; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G004870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G004870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:4028646..4030197
RNA-Seq ExpressionLsi01G004870
SyntenyLsi01G004870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647641.1 hypothetical protein Csa_002846 [Cucumis sativus]1.5e-7882.49Show/hide
Query:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPSFLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQESLNPDSI
        ME  A QREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQ+RRL+ RN KTTNPSF  TNS+KAV+ETSIAELDLQQNGL LVGFNHEQESLNPDSI
Subjt:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPSFLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQESLNPDSI

Query:  TSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSADE-LQHQTTIAG
        TSSSSE LD RAEILQGRVRLSHIRRLARSIGIHQMF    S  ESTSNCKSED  LEYD +RSS+ LR  RVK LARMMNSS+KPSADE  QH+TTIAG
Subjt:  TSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSADE-LQHQTTIAG

Query:  NKKVQMCPTMEETEDGG
          +VQ CP MEETEDGG
Subjt:  NKKVQMCPTMEETEDGG

TYK12993.1 uncharacterized protein E5676_scaffold255G005900 [Cucumis melo var. makuwa]1.4e-7183.08Show/hide
Query:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPSFLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQESLNPDSI
        ME SA +REKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRL+ RNVKTTNPSF  TNS+KA++ TSIAELDLQQNG+ LVGFNHEQESLNPDSI
Subjt:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPSFLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQESLNPDSI

Query:  TSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSADE-LQHQTTIAG
        TSSSSETLD RAEILQGRVRLSHIRRLARSIGIHQMF  +G   ESTSNCKS+D +LEYD SR SK LR   VK LARMMNSSVKPSA+E  QHQTTIAG
Subjt:  TSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSADE-LQHQTTIAG

Query:  N
        +
Subjt:  N

XP_008440080.1 PREDICTED: uncharacterized protein LOC103484665 [Cucumis melo]3.0e-7182.59Show/hide
Query:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPSFLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQESLNPDSI
        ME SA +REKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRL+ +NVKTTNPSF  TNS+KA++ETSIAELDLQQNG+ LVGFNHEQESLNPDSI
Subjt:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPSFLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQESLNPDSI

Query:  TSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSADE-LQHQTTIAG
        TSSSSETLD RAEILQGRVRLSHIRRLARSIGIHQMF  +G   ESTSNCKS+D +LEYD SR SK LR   VK LARMMNSSVKPSA+E  QHQT IAG
Subjt:  TSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSADE-LQHQTTIAG

Query:  N
        +
Subjt:  N

XP_038881721.1 uncharacterized protein LOC120073145 isoform X1 [Benincasa hispida]3.8e-7482Show/hide
Query:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPSFLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQESLNPDSI
        MEE+A QRE+ERERRRIRD+ERRSSMS EQRERHLARRRRNYQLRRLRSRNVK TN  F ET  YKAVAETSIAELDLQ+NGL LVGFNHEQESLNPDS 
Subjt:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPSFLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQESLNPDSI

Query:  TSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSADELQHQTTIAGN
         SSS ETL  +AE  QGRVRLSHIRRLARSIGIHQM+  M  +EESTSNCK ED +LEYD SRSSKVLRLN +KHLARMMNSSVKPS DE QHQTTIAG+
Subjt:  TSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSADELQHQTTIAGN

XP_038881723.1 uncharacterized protein LOC120073145 isoform X2 [Benincasa hispida]5.0e-7482.41Show/hide
Query:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPSFLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQESLNPDSI
        MEE+A QRE+ERERRRIRD+ERRSSMS EQRERHLARRRRNYQLRRLRSRNVK TN  F ET  YKAVAETSIAELDLQ+NGL LVGFNHEQESLNPDS 
Subjt:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPSFLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQESLNPDSI

Query:  TSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSADELQHQTTIAG
         SSS ETL  +AE  QGRVRLSHIRRLARSIGIHQM+  M  +EESTSNCK ED +LEYD SRSSKVLRLN +KHLARMMNSSVKPS DE QHQTTIAG
Subjt:  TSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSADELQHQTTIAG

TrEMBL top hitse value%identityAlignment
A0A0A0KHQ0 Uncharacterized protein5.6e-7183.5Show/hide
Query:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPSFLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQESLNPDSI
        ME  A QREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQ+RRL+ RN KTTNPSF  TNS+KAV+ETSIAELDLQQNGL LVGFNHEQESLNPDSI
Subjt:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPSFLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQESLNPDSI

Query:  TSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSADE-LQHQTTIAG
        TSSSSE LD RAEILQGRVRLSHIRRLARSIGIHQMF    S  ESTSNCKSED  LEYD +RSS+ LR  RVK LARMMNSS+KPSADE  QH+TTIAG
Subjt:  TSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSADE-LQHQTTIAG

A0A1S3B0B1 uncharacterized protein LOC1034846651.5e-7182.59Show/hide
Query:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPSFLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQESLNPDSI
        ME SA +REKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRL+ +NVKTTNPSF  TNS+KA++ETSIAELDLQQNG+ LVGFNHEQESLNPDSI
Subjt:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPSFLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQESLNPDSI

Query:  TSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSADE-LQHQTTIAG
        TSSSSETLD RAEILQGRVRLSHIRRLARSIGIHQMF  +G   ESTSNCKS+D +LEYD SR SK LR   VK LARMMNSSVKPSA+E  QHQT IAG
Subjt:  TSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSADE-LQHQTTIAG

Query:  N
        +
Subjt:  N

A0A5D3CM44 Uncharacterized protein6.6e-7283.08Show/hide
Query:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPSFLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQESLNPDSI
        ME SA +REKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRL+ RNVKTTNPSF  TNS+KA++ TSIAELDLQQNG+ LVGFNHEQESLNPDSI
Subjt:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPSFLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQESLNPDSI

Query:  TSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSADE-LQHQTTIAG
        TSSSSETLD RAEILQGRVRLSHIRRLARSIGIHQMF  +G   ESTSNCKS+D +LEYD SR SK LR   VK LARMMNSSVKPSA+E  QHQTTIAG
Subjt:  TSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSADE-LQHQTTIAG

Query:  N
        +
Subjt:  N

A0A6J1GDC8 uncharacterized protein LOC1114531472.3e-6172.12Show/hide
Query:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPS------FLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQES
        MEES SQR++ERERRRIRDRERRSSM++EQRERHLA RRRNY LRRLRSR+V+ +NPS        ETNS++ VAETSIAELDLQ+NG+ L+ FNHEQ+ 
Subjt:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPS------FLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQES

Query:  LNPDSITSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSA--DELQ
             +TSS SETLD +AEILQGRVRLSHIRRLARSIGIHQM   M SMEES  NCKSEDH LE D  RSSK LRLNRVKHLAR MNSS KPSA  DE  
Subjt:  LNPDSITSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSA--DELQ

Query:  HQTTIAGN
        +QT IAG+
Subjt:  HQTTIAGN

A0A6J1IRH4 uncharacterized protein LOC1114787025.9e-6575.85Show/hide
Query:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPS------FLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQES
        MEESASQR+KERERRRIRDRERRSSM++EQRERHLA RRRNY LRRLRSR+V+TTNPS        ETNS + VAETSIAELDLQ+NGL L+ FNHEQ+ 
Subjt:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPS------FLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQES

Query:  LNPDSITSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPS-ADELQH
             +TSS SETLD +AEILQGRVRLSHIRRLARSIGIHQM   M SMEEST NCKSEDH LE D  RSSK LRLNRVKHLAR +NSSVKPS ADE Q+
Subjt:  LNPDSITSSSSETLDSRAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPS-ADELQH

Query:  QTTIAGN
        QT IAG+
Subjt:  QTTIAGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G16460.1 unknown protein4.1e-1037.34Show/hide
Query:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNP--------------------SFLETNSYKAVAETSIAELDLQQ
        +E  +S++E+ERERRR+RDRERR SMS ++RERHLARRR+NYQLRR R+   +  +P                    SF+E++    +    + EL    
Subjt:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNP--------------------SFLETNSYKAVAETSIAELDLQQ

Query:  NGLRLVGFNHEQESLNPDSITSSSSETLDSRAEILQGR------VRLSHIRRLARSIG
          +RL    H   +LN  S TS+ +E+ ++ A   + R      +RLS I+RL R  G
Subjt:  NGLRLVGFNHEQESLNPDSITSSSSETLDSRAEILQGR------VRLSHIRRLARSIG

AT4G16460.2 unknown protein4.1e-1037.34Show/hide
Query:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNP--------------------SFLETNSYKAVAETSIAELDLQQ
        +E  +S++E+ERERRR+RDRERR SMS ++RERHLARRR+NYQLRR R+   +  +P                    SF+E++    +    + EL    
Subjt:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNP--------------------SFLETNSYKAVAETSIAELDLQQ

Query:  NGLRLVGFNHEQESLNPDSITSSSSETLDSRAEILQGR------VRLSHIRRLARSIG
          +RL    H   +LN  S TS+ +E+ ++ A   + R      +RLS I+RL R  G
Subjt:  NGLRLVGFNHEQESLNPDSITSSSSETLDSRAEILQGR------VRLSHIRRLARSIG

AT4G16460.3 unknown protein4.1e-1037.34Show/hide
Query:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNP--------------------SFLETNSYKAVAETSIAELDLQQ
        +E  +S++E+ERERRR+RDRERR SMS ++RERHLARRR+NYQLRR R+   +  +P                    SF+E++    +    + EL    
Subjt:  MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNP--------------------SFLETNSYKAVAETSIAELDLQQ

Query:  NGLRLVGFNHEQESLNPDSITSSSSETLDSRAEILQGR------VRLSHIRRLARSIG
          +RL    H   +LN  S TS+ +E+ ++ A   + R      +RLS I+RL R  G
Subjt:  NGLRLVGFNHEQESLNPDSITSSSSETLDSRAEILQGR------VRLSHIRRLARSIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAATCGGCATCACAGAGGGAGAAAGAGCGAGAACGACGCCGTATAAGGGACAGAGAAAGAAGATCGTCAATGAGCATAGAACAGAGAGAAAGGCATCTCGCAAG
ACGCCGACGAAACTACCAACTACGAAGATTAAGATCTCGAAATGTAAAAACAACGAATCCAAGCTTTCTTGAAACAAATTCATACAAGGCAGTTGCAGAGACATCAATTG
CAGAGCTTGATCTGCAACAAAATGGGCTTAGGCTCGTTGGTTTCAACCACGAACAAGAATCCTTAAATCCAGATTCCATAACATCTTCCAGTTCTGAAACTTTGGACTCG
AGAGCTGAAATTCTCCAAGGGAGGGTTCGGTTGAGTCATATTCGACGACTTGCACGTTCAATTGGGATTCACCAAATGTTTCCACACATGGGTTCCATGGAAGAATCAAC
TTCCAATTGTAAGTCTGAGGATCATCACTTGGAATATGATACAAGTAGATCATCGAAAGTGTTACGGCTAAATCGCGTCAAGCATCTTGCGAGAATGATGAATTCTTCTG
TGAAACCATCTGCTGATGAATTACAACATCAAACTACCATTGCAGGCAACAAAAAGGTACAAATGTGCCCAACAATGGAAGAAACAGAGGATGGTGGATTGATTGATTGG
CTTGGCCTTCACATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAATCGGCATCACAGAGGGAGAAAGAGCGAGAACGACGCCGTATAAGGGACAGAGAAAGAAGATCGTCAATGAGCATAGAACAGAGAGAAAGGCATCTCGCAAG
ACGCCGACGAAACTACCAACTACGAAGATTAAGATCTCGAAATGTAAAAACAACGAATCCAAGCTTTCTTGAAACAAATTCATACAAGGCAGTTGCAGAGACATCAATTG
CAGAGCTTGATCTGCAACAAAATGGGCTTAGGCTCGTTGGTTTCAACCACGAACAAGAATCCTTAAATCCAGATTCCATAACATCTTCCAGTTCTGAAACTTTGGACTCG
AGAGCTGAAATTCTCCAAGGGAGGGTTCGGTTGAGTCATATTCGACGACTTGCACGTTCAATTGGGATTCACCAAATGTTTCCACACATGGGTTCCATGGAAGAATCAAC
TTCCAATTGTAAGTCTGAGGATCATCACTTGGAATATGATACAAGTAGATCATCGAAAGTGTTACGGCTAAATCGCGTCAAGCATCTTGCGAGAATGATGAATTCTTCTG
TGAAACCATCTGCTGATGAATTACAACATCAAACTACCATTGCAGGCAACAAAAAGGTACAAATGTGCCCAACAATGGAAGAAACAGAGGATGGTGGATTGATTGATTGG
CTTGGCCTTCACATGTGACAGAAATCCAGAGTCTTCCAGCGAAAGATCAGAGGAAGAAGATGATGGTGTAACTTGTAAGATCATATATGTTGTACTAGTGGTTAAACAAT
CTTACTTACATGGAGAATTGAAGACATTATGAGTGGCAATTTTGAAGTAACAGCGATAAGGTTGATATGCTTCATTGAGCAGTTATATGTTGTTCTTGAAAGGATTAATA
TTCAAAATTCTGGGGTTTTCTTTCTCAGAACTTATGGAACGAACATTTATAGTTGGGGTTAGATTATAGGCATCTCTGCCCTATTTATACTTCGAGTGTATTTTTTTTTT
TTAAAAAAAGAAAATTCATATGAAATAAAATCACTTATTCAATAAGTTGTTTTGAAAGAATTATTAATTTAGAGTGTGTTAGTGGATTGATAGGTTGACATAAACACGTT
TTTTTTTAAGGAAAAAAAAGTGAAGTAACTGATTGAAAAC
Protein sequenceShow/hide protein sequence
MEESASQREKERERRRIRDRERRSSMSIEQRERHLARRRRNYQLRRLRSRNVKTTNPSFLETNSYKAVAETSIAELDLQQNGLRLVGFNHEQESLNPDSITSSSSETLDS
RAEILQGRVRLSHIRRLARSIGIHQMFPHMGSMEESTSNCKSEDHHLEYDTSRSSKVLRLNRVKHLARMMNSSVKPSADELQHQTTIAGNKKVQMCPTMEETEDGGLIDW
LGLHM