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Lsi01G005390 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G005390
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:4382799..4384895
RNA-Seq ExpressionLsi01G005390
SyntenyLsi01G005390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5951584.1 hypothetical protein HYC85_009528 [Camellia sinensis]8.7e-1338.98Show/hide
Query:  IVNMKHLKAFDDTRNDLVLQTRVLTLCILPNHNNIDILMPGRKPRKIKTIHKRRIKIKLFPQLHIQRTHTTANRSHQSSLQTHFIFLNRVNYFLGHLLHI
        ++  ++L+AF+    DL+L+ RVL L +LP  NNI+IL+  R+ R+I+ I K  I I+LFP+L+++RTHTT + S +   Q   +  +R+++   H LH+
Subjt:  IVNMKHLKAFDDTRNDLVLQTRVLTLCILPNHNNIDILMPGRKPRKIKTIHKRRIKIKLFPQLHIQRTHTTANRSHQSSLQTHFIFLNRVNYFLGHLLHI

Query:  AMNLKLLEIQRGVHRIHD
        AM++  L+   GV+  HD
Subjt:  AMNLKLLEIQRGVHRIHD

OAY66319.1 hypothetical protein ACMD2_19469 [Ananas comosus]1.3e-1132.67Show/hide
Query:  KAFDDTRNDLVLQTRVLTLCILPNHNNIDILMPGRKPRKIKTIHKRRIKIKLFPQLHIQRTHTTANRSHQSSLQTHFIFLNRVNYFLGHLLHIAMNLKLL
        +A  D R+DLVL+TRVL L +LP+H+++D+L+   +  +++ + +R ++I+L  +L ++     A+  ++++L+   +  +R++       H+A++L  L
Subjt:  KAFDDTRNDLVLQTRVLTLCILPNHNNIDILMPGRKPRKIKTIHKRRIKIKLFPQLHIQRTHTTANRSHQSSLQTHFIFLNRVNYFLGHLLHIAMNLKLL

Query:  EIQRGVHRIHDLLHGASNQGANSVSGNQGNGSGGAVSGSGHVSDGSILSV
        E+   VHR+H L  GA +QGA++V+ +Q +    AV+G  HV  GS   V
Subjt:  EIQRGVHRIHDLLHGASNQGANSVSGNQGNGSGGAVSGSGHVSDGSILSV

THU46608.1 hypothetical protein C4D60_Mb09t06710 [Musa balbisiana]1.7e-0839.53Show/hide
Query:  HLKAFDDTRNDLVLQTRVLTLCILPNHNNIDILMPGRKPRKIKTIHKRRIKIKLFPQLHIQRTHTTANRSHQSSLQTHFIFLNRVN
        +L+   D RNDLVLQT VL L ILP+H+NI +LMPGR+  +++ + +RR++I+   QLH++    +A+R  +++L+   +  +R++
Subjt:  HLKAFDDTRNDLVLQTRVLTLCILPNHNNIDILMPGRKPRKIKTIHKRRIKIKLFPQLHIQRTHTTANRSHQSSLQTHFIFLNRVN

TrEMBL top hitse value%identityAlignment
A0A199UNI7 Uncharacterized protein6.1e-1232.67Show/hide
Query:  KAFDDTRNDLVLQTRVLTLCILPNHNNIDILMPGRKPRKIKTIHKRRIKIKLFPQLHIQRTHTTANRSHQSSLQTHFIFLNRVNYFLGHLLHIAMNLKLL
        +A  D R+DLVL+TRVL L +LP+H+++D+L+   +  +++ + +R ++I+L  +L ++     A+  ++++L+   +  +R++       H+A++L  L
Subjt:  KAFDDTRNDLVLQTRVLTLCILPNHNNIDILMPGRKPRKIKTIHKRRIKIKLFPQLHIQRTHTTANRSHQSSLQTHFIFLNRVNYFLGHLLHIAMNLKLL

Query:  EIQRGVHRIHDLLHGASNQGANSVSGNQGNGSGGAVSGSGHVSDGSILSV
        E+   VHR+H L  GA +QGA++V+ +Q +    AV+G  HV  GS   V
Subjt:  EIQRGVHRIHDLLHGASNQGANSVSGNQGNGSGGAVSGSGHVSDGSILSV

A0A2M3ZHK9 Uncharacterized protein (Fragment)2.5e-0533.09Show/hide
Query:  LKAFDDTRNDLVLQTRVLTLCILPNHNNIDILMPGRKPRKIKTIHKRRIKIKLFPQLHIQRTHTTANRSHQSSLQTHFIFLNRVNYFLGHL-LHIAM---
        L A   T +DLVL  RVLTL +L + ++ID+++      +       R++++L  +  I+R  T ANR HQ SLQTH + ++R++  L    L I +   
Subjt:  LKAFDDTRNDLVLQTRVLTLCILPNHNNIDILMPGRKPRKIKTIHKRRIKIKLFPQLHIQRTHTTANRSHQSSLQTHFIFLNRVNYFLGHL-LHIAM---

Query:  -NLKLLEIQRGVHRIHDLLHGASNQGANSVSGNQGN
         ++    + R V    DLLHG+ N   NS++ ++ N
Subjt:  -NLKLLEIQRGVHRIHDLLHGASNQGANSVSGNQGN

A0A4S8IEH1 Uncharacterized protein8.2e-0939.53Show/hide
Query:  HLKAFDDTRNDLVLQTRVLTLCILPNHNNIDILMPGRKPRKIKTIHKRRIKIKLFPQLHIQRTHTTANRSHQSSLQTHFIFLNRVN
        +L+   D RNDLVLQT VL L ILP+H+NI +LMPGR+  +++ + +RR++I+   QLH++    +A+R  +++L+   +  +R++
Subjt:  HLKAFDDTRNDLVLQTRVLTLCILPNHNNIDILMPGRKPRKIKTIHKRRIKIKLFPQLHIQRTHTTANRSHQSSLQTHFIFLNRVN

A0A7C8YSI6 Uncharacterized protein1.3e-2251.28Show/hide
Query:  VLQTRVLTLCILPNHNNIDILMPGRKPRKIKTIHKRRIKIKLFPQLHIQRTHTTANRSHQSSLQTHFIFLNRVNYFLGHLLHIAMNLKLLEIQRGVHRIH
        +L+ RVL+L ILP H+NI +LMP  +P ++K I KR IKIKL PQLHIQR + T+NRS ++SL+ H +    + +F  +LLH+ +NL LLE+ R VHR+H
Subjt:  VLQTRVLTLCILPNHNNIDILMPGRKPRKIKTIHKRRIKIKLFPQLHIQRTHTTANRSHQSSLQTHFIFLNRVNYFLGHLLHIAMNLKLLEIQRGVHRIH

Query:  DLLHGASNQGANSVSGN
         LL GAS+Q  +S++ N
Subjt:  DLLHGASNQGANSVSGN

A0A7J7HHX6 Uncharacterized protein4.2e-1338.98Show/hide
Query:  IVNMKHLKAFDDTRNDLVLQTRVLTLCILPNHNNIDILMPGRKPRKIKTIHKRRIKIKLFPQLHIQRTHTTANRSHQSSLQTHFIFLNRVNYFLGHLLHI
        ++  ++L+AF+    DL+L+ RVL L +LP  NNI+IL+  R+ R+I+ I K  I I+LFP+L+++RTHTT + S +   Q   +  +R+++   H LH+
Subjt:  IVNMKHLKAFDDTRNDLVLQTRVLTLCILPNHNNIDILMPGRKPRKIKTIHKRRIKIKLFPQLHIQRTHTTANRSHQSSLQTHFIFLNRVNYFLGHLLHI

Query:  AMNLKLLEIQRGVHRIHD
        AM++  L+   GV+  HD
Subjt:  AMNLKLLEIQRGVHRIHD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGGCATCATTCTTGAAAAAACAGGGGAAAAACTACAGAAGCTTCAAATTGTGAACATGAAGCACCTTAAGGCTTTCGACGACACCAGGAACGACCTCGTGCTCCA
AACCAGAGTACTCACCCTCTGTATTCTCCCTAATCACAACAATATCGACATTCTCATGCCTGGTAGGAAGCCCAGGAAGATTAAAACAATTCACAAGCGACGCATAAAGA
TCAAGCTCTTTCCTCAGTTGCACATTCAACGAACTCACACCACCGCCAACAGGAGTCACCAATCCTCCCTTCAAACACACTTTATTTTTCTTAATCGAGTCAATTACTTC
TTGGGGCACCTTCTTCATATCGCCATGAATCTCAAACTTCTCGAAATACAAAGGGGCGTGCATCGCATCCATGACTTGCTCCACGGCGCCAGTAACCAAGGGGCCAATTC
CGTCTCCGGGAATCAAGGTAACGGCTCGGGGGGCGCCGTCTCCGGGTCGGGGCATGTAAGTGACGGATCGATTTTGAGCGTCGACTGTGGATTTGAAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGGCATCATTCTTGAAAAAACAGGGGAAAAACTACAGAAGCTTCAAATTGTGAACATGAAGCACCTTAAGGCTTTCGACGACACCAGGAACGACCTCGTGCTCCA
AACCAGAGTACTCACCCTCTGTATTCTCCCTAATCACAACAATATCGACATTCTCATGCCTGGTAGGAAGCCCAGGAAGATTAAAACAATTCACAAGCGACGCATAAAGA
TCAAGCTCTTTCCTCAGTTGCACATTCAACGAACTCACACCACCGCCAACAGGAGTCACCAATCCTCCCTTCAAACACACTTTATTTTTCTTAATCGAGTCAATTACTTC
TTGGGGCACCTTCTTCATATCGCCATGAATCTCAAACTTCTCGAAATACAAAGGGGCGTGCATCGCATCCATGACTTGCTCCACGGCGCCAGTAACCAAGGGGCCAATTC
CGTCTCCGGGAATCAAGGTAACGGCTCGGGGGGCGCCGTCTCCGGGTCGGGGCATGTAAGTGACGGATCGATTTTGAGCGTCGACTGTGGATTTGAAACATGA
Protein sequenceShow/hide protein sequence
MTGIILEKTGEKLQKLQIVNMKHLKAFDDTRNDLVLQTRVLTLCILPNHNNIDILMPGRKPRKIKTIHKRRIKIKLFPQLHIQRTHTTANRSHQSSLQTHFIFLNRVNYF
LGHLLHIAMNLKLLEIQRGVHRIHDLLHGASNQGANSVSGNQGNGSGGAVSGSGHVSDGSILSVDCGFET