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Lsi01G004930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G004930
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:4059883..4060176
RNA-Seq ExpressionLsi01G004930
SyntenyLsi01G004930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594704.1 hypothetical protein SDJN03_11257, partial [Cucurbita argyrosperma subsp. sororia]8.8e-3679.17Show/hide
Query:  MALRWLLHSTSYLLGNPNEVHGYGEERSPKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ
        M L+WLLHSTS LLGNP EV       S +GKRGCEEIC SGFQMPLHYPRY KADY+KME+WK+DLLLKEYGLSF GSLEEKRAFAMGAF WPDQ
Subjt:  MALRWLLHSTSYLLGNPNEVHGYGEERSPKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ

KAG6603827.1 hypothetical protein SDJN03_04436, partial [Cucurbita argyrosperma subsp. sororia]4.5e-4084.69Show/hide
Query:  MALRWLLHSTSYLLGNPN-EVHGYGEERSPKGKRGCEEICT-SGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ
        MAL WLL+S + LLGNPN EVHGYGEERS KG++GCEEICT SGFQMPLHYP Y KADY+KMEEWK+D LLKEYGLSFQGSLEEKRAFAMGAFLWPDQ
Subjt:  MALRWLLHSTSYLLGNPN-EVHGYGEERSPKGKRGCEEICT-SGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ

TYK12988.1 uncharacterized protein E5676_scaffold255G005850 [Cucumis melo var. makuwa]9.7e-4386.46Show/hide
Query:  MALRWLLHSTSYLLGNPNEVHGYGEERSPKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ
        M LRWLLHSTSYLLGNPNE H YGEERS  GK+G EEIC SGFQMPLHYPRYKK+DY+ ME WKLDLLLKEYGLSFQGSLEEKRAFAMGAF+WPDQ
Subjt:  MALRWLLHSTSYLLGNPNEVHGYGEERSPKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ

XP_011658113.1 uncharacterized protein LOC105435946 [Cucumis sativus]2.2e-4286.46Show/hide
Query:  MALRWLLHSTSYLLGNPNEVHGYGEERSPKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ
        M LR LLHS SYLLGNPNE H YGEERS KGK+G EE+C SGFQMPLHYPRYKK+DY+KMEEWKLDLLLKEYGLSF+GSLEEKRAFAMGAFLWPDQ
Subjt:  MALRWLLHSTSYLLGNPNEVHGYGEERSPKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ

XP_038882557.1 uncharacterized protein LOC120073788 [Benincasa hispida]2.0e-4087.5Show/hide
Query:  MALRWLLHSTSYLLGNPNEVHGYGEERSPKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ
        MALRWLLHSTSYLLGNP E    GEE S KGK G EEICTSGFQMPLHYPRY KADY+KMEEWKLDLLLKEYGLSFQGSLEEKRAFA+GAFLWPDQ
Subjt:  MALRWLLHSTSYLLGNPNEVHGYGEERSPKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ

TrEMBL top hitse value%identityAlignment
A0A0A0KMW8 Uncharacterized protein1.0e-4286.46Show/hide
Query:  MALRWLLHSTSYLLGNPNEVHGYGEERSPKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ
        M LR LLHS SYLLGNPNE H YGEERS KGK+G EE+C SGFQMPLHYPRYKK+DY+KMEEWKLDLLLKEYGLSF+GSLEEKRAFAMGAFLWPDQ
Subjt:  MALRWLLHSTSYLLGNPNEVHGYGEERSPKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ

A0A2N9EZP3 Uncharacterized protein2.1e-2761.62Show/hide
Query:  MALRWLLHSTSYLLGNPNEVHGYGEERS---PKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ
        MAL WL+HS  ++LG P + +     +S   P G    +E+  SGFQMPLHYPRY KADYEKMEEWK+DLLLK+YGL+F+G+L+EKRA+AMGAFLWP Q
Subjt:  MALRWLLHSTSYLLGNPNEVHGYGEERS---PKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ

A0A5D3CP92 Uncharacterized protein4.7e-4386.46Show/hide
Query:  MALRWLLHSTSYLLGNPNEVHGYGEERSPKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ
        M LRWLLHSTSYLLGNPNE H YGEERS  GK+G EEIC SGFQMPLHYPRYKK+DY+ ME WKLDLLLKEYGLSFQGSLEEKRAFAMGAF+WPDQ
Subjt:  MALRWLLHSTSYLLGNPNEVHGYGEERSPKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ

A0A6J1BUU9 uncharacterized protein LOC1110055693.1e-3470.75Show/hide
Query:  MALRWLLHSTSYLLGNPNEVHGYG--------EERSPKGKRGCEEIC--TSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGA
        MAL+WLLHS  YLL   NEVH           EER PKGK+GCEEIC   SGFQMPLHYPRY KADY+KMEEW++DLLL +YG+ F+GSLEEKRAFAMGA
Subjt:  MALRWLLHSTSYLLGNPNEVHGYG--------EERSPKGKRGCEEIC--TSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGA

Query:  FLWPDQ
        FLWPDQ
Subjt:  FLWPDQ

A0A7J0EYW1 Uncharacterized protein1.0e-2962.62Show/hide
Query:  MALRWLLHST-SYLLGNPNEVHGYGEERS---------PKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGA
        MALRWLLHS  + +LG PNE     + +S         PK    C ++C SGFQMPLHYPRYKKADYEKMEEWK+D++L+EYGL F GSL+EKRAFAMG 
Subjt:  MALRWLLHST-SYLLGNPNEVHGYGEERS---------PKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGA

Query:  FLWPDQI
        FLWPDQ+
Subjt:  FLWPDQI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09950.1 unknown protein1.2e-1761.54Show/hide
Query:  KRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGL--SFQGSLEEKRAFAMGAFLWP
        K G  +  +SGF+MPLHYPRY K DYE+MEEW+LDLLL EYGL      +L EKRAFA+  F+WP
Subjt:  KRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGL--SFQGSLEEKRAFAMGAFLWP

AT3G11405.1 unknown protein1.2e-0957.41Show/hide
Query:  SGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQ-GSLEEKRAFAMGAFLW
        S FQMPL YP Y K  Y+ M E +LD LLK YGL    G+L  K+ FA+GAFLW
Subjt:  SGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQ-GSLEEKRAFAMGAFLW

AT3G55570.1 unknown protein3.1e-1566.04Show/hide
Query:  SGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLW
        S F+MPLHYPRY K DY+ M EWKLD +L +YGLS  G L  KR FA+GAFLW
Subjt:  SGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLW

AT5G41761.1 unknown protein1.7e-1663.16Show/hide
Query:  TSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ
        +S FQ+PLHYP+Y K+DYEKM EW+LD LL+EYGL   G   EKR FA+GAFLW  +
Subjt:  TSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQ

AT5G55620.1 unknown protein7.2e-2068.42Show/hide
Query:  SGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQI
        SGFQ+PLHYP+Y K+DYE M++ +LDLLLK+YG SF+GSLE+KR FA+ +FLWPDQ+
Subjt:  SGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTAAGATGGCTGCTTCATTCAACAAGTTATCTTCTTGGGAACCCAAATGAGGTCCATGGCTATGGTGAAGAGAGAAGTCCAAAAGGGAAAAGGGGTTGTGAAGA
AATATGCACTTCTGGGTTTCAAATGCCTCTTCATTACCCTCGCTACAAGAAAGCAGATTACGAGAAGATGGAGGAGTGGAAGCTTGATCTCCTGCTCAAGGAATATGGCT
TGAGTTTTCAAGGCAGTTTGGAGGAGAAGAGGGCCTTTGCTATGGGTGCATTTCTATGGCCTGATCAGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTAAGATGGCTGCTTCATTCAACAAGTTATCTTCTTGGGAACCCAAATGAGGTCCATGGCTATGGTGAAGAGAGAAGTCCAAAAGGGAAAAGGGGTTGTGAAGA
AATATGCACTTCTGGGTTTCAAATGCCTCTTCATTACCCTCGCTACAAGAAAGCAGATTACGAGAAGATGGAGGAGTGGAAGCTTGATCTCCTGCTCAAGGAATATGGCT
TGAGTTTTCAAGGCAGTTTGGAGGAGAAGAGGGCCTTTGCTATGGGTGCATTTCTATGGCCTGATCAGATTTGA
Protein sequenceShow/hide protein sequence
MALRWLLHSTSYLLGNPNEVHGYGEERSPKGKRGCEEICTSGFQMPLHYPRYKKADYEKMEEWKLDLLLKEYGLSFQGSLEEKRAFAMGAFLWPDQI