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Lsi01G004620 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G004620
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTranscription repressor
Genome locationchr01:3861306..3861791
RNA-Seq ExpressionLsi01G004620
SyntenyLsi01G004620
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR006458 - Ovate protein family, C-terminal
IPR038933 - Ovate protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647652.1 hypothetical protein Csa_002965 [Cucumis sativus]3.6e-6689.19Show/hide
Query:  MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDP
        MKAAGS+Q   QEQ +YRALCCGC+CNCRLSFSSSEETESF+S+ FPSVSSIAHAMVQERL+QMIREKRE+RNGKERKKQRSEDTKFVVMVAMEKCSDDP
Subjt:  MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDP

Query:  KEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHE
        KEDFR+SM EMILANRIEEPKDLRNLLNYYISMNSDECHGVI +VFHE
Subjt:  KEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHE

KAG6603803.1 putative transcription repressor OFP9, partial [Cucurbita argyrosperma subsp. sororia]2.2e-6885Show/hide
Query:  MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDP
        MKA  S+Q+ QQEQR  RALCCGC+CNCRLSFSSSEE ESF SE FPSVSSIAHAMVQERLDQMIRE RE+R  KER+KQRSEDTKFVVMVA EKCSDDP
Subjt:  MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDP

Query:  KEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRY
        +EDFR+SMMEMILANRIEEPKDLR+LLNYYISMNSDECHGVIL+VFHEVCS+LFL CKR+
Subjt:  KEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRY

XP_022132927.1 probable transcription repressor OFP9 [Momordica charantia]1.8e-6582.72Show/hide
Query:  MKAAGSSQQR-QQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRS-EDTKFVVMVAMEKCSD
        M+A+ SSQ++ QQ+QR YRALCCGC C CRLS SSSEE ESFSSE FPSVSSIAHAMVQERLDQMIRE+REIR+GKER+KQRS E+TKFVVMVAMEKCSD
Subjt:  MKAAGSSQQR-QQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRS-EDTKFVVMVAMEKCSD

Query:  DPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRY
        DP+EDFR+SMMEMILANRI++PKDLRNLLNYYISMNS+ECH VIL+VFHEVCS+LFL CKR+
Subjt:  DPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRY

XP_022977985.1 probable transcription repressor OFP9 [Cucurbita maxima]2.2e-6884.38Show/hide
Query:  MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDP
        MKA  S+Q+ QQEQR++RALCCGC+CNCRLSFSSSEE ES SSE FPSVS IAHAMVQERLDQMIRE RE+R  KER+KQRSEDTKFVVMVA EKCSDDP
Subjt:  MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDP

Query:  KEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRY
        +EDFR+SMMEMILANRIEEPKDLR+LLNYYISMNSDECHGVIL+VFHEVCS+LFL CKR+
Subjt:  KEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRY

XP_038883068.1 probable transcription repressor OFP9 [Benincasa hispida]5.0e-7691.93Show/hide
Query:  MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDP
        MKA GSS Q QQEQR+YRALCCGCTCNCRLSFSSSEETESFSSE FPSVSSIAHAMVQE+LDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDP
Subjt:  MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDP

Query:  KEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRYW
        KEDFR+SM EMILANRIE+PKDLRNLLNYYISMNSDECHGVIL+VFHEVCS LFL C+RYW
Subjt:  KEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRYW

TrEMBL top hitse value%identityAlignment
A0A0A0KHR6 Transcription repressor1.7e-6689.19Show/hide
Query:  MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDP
        MKAAGS+Q   QEQ +YRALCCGC+CNCRLSFSSSEETESF+S+ FPSVSSIAHAMVQERL+QMIREKRE+RNGKERKKQRSEDTKFVVMVAMEKCSDDP
Subjt:  MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDP

Query:  KEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHE
        KEDFR+SM EMILANRIEEPKDLRNLLNYYISMNSDECHGVI +VFHE
Subjt:  KEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHE

A0A5D3CN82 Transcription repressor1.4e-6388.89Show/hide
Query:  MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDP
        MKAAGS+Q   Q Q +YRALCCGC+CNCRLSFSSSEETESF+S+ FPSVSSIAHAMVQERLDQMIREKRE+RNGKERKKQRSEDTKFVVMVAMEKCSDDP
Subjt:  MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDP

Query:  KEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILK
        KEDFR+SM EMILANRIEEPKDLRNLLNYYISMNSDECHGVI +
Subjt:  KEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILK

A0A6J1BV71 Transcription repressor8.6e-6682.72Show/hide
Query:  MKAAGSSQQR-QQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRS-EDTKFVVMVAMEKCSD
        M+A+ SSQ++ QQ+QR YRALCCGC C CRLS SSSEE ESFSSE FPSVSSIAHAMVQERLDQMIRE+REIR+GKER+KQRS E+TKFVVMVAMEKCSD
Subjt:  MKAAGSSQQR-QQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRS-EDTKFVVMVAMEKCSD

Query:  DPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRY
        DP+EDFR+SMMEMILANRI++PKDLRNLLNYYISMNS+ECH VIL+VFHEVCS+LFL CKR+
Subjt:  DPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRY

A0A6J1INT5 Transcription repressor1.1e-6884.38Show/hide
Query:  MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDP
        MKA  S+Q+ QQEQR++RALCCGC+CNCRLSFSSSEE ES SSE FPSVS IAHAMVQERLDQMIRE RE+R  KER+KQRSEDTKFVVMVA EKCSDDP
Subjt:  MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDP

Query:  KEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRY
        +EDFR+SMMEMILANRIEEPKDLR+LLNYYISMNSDECHGVIL+VFHEVCS+LFL CKR+
Subjt:  KEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRY

A0A6J1KMM7 Transcription repressor8.6e-5073.08Show/hide
Query:  MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDP
        M AAGSSQ+ +Q+QR+YRALCC CTCNCRL FSSSEETESF SE FPS SS +HAM     D+MIRE           KQR E+TKFVVMVAMEKCSDDP
Subjt:  MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDP

Query:  KEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDEC-HGVILKVFHEVCSNLFL
        KEDFR+SMMEMIL N IE+PKDLR+LLN YISMNSDEC HGVI +VFHEVC NLFL
Subjt:  KEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDEC-HGVILKVFHEVCSNLFL

SwissProt top hitse value%identityAlignment
P0DKG3 Probable transcription repressor OFP93.2e-2554.24Show/hide
Query:  SVSSIAHAMVQERLDQMIREKRE------IRNGKERKKQRSED-----TKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSD
        S+SS+AH MVQE+L+QMIRE +E      IR  K R+++R  +     TKF+VM+AMEKCS DP++DFR SM+EMI+AN+I+E  +LR+LL YY+SMN  
Subjt:  SVSSIAHAMVQERLDQMIREKRE------IRNGKERKKQRSED-----TKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSD

Query:  ECHGVILKVFHEVCSNLF
        E    IL++F+EVC++LF
Subjt:  ECHGVILKVFHEVCSNLF

Q3E9B4 Transcription repressor OFP84.6e-0843.84Show/hide
Query:  SEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLF
        S D+      A+ K S DP EDFR SM+EMI+  +I  P +L+ LL  ++S+NS + H VI++VF E+ + LF
Subjt:  SEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLF

Q3EAL1 Transcription repressor OFP61.6e-0850.85Show/hide
Query:  VAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEV
        VA+EK SDDP  DFR SM++MIL N+I    +LR LL  ++S+NS   HG+I++ F E+
Subjt:  VAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEV

Q8VZN1 Transcription repressor OFP51.4e-0950Show/hide
Query:  AMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEV
        A+ KCS DP++DFR SM+EMI+ N I  P++L+ LL  Y+ +N+DE H +I+ VF +V
Subjt:  AMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEV

Q9LVL4 Transcription repressor OFP37.1e-0941.76Show/hide
Query:  QMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNL
        +++R+K+     KER  Q S+    V   A+   S DP++DFR SM+EMI+ N++ E KDL +LL  Y+S+NS E H VI+K F     +L
Subjt:  QMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNL

Arabidopsis top hitse value%identityAlignment
AT2G36026.1 Ovate family protein1.2e-1144.87Show/hide
Query:  SEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKR
        S  T     VA+EK SDDP  DFR SM++MIL N I    DLR LL+ ++S+N    HG+I++ F E+   +F   KR
Subjt:  SEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKR

AT3G52525.1 ovate family protein 61.1e-0950.85Show/hide
Query:  VAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEV
        VA+EK SDDP  DFR SM++MIL N+I    +LR LL  ++S+NS   HG+I++ F E+
Subjt:  VAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEV

AT4G18830.1 ovate family protein 51.0e-1050Show/hide
Query:  AMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEV
        A+ KCS DP++DFR SM+EMI+ N I  P++L+ LL  Y+ +N+DE H +I+ VF +V
Subjt:  AMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEV

AT5G19650.1 ovate family protein 83.3e-0943.84Show/hide
Query:  SEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLF
        S D+      A+ K S DP EDFR SM+EMI+  +I  P +L+ LL  ++S+NS + H VI++VF E+ + LF
Subjt:  SEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLF

AT5G58360.1 ovate family protein 35.0e-1041.76Show/hide
Query:  QMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNL
        +++R+K+     KER  Q S+    V   A+   S DP++DFR SM+EMI+ N++ E KDL +LL  Y+S+NS E H VI+K F     +L
Subjt:  QMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCAGCAGGCTCAAGCCAACAGCGTCAGCAAGAACAGAGATCATACAGAGCCTTGTGCTGTGGTTGCACTTGCAATTGCAGGTTGAGTTTTTCTTCTTCAGAAGA
AACAGAAAGCTTCAGCTCTGAGATATTCCCATCAGTTTCCAGCATCGCCCACGCCATGGTTCAGGAGAGGCTCGATCAAATGATAAGGGAAAAACGAGAGATAAGGAATG
GTAAAGAAAGAAAGAAACAGAGAAGTGAAGACACCAAATTTGTTGTAATGGTGGCTATGGAGAAATGCTCTGATGACCCTAAAGAAGACTTTAGAATTTCAATGATGGAA
ATGATTTTGGCTAATCGAATTGAGGAGCCAAAGGATCTACGTAACCTCTTGAATTATTATATCTCCATGAACTCAGATGAATGTCATGGTGTTATTTTAAAGGTATTCCA
TGAGGTTTGTAGCAATTTGTTTTTGGATTGTAAACGCTATTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCAGCAGGCTCAAGCCAACAGCGTCAGCAAGAACAGAGATCATACAGAGCCTTGTGCTGTGGTTGCACTTGCAATTGCAGGTTGAGTTTTTCTTCTTCAGAAGA
AACAGAAAGCTTCAGCTCTGAGATATTCCCATCAGTTTCCAGCATCGCCCACGCCATGGTTCAGGAGAGGCTCGATCAAATGATAAGGGAAAAACGAGAGATAAGGAATG
GTAAAGAAAGAAAGAAACAGAGAAGTGAAGACACCAAATTTGTTGTAATGGTGGCTATGGAGAAATGCTCTGATGACCCTAAAGAAGACTTTAGAATTTCAATGATGGAA
ATGATTTTGGCTAATCGAATTGAGGAGCCAAAGGATCTACGTAACCTCTTGAATTATTATATCTCCATGAACTCAGATGAATGTCATGGTGTTATTTTAAAGGTATTCCA
TGAGGTTTGTAGCAATTTGTTTTTGGATTGTAAACGCTATTGGTAG
Protein sequenceShow/hide protein sequence
MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMME
MILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRYW