFARNTEGMSGRDIRDICQQA
        IAATNRK  LDPAL+   RFD  I   LPDE  R EI   + + +   E   L + A+ TEG SG DI+ IC +A
Subjt:  IAATNRKQDLDPALI--SRFDLMITFGLPDERNREEIAAQYAKQLTKPE---LSEFARNTEGMSGRDIRDICQQA

Arabidopsis top hits

e value

%identity

Alignment

AT1G64110.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

8.4e-19

34.68

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEIDGFEQDR-----------------------------KVVV
        GTGKT  A+ IA +AG   + V +  I SK++GE E+ +  +F++A+++S   IIF+DE+D     R                             +++V
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEIDGFEQDR-----------------------------KVVV

Query:  IAATNRKQDLDPALISRFDLMITFGLPDERNREEI-AAQYAKQLTKPEL--SEFARNTEGMSGRDIRDICQQA
        +AATNR  DLD A+I RF+  I  GLP   NRE+I     AK+     L   E A  TEG +G D++++C  A
Subjt:  IAATNRKQDLDPALISRFDLMITFGLPDERNREEI-AAQYAKQLTKPEL--SEFARNTEGMSGRDIRDICQQA

AT1G64110.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein

8.4e-19

34.68

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEIDGFEQDR-----------------------------KVVV
        GTGKT  A+ IA +AG   + V +  I SK++GE E+ +  +F++A+++S   IIF+DE+D     R                             +++V
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEIDGFEQDR-----------------------------KVVV

Query:  IAATNRKQDLDPALISRFDLMITFGLPDERNREEI-AAQYAKQLTKPEL--SEFARNTEGMSGRDIRDICQQA
        +AATNR  DLD A+I RF+  I  GLP   NRE+I     AK+     L   E A  TEG +G D++++C  A
Subjt:  IAATNRKQDLDPALISRFDLMITFGLPDERNREEI-AAQYAKQLTKPEL--SEFARNTEGMSGRDIRDICQQA

AT4G04180.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

1.7e-64

54.98

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Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA
        GTGKTS ARVIANQAG+PL+YVPLE +MSKYYGESERLLG VFS ANEL  GAIIFLDE                          IDGFEQ++KVVVIAA
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDE--------------------------IDGFEQDRKVVVIAA

Query:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI
        TNRKQDLDPALISRFD MI F LPD + R+EI AQYAKQL+KPEL + A+ TE MSGRDIRD+CQ AER+WASK                 + Y +   I
Subjt:  TNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWI

Query:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQL
         R K     +   LPP++EY+E A +RRK+L+++ + + +    R+KK  L
Subjt:  IRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIRTKKTQL

AT4G27680.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

4.9e-19

34.3

Show/hide

Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEI--------------------------DGFEQD--RKVVVI
        GTGKT  A+ IA ++G   + V +  +MSK++G++++L+  VFS+A +L   AIIF+DE+                          DGF  D   +V+V+
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEI--------------------------DGFEQD--RKVVVI

Query:  AATNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAK-QLTKPEL--SEFARNTEGMSGRDIRDICQQA
        AATNR  +LD A++ R       G+PD R R EI     K +  +P++     AR  EG +G DI ++C++A
Subjt:  AATNRKQDLDPALISRFDLMITFGLPDERNREEIAAQYAK-QLTKPEL--SEFARNTEGMSGRDIRDICQQA

AT4G28000.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

3.8e-19

34.3

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Query:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEIDGFEQDR-----------------------------KVVV
        GTGKT  A+ IAN+AG   + V +  I SK++GE E+ +  +F++A ++S   IIF+DE+D     R                             +++V
Subjt:  GTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEIDGFEQDR-----------------------------KVVV

Query:  IAATNRKQDLDPALISRFDLMITFGLPDERNREEI-AAQYAKQLTKP-ELSEFARNTEGMSGRDIRDICQQA
        +AATNR  DLD A+I RF+  I  GLP   +RE+I     +K+ T+  +  E A+ T+G SG D+++ C  A
Subjt:  IAATNRKQDLDPALISRFDLMITFGLPDERNREEI-AAQYAKQLTKP-ELSEFARNTEGMSGRDIRDICQQA

Sequences

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CDS sequence

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mRNA sequence

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ATGGGTACCGGTAAAACATCGTCTGCTCGTGTAATTGCAAATCAAGCTGGCGTCCCGTTGGTGTATGTACCACTTGAGGTTATCATGTCGAAGTACTATGGTGAAAGTGA
ACGGCTATTGGGAAAAGTGTTTTCAATTGCTAATGAACTCAGTACCGGTGCTATCATTTTCCTAGACGAGATCGATGGATTCGAGCAGGACAGGAAAGTGGTTGTAATTG
CTGCTACGAATAGAAAGCAAGACCTTGATCCTGCTTTAATTAGTCGGTTTGACTTGATGATCACATTTGGGTTACCTGATGAGCGGAACCGGGAGGAAATAGCAGCTCAG
TATGCAAAGCAGCTAACGAAACCTGAATTGAGCGAGTTCGCCAGAAACACAGAAGGAATGTCTGGAAGGGACATCAGGGATATTTGTCAGCAAGCCGAGCGTTCATGGGC
ATCAAAGGCAAACTACCCGTCCTTTATTTCATCGATCCTAGAGTTCCTTTTTGGTGGCCATAAGTATAACCTCTCTTTCTGGATAATTCGAGGGAAAGTATCGAAAACTG
GAGAACATGGAATACTTCCACCCCTTGAAGAATATATCGAGTGTGCCATGAGCAGGCGCAAGGCTTTGCAAACTATTGATGACCATGAAATCAAGGACTCCAACATCCGC
ACGAAGAAAACTCAATTAGCTTGATTATCTTAATCGACTCAGCTACCTACTACTTAGCTCGAAACGATCTTTCTTGCTAGGCTTTTTATATGCCAATGAAGTAGTCATAA
CTCATAGAATTTAGATAGAAATGGAAAAGAAAATTCAACAAATCGATCAATACCGTGCTTCGGTGATCGATACAGTTACACTTATCGTATACTCCTACGATTCCCATTTA
AACCATAGCATAGCAGCTTCAAAAGCTGATCATGTTGAGTTGAATTAGACTTAGCAGCAGAGCCCCGTTCCTGTATCAATCAACAAGATCAGATCATATAACAGTTTATA
ACTTGTTGCTGATTGGCTAAGGAAGGCTGAAGTTTCTATTCTACCTTTCTAAGGAGACCGAAGAGGATGGATCTTCTTCCTGAACTCGCTTCCTTTTCCGGTTGTTGGGA
CTCTGCCTGGCCGATACAAACGAGGCGATTTGCAGCTGACACTGGAGCAGCATCCGAGTCATCTCGGCCTCCGATTCCAGCCTCCTCTTTTCCTCCTCAAGGCGGATGAC
CTCCATCGCCTTGAAAATCTCCATTTCCGCCGTCAGCAGCGACTTTGTTAAGATTTGCAGGCTCTCTGCCAGGCCGGACAACCGTGTTTCCTCGCCGGAACTTCCCGAAT
CTTCACTTGTGGAAATATGGGAATCTTCATCCTCAGGATGTGGAGGAGCATCGGAATTCCCAATCGGATGCTCGCCGGTTGAGAATCCTGCTCCATCACTTCCATATTTT
TGACGTTTCTGGTTGTCGCTGCACTTGATCGGTTTGGTTCCACCTGTCTGCTCTTCCATTTTCAGCTTTTTCCAGAACCACCAGCTTTAGGCTAGAAAGGATTGTTTTGA
AAAGATTAAAGTGAGGTGCCAACAGCCAGTTGTACTTCGATAAGATTCCTATATTTTTCCACTAGTCCGAGTGATCAAACGGAGAGCCTACTATTTGGCACCTAATTTAT
AGTTATGAACAGTCTCTTTCCAACTTTTTTGAGAATTTCTTCATTTCCCCCAGTGATGCAACTTCAATTACAGACCTTCAGTGACTTGCCTTTCCAGTATGATCAGACAA
ACTAGATTTTTTTCTGATTCCAAAAGTTGCGTATATTGTTAATCATATTTGGGTTTCCTACATCAATACAGTATCGGGTAAATTCCAATGAAGTAACTGTGCCTAACATC
GTTTATGCTGCAAGGAATTCGGTAGCAAGTGGCTCACCGTTCATATTCGTTAAGAAAAGCCTGCCAATGACATTGGAATCTGTTTTTTTTTAGCAGTAAATGGGCCTGGA
GATGGTTTCGGTTGTGTTTCTAAATTTATCGGCCTAACAAGAAAGATTGAGATTGCATCGTGTCTGACCAACTTATTGAGTTATTTTACACACATTTGACTATGGAGTTA
GCTTGGACACTTGCAAGTGTCTATCAAAATTTAAGAATTGAATTTAACAATCCATCACTTCTTCAAAGGTGGGGATTATCTTGCAGGAACTAAAGAAACAAGAAACGCTG
GTGGGGATGAGGCTTGAGTAGAGAGTCCATTATTCAAATCCTCCTGTAGAGACACACACTACTCTAAATTTGTGGATGAAACATTACCATCATCCTCGGCTCAGCGTAGG
TTGACTGATGCGACACCCATGATACGACATTTTATTTAGCACCGCATGATCAGTGCCCATTACTGCCTTTTCATTAATGTGTCTGTCTGGCCCAGAGGGTGCATGAAAAA
TATGAA

Protein sequence

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MGTGKTSSARVIANQAGVPLVYVPLEVIMSKYYGESERLLGKVFSIANELSTGAIIFLDEIDGFEQDRKVVVIAATNRKQDLDPALISRFDLMITFGLPDERNREEIAAQ
YAKQLTKPELSEFARNTEGMSGRDIRDICQQAERSWASKANYPSFISSILEFLFGGHKYNLSFWIIRGKVSKTGEHGILPPLEEYIECAMSRRKALQTIDDHEIKDSNIR
TKKTQLA

Lsi01G004590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome