; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G005600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G005600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:4484852..4486109
RNA-Seq ExpressionLsi01G005600
SyntenyLsi01G005600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACN36169.1 unknown [Zea mays]4.1e-1326.65Show/hide
Query:  KAGLGKETCEQSPHGTSHSVCVEDAQSIVDTLKECQPSMQHHHGVPWNQTSKDAHHHGCDRWMKELTCTRSDTDKASDDPLNCTNHRAFLIK--------
        + G+G+E  EQ+     H+V V+DAQ +V  L++  P +Q HH VP +  S+ AHHHG  R      C   D D++ D  L+  +    L +        
Subjt:  KAGLGKETCEQSPHGTSHSVCVEDAQSIVDTLKECQPSMQHHHGVPWNQTSKDAHHHGCDRWMKELTCTRSDTDKASDDPLNCTNHRAFLIK--------

Query:  ------RLVAVQTCVFKMASDVIRPAANGAPPLNPVQPS---------QRNPAP--------PTMCILP-VTGVSWPDLQVWPPDQKPLSLQLDTKAYGE
                V V+    +     +RPAA  A P +P Q           +R P P        P  C  P        D+     D  PL  +     YGE
Subjt:  ------RLVAVQTCVFKMASDVIRPAANGAPPLNPVQPS---------QRNPAP--------PTMCILP-VTGVSWPDLQVWPPDQKPLSLQLDTKAYGE

Query:  RRSQQVTYPVCSCETSHPR-------RKMNDVAAGVVNERVSHIGTKSIHAPKFILPSKDPASNTTV-MAAKANWKN----TQRYAGLTNKPEQSVAKCH
          +  V          HPR       ++  D   G   E    +  +     +        A+   V    +A   +     QR   L  + +Q VA+ H
Subjt:  RRSQQVTYPVCSCETSHPR-------RKMNDVAAGVVNERVSHIGTKSIHAPKFILPSKDPASNTTV-MAAKANWKN----TQRYAGLTNKPEQSVAKCH

Query:  TMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPVG
         + P HP   H  + ++ HEGRV  P  LHHAA++++Q    L+      R+LP +V LV P+G
Subjt:  TMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPVG

KAB8084139.1 hypothetical protein EE612_006629, partial [Oryza sativa]1.2e-0928.52Show/hide
Query:  RAFLIKRLVAVQTCVFKMASDVIRPAANGAPPLNPVQPSQRNPAPPTM--------------CILPV--------TGVSWPDLQVWPPDQKPLSLQLDT-
        R   ++RL A  T V   A D +   A GAPPLNP QPS  +P P  M               + P          G    D+     D  PL  +    
Subjt:  RAFLIKRLVAVQTCVFKMASDVIRPAANGAPPLNPVQPSQRNPAPPTM--------------CILPV--------TGVSWPDLQVWPPDQKPLSLQLDT-

Query:  KAYG---------ERRSQQVTYPVCSCETSHPRRKMNDVAAGVVNE-----RVSHIGTKSIHAPKFILPSKDPASNTTVMAAKANWKNTQRYAGLTNKPE
        +A G         ER  +     V   E     +   D     + +     RV  +G + +     +LP      +     A+      QR AGL  + E
Subjt:  KAYG---------ERRSQQVTYPVCSCETSHPRRKMNDVAAGVVNE-----RVSHIGTKSIHAPKFILPSKDPASNTTVMAAKANWKNTQRYAGLTNKPE

Query:  QSVAKCHTMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPV
        Q VA+ H    QHP  +     ++ HEGRVD P  LH AA++++QP + LE D    RELP +V  V P+
Subjt:  QSVAKCHTMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPV

KAG7034059.1 hypothetical protein SDJN02_03785, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-4951.98Show/hide
Query:  MASDVIRPAANGAPPLNPVQPSQRNPAPPTMCILPVTGVSWPDLQVWPP---------DQKPLSLQLDTKAYGERRSQQVTYPVCSCETSHPRRKMNDVA
        MASDVIRPAANGAPPLNPVQPSQRNPAP TM  +   G      +   P         +    +L        +   +++ YPV   ETSHPRRKMND+A
Subjt:  MASDVIRPAANGAPPLNPVQPSQRNPAPPTMCILPVTGVSWPDLQVWPP---------DQKPLSLQLDTKAYGERRSQQVTYPVCSCETSHPRRKMNDVA

Query:  AGVVNERVSHIGTKSIHAPKFILPSKDPASNTTVMAAKANWKNTQRYAGLTNKPEQSVAKCHTMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQ
        AGV+NE                +P +                  QR    TN+PEQSV +CHTMCPQHPT +H S+AIE HEG VDSPFFLHHAAIE++Q
Subjt:  AGVVNERVSHIGTKSIHAPKFILPSKDPASNTTVMAAKANWKNTQRYAGLTNKPEQSVAKCHTMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQ

Query:  PGNGLETDHGGCRELPCIVGLVVPVGS
        P N LE DHGGCRELPCIVGLVVPVG+
Subjt:  PGNGLETDHGGCRELPCIVGLVVPVGS

NP_001168343.1 uncharacterized protein LOC100382111 [Zea mays]1.2e-1226.37Show/hide
Query:  KAGLGKETCEQSPHGTSHSVCVEDAQSIVDTLKECQPSMQHHHGVPWNQTSKDAHHHGCDRWMKELTCTRSDTDKASDDPLNCTNHRAFLIK--------
        + G+G+E  EQ+     H+V V+DAQ +V  L++  P +Q HH VP +   + AHHHG  R      C   D D++ D  L+  +    L +        
Subjt:  KAGLGKETCEQSPHGTSHSVCVEDAQSIVDTLKECQPSMQHHHGVPWNQTSKDAHHHGCDRWMKELTCTRSDTDKASDDPLNCTNHRAFLIK--------

Query:  ------RLVAVQTCVFKMASDVIRPAANGAPPLNPVQPS---------QRNPAP--------PTMCILP-VTGVSWPDLQVWPPDQKPLSLQLDTKAYGE
                V V+    +     +RPAA  A P +P Q           +R P P        P  C  P        D+     D  PL  +     YGE
Subjt:  ------RLVAVQTCVFKMASDVIRPAANGAPPLNPVQPS---------QRNPAP--------PTMCILP-VTGVSWPDLQVWPPDQKPLSLQLDTKAYGE

Query:  RRSQQVTYPVCSCETSHPR-------RKMNDVAAGVVNERVSHIGTKSIHAPKFILPSKDPASNTTV-MAAKANWKN----TQRYAGLTNKPEQSVAKCH
          +  V          HPR       ++  D   G   E    +  +     +        A+   V    +A   +     QR   L  + +Q VA+ H
Subjt:  RRSQQVTYPVCSCETSHPR-------RKMNDVAAGVVNERVSHIGTKSIHAPKFILPSKDPASNTTV-MAAKANWKN----TQRYAGLTNKPEQSVAKCH

Query:  TMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPVG
         + P HP   H  + ++ HEGRV  P  LHHAA++++Q    L+      R+LP +V LV P+G
Subjt:  TMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPVG

THU62832.1 hypothetical protein C4D60_Mb01t09290 [Musa balbisiana]5.2e-0844.93Show/hide
Query:  VAKCHTMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPVG
        VAK H + P  P    C + +E HEG VD P  LH  A+E+++P + L+ D  G   LPC+V LV PVG
Subjt:  VAKCHTMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPVG

TrEMBL top hitse value%identityAlignment
A0A0P0V9V5 Os01g0831250 protein (Fragment)6.0e-1028.52Show/hide
Query:  RAFLIKRLVAVQTCVFKMASDVIRPAANGAPPLNPVQPSQRNPAPPTM--------------CILPV--------TGVSWPDLQVWPPDQKPLSLQLDT-
        R   ++RL A  T V   A D +   A GAPPLNP QPS  +P P  M               + P          G    D+     D  PL  +    
Subjt:  RAFLIKRLVAVQTCVFKMASDVIRPAANGAPPLNPVQPSQRNPAPPTM--------------CILPV--------TGVSWPDLQVWPPDQKPLSLQLDT-

Query:  KAYG---------ERRSQQVTYPVCSCETSHPRRKMNDVAAGVVNE-----RVSHIGTKSIHAPKFILPSKDPASNTTVMAAKANWKNTQRYAGLTNKPE
        +A G         ER  +     V   E     +   D     + +     RV  +G + +     +LP      +     A+      QR AGL  + E
Subjt:  KAYG---------ERRSQQVTYPVCSCETSHPRRKMNDVAAGVVNE-----RVSHIGTKSIHAPKFILPSKDPASNTTVMAAKANWKNTQRYAGLTNKPE

Query:  QSVAKCHTMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPV
        Q VA+ H    QHP  +     ++ HEGRVD P  LH AA++++QP + LE D    RELP +V  V P+
Subjt:  QSVAKCHTMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPV

A0A287G4P6 Uncharacterized protein2.3e-0925Show/hide
Query:  GKETCEQSPHGTSHSVCVEDAQSIVDTLKECQPSMQHHHGVPWNQTSKDAHHHGCDRWMKELTCTRSDTDKASDDPLNCTNHRAFLIKRLVAVQTCVFKM
        G+E  E +     H V VED Q +V   ++ +  +Q HHG P +   +DA  HG  R  +   C   D D+A    L+  + R     RL          
Subjt:  GKETCEQSPHGTSHSVCVEDAQSIVDTLKECQPSMQHHHGVPWNQTSKDAHHHGCDRWMKELTCTRSDTDKASDDPLNCTNHRAFLIKRLVAVQTCVFKM

Query:  ASDVIRPAANGAP------PLNPVQPSQRNPAPPTMCILPVTGVSWPDLQVWPPDQKPLSLQLDTKAYGERRSQQVTYPVCSCETSHPRRKMNDVAAGVV
          +  R A  G         +  V+ +   P  PT    P  G    D+       +PL + L  +A          YPV   E      +++DVAAGVV
Subjt:  ASDVIRPAANGAP------PLNPVQPSQRNPAPPTMCILPVTGVSWPDLQVWPPDQKPLSLQLDTKAYGERRSQQVTYPVCSCETSHPRRKMNDVAAGVV

Query:  NE-------------------------RVSHIGTKSIHAPKFILPSKD--------------------------PASNTTVMAAKANWKNTQRYAGLTNK
        ++                         R  H G   +H P+     +D                          P      + A       +R+AGL  +
Subjt:  NE-------------------------RVSHIGTKSIHAPKFILPSKD--------------------------PASNTTVMAAKANWKNTQRYAGLTNK

Query:  PEQSVAKCHTMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPV
         +Q +A+ H    QHP  +     +E HEG VD P  LH AA+E++QP + L+      R+LP +V LV P+
Subjt:  PEQSVAKCHTMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPV

A0A452ZBX5 Uncharacterized protein4.9e-1225.89Show/hide
Query:  GKETCEQSPHGTSHSVCVEDAQSIVDTLKECQPSMQHHHGVPWNQTSKDAHHHGCDRWMKELTCTRSDTDKASDDPLN-CTNHRAFLIKRLVAVQTCVFK
        G+E  E +     H V VED Q +V   ++ +  +Q HHG P +   +DAHHH   R  +   C   D D+A    L+   + R      + A      +
Subjt:  GKETCEQSPHGTSHSVCVEDAQSIVDTLKECQPSMQHHHGVPWNQTSKDAHHHGCDRWMKELTCTRSDTDKASDDPLN-CTNHRAFLIKRLVAVQTCVFK

Query:  MASDVIRPAANGAPPLNPVQPSQRNPAPPTMCILPVTGVSWPDLQVWPPDQKPLSLQLDTKAYGERRSQQVTYPVCSCETSHPRRKMNDVAAGVVNE---
          +DV     +G   +  V  +   P PP     P  G    D+       +PL + L  +A          +PVC  E      +++DVAAGVV++   
Subjt:  MASDVIRPAANGAPPLNPVQPSQRNPAPPTMCILPVTGVSWPDLQVWPPDQKPLSLQLDTKAYGERRSQQVTYPVCSCETSHPRRKMNDVAAGVVNE---

Query:  ----------------------RVSHIGTKSIHAPKFILPSKD--------------------------PASNTTVMAAKANWKNTQRYAGLTNKPEQSV
                              R  H G   +HA +     +D                          PA     + A       QR+A L  + +Q +
Subjt:  ----------------------RVSHIGTKSIHAPKFILPSKD--------------------------PASNTTVMAAKANWKNTQRYAGLTNKPEQSV

Query:  AKCHTMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPV
        A+ H    QHP  +     +E HEG VD P  LH AA+E++Q  +GL+      R+LP +V LV PV
Subjt:  AKCHTMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPV

C0P4G7 Uncharacterized protein5.8e-1326.37Show/hide
Query:  KAGLGKETCEQSPHGTSHSVCVEDAQSIVDTLKECQPSMQHHHGVPWNQTSKDAHHHGCDRWMKELTCTRSDTDKASDDPLNCTNHRAFLIK--------
        + G+G+E  EQ+     H+V V+DAQ +V  L++  P +Q HH VP +   + AHHHG  R      C   D D++ D  L+  +    L +        
Subjt:  KAGLGKETCEQSPHGTSHSVCVEDAQSIVDTLKECQPSMQHHHGVPWNQTSKDAHHHGCDRWMKELTCTRSDTDKASDDPLNCTNHRAFLIK--------

Query:  ------RLVAVQTCVFKMASDVIRPAANGAPPLNPVQPS---------QRNPAP--------PTMCILP-VTGVSWPDLQVWPPDQKPLSLQLDTKAYGE
                V V+    +     +RPAA  A P +P Q           +R P P        P  C  P        D+     D  PL  +     YGE
Subjt:  ------RLVAVQTCVFKMASDVIRPAANGAPPLNPVQPS---------QRNPAP--------PTMCILP-VTGVSWPDLQVWPPDQKPLSLQLDTKAYGE

Query:  RRSQQVTYPVCSCETSHPR-------RKMNDVAAGVVNERVSHIGTKSIHAPKFILPSKDPASNTTV-MAAKANWKN----TQRYAGLTNKPEQSVAKCH
          +  V          HPR       ++  D   G   E    +  +     +        A+   V    +A   +     QR   L  + +Q VA+ H
Subjt:  RRSQQVTYPVCSCETSHPR-------RKMNDVAAGVVNERVSHIGTKSIHAPKFILPSKDPASNTTV-MAAKANWKN----TQRYAGLTNKPEQSVAKCH

Query:  TMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPVG
         + P HP   H  + ++ HEGRV  P  LHHAA++++Q    L+      R+LP +V LV P+G
Subjt:  TMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPVG

C0PLV3 Uncharacterized protein2.0e-1326.65Show/hide
Query:  KAGLGKETCEQSPHGTSHSVCVEDAQSIVDTLKECQPSMQHHHGVPWNQTSKDAHHHGCDRWMKELTCTRSDTDKASDDPLNCTNHRAFLIK--------
        + G+G+E  EQ+     H+V V+DAQ +V  L++  P +Q HH VP +  S+ AHHHG  R      C   D D++ D  L+  +    L +        
Subjt:  KAGLGKETCEQSPHGTSHSVCVEDAQSIVDTLKECQPSMQHHHGVPWNQTSKDAHHHGCDRWMKELTCTRSDTDKASDDPLNCTNHRAFLIK--------

Query:  ------RLVAVQTCVFKMASDVIRPAANGAPPLNPVQPS---------QRNPAP--------PTMCILP-VTGVSWPDLQVWPPDQKPLSLQLDTKAYGE
                V V+    +     +RPAA  A P +P Q           +R P P        P  C  P        D+     D  PL  +     YGE
Subjt:  ------RLVAVQTCVFKMASDVIRPAANGAPPLNPVQPS---------QRNPAP--------PTMCILP-VTGVSWPDLQVWPPDQKPLSLQLDTKAYGE

Query:  RRSQQVTYPVCSCETSHPR-------RKMNDVAAGVVNERVSHIGTKSIHAPKFILPSKDPASNTTV-MAAKANWKN----TQRYAGLTNKPEQSVAKCH
          +  V          HPR       ++  D   G   E    +  +     +        A+   V    +A   +     QR   L  + +Q VA+ H
Subjt:  RRSQQVTYPVCSCETSHPR-------RKMNDVAAGVVNERVSHIGTKSIHAPKFILPSKDPASNTTV-MAAKANWKN----TQRYAGLTNKPEQSVAKCH

Query:  TMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPVG
         + P HP   H  + ++ HEGRV  P  LHHAA++++Q    L+      R+LP +V LV P+G
Subjt:  TMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGGCTGGGCTTGGCAAAGAAACCTGTGAGCAGTCCCCCCATGGAACCAGCCACAGCGTGTGTGTGGAAGACGCCCAGAGTATCGTCGACACACTGAAGGAATGCCAACC
TTCTATGCAGCACCATCATGGTGTACCATGGAACCAAACCAGCAAGGACGCCCATCACCACGGCTGCGACAGATGGATGAAAGAACTAACCTGCACCAGGAGTGATACAG
ACAAGGCCAGTGATGATCCCTTGAACTGCACCAATCACAGAGCTTTTCTTATCAAGAGACTTGTTGCGGTGCAAACATGTGTGTTCAAAATGGCTAGCGATGTAATACGA
CCCGCTGCAAATGGAGCTCCTCCATTGAATCCAGTCCAACCCAGCCAAAGAAACCCTGCACCGCCAACCATGTGTATTTTGCCTGTCACGGGAGTGTCGTGGCCCGACCT
GCAGGTGTGGCCACCAGATCAGAAACCATTATCACTACAACTCGATACCAAAGCATATGGAGAAAGAAGATCACAGCAAGTCACTTACCCAGTATGCAGCTGTGAAACCA
GCCACCCCAGAAGAAAGATGAATGACGTAGCCGCCGGCGTAGTCAATGAGAGAGTTAGCCACATTGGAACAAAAAGCATCCATGCACCAAAATTCATCCTTCCCAGCAAG
GACCCGGCGAGCAACACGACAGTAATGGCAGCGAAAGCAAACTGGAAAAACACACAGCGCTACGCCGGGCTTACCAACAAGCCAGAACAATCGGTCGCCAAATGCCATAC
GATGTGCCCACAACACCCAACACACAAGCACTGCAGCAAAGCCATAGAGGGCCATGAAGGCAGAGTTGACAGCCCATTTTTTCTTCACCATGCTGCCATAGAGAATAACC
AGCCCGGGAACGGTTTGGAGACCGACCATGGTGGCTGCCGTGAGCTGCCATGCATTGTCGGCCTTGTTGTTCCAGTAGGGAGTTGA
mRNA sequenceShow/hide mRNA sequence
AAGGCTGGGCTTGGCAAAGAAACCTGTGAGCAGTCCCCCCATGGAACCAGCCACAGCGTGTGTGTGGAAGACGCCCAGAGTATCGTCGACACACTGAAGGAATGCCAACC
TTCTATGCAGCACCATCATGGTGTACCATGGAACCAAACCAGCAAGGACGCCCATCACCACGGCTGCGACAGATGGATGAAAGAACTAACCTGCACCAGGAGTGATACAG
ACAAGGCCAGTGATGATCCCTTGAACTGCACCAATCACAGAGCTTTTCTTATCAAGAGACTTGTTGCGGTGCAAACATGTGTGTTCAAAATGGCTAGCGATGTAATACGA
CCCGCTGCAAATGGAGCTCCTCCATTGAATCCAGTCCAACCCAGCCAAAGAAACCCTGCACCGCCAACCATGTGTATTTTGCCTGTCACGGGAGTGTCGTGGCCCGACCT
GCAGGTGTGGCCACCAGATCAGAAACCATTATCACTACAACTCGATACCAAAGCATATGGAGAAAGAAGATCACAGCAAGTCACTTACCCAGTATGCAGCTGTGAAACCA
GCCACCCCAGAAGAAAGATGAATGACGTAGCCGCCGGCGTAGTCAATGAGAGAGTTAGCCACATTGGAACAAAAAGCATCCATGCACCAAAATTCATCCTTCCCAGCAAG
GACCCGGCGAGCAACACGACAGTAATGGCAGCGAAAGCAAACTGGAAAAACACACAGCGCTACGCCGGGCTTACCAACAAGCCAGAACAATCGGTCGCCAAATGCCATAC
GATGTGCCCACAACACCCAACACACAAGCACTGCAGCAAAGCCATAGAGGGCCATGAAGGCAGAGTTGACAGCCCATTTTTTCTTCACCATGCTGCCATAGAGAATAACC
AGCCCGGGAACGGTTTGGAGACCGACCATGGTGGCTGCCGTGAGCTGCCATGCATTGTCGGCCTTGTTGTTCCAGTAGGGAGTTGA
Protein sequenceShow/hide protein sequence
KAGLGKETCEQSPHGTSHSVCVEDAQSIVDTLKECQPSMQHHHGVPWNQTSKDAHHHGCDRWMKELTCTRSDTDKASDDPLNCTNHRAFLIKRLVAVQTCVFKMASDVIR
PAANGAPPLNPVQPSQRNPAPPTMCILPVTGVSWPDLQVWPPDQKPLSLQLDTKAYGERRSQQVTYPVCSCETSHPRRKMNDVAAGVVNERVSHIGTKSIHAPKFILPSK
DPASNTTVMAAKANWKNTQRYAGLTNKPEQSVAKCHTMCPQHPTHKHCSKAIEGHEGRVDSPFFLHHAAIENNQPGNGLETDHGGCRELPCIVGLVVPVGS