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Lsi01G005770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G005770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUPF0434 protein
Genome locationchr01:4605576..4606850
RNA-Seq ExpressionLsi01G005770
SyntenyLsi01G005770
Gene Ontology termsNA
InterPro domainsIPR005651 - Trm112-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008440859.1 PREDICTED: UPF0434 protein ECH_0194 [Cucumis melo]7.8e-3694.19Show/hide
Query:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
        MVRISKALLKEASSG T TLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPK+GRIIE DDALKGEDTVEI REK
Subjt:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
XP_011658060.1 uncharacterized protein LOC101219142 [Cucumis sativus]1.2e-3389.53Show/hide
Query:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
        MVRI+KALLKEA+SG T TLSQILVCPLSKQPLRYC ASNSLISDTIGVSFPIRDGIPCLVPK+GRIIE DDALK EDTVEI REK
Subjt:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
XP_022949957.1 uncharacterized protein LOC111453193 [Cucurbita moschata]1.9e-3489.53Show/hide
Query:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
        MVRIS++LLKEA SGLTKTLS+ILVCPLSKQPLRYCEASNSLISDTI VSFPIR G+PCLVPK+GRIIETDD LKGEDTVEIPREK
Subjt:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
XP_022977422.1 uncharacterized protein LOC111477769 isoform X2 [Cucurbita maxima]9.5e-3488.37Show/hide
Query:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
        MVRIS++LLKEA SGLTKTLS+ILVCPLSKQPLRYCEASNSLISDTI VSFPIR G+PCLVPK+G IIETDD LKGEDTVEIPREK
Subjt:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
XP_038883681.1 UPF0434 protein Ecaj_0131 [Benincasa hispida]5.1e-3591.86Show/hide
Query:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
        MV+ISKALLKEASSG TKTLS+ILVCPLSKQPLRYCEASNSLISDTI VSFPIRDGIPCLVPKDGRIIET+DALKGEDTVE+ REK
Subjt:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
TrEMBL top hitse value%identityAlignment
A0A0A0KHC1 Uncharacterized protein6.0e-3489.53Show/hide
Query:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
        MVRI+KALLKEA+SG T TLSQILVCPLSKQPLRYC ASNSLISDTIGVSFPIRDGIPCLVPK+GRIIE DDALK EDTVEI REK
Subjt:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
A0A1S3B2Q6 UPF0434 protein ECH_01943.8e-3694.19Show/hide
Query:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
        MVRISKALLKEASSG T TLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPK+GRIIE DDALKGEDTVEI REK
Subjt:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
A0A5A7SJZ8 UPF0434 protein3.8e-3694.19Show/hide
Query:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
        MVRISKALLKEASSG T TLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPK+GRIIE DDALKGEDTVEI REK
Subjt:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
A0A6J1GDI4 uncharacterized protein LOC1114531939.3e-3589.53Show/hide
Query:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
        MVRIS++LLKEA SGLTKTLS+ILVCPLSKQPLRYCEASNSLISDTI VSFPIR G+PCLVPK+GRIIETDD LKGEDTVEIPREK
Subjt:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
A0A6J1IIE0 uncharacterized protein LOC111477769 isoform X24.6e-3488.37Show/hide
Query:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
        MVRIS++LLKEA SGLTKTLS+ILVCPLSKQPLRYCEASNSLISDTI VSFPIR G+PCLVPK+G IIETDD LKGEDTVEIPREK
Subjt:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK
SwissProt top hitse value%identityAlignment
Q2T9V7 Protein preY, mitochondrial4.2e-0848Show/hide
Query:  KTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRI
        + L + LVCPLSK+PLRY  ++N LI++ +G+++PI DGIP ++P+  R+
Subjt:  KTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRI
Q5M8Z2 Protein preY, mitochondrial2.4e-1150.82Show/hide
Query:  TLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDT
        TL Q LVCPLS++ LRY E++N LI+D +G+++PI DGIP ++P+D R+I  D   +  DT
Subjt:  TLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDT
Q5U1Z8 Protein preY, mitochondrial1.1e-0853.19Show/hide
Query:  LSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGR
        L Q LVCPLSK+PLRY  ++N LI+D +G+++PI DG+P ++P+  R
Subjt:  LSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGR
Q96I23 Protein preY, mitochondrial5.5e-0850Show/hide
Query:  LSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRI
        L + LVCPLSK+PLRY  ++N LI++ +G+++PI DGIP ++P+  R+
Subjt:  LSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRI
Q9D1C3 Protein preY, mitochondrial4.2e-0851.06Show/hide
Query:  LSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGR
        L Q LVCPLSK+PLRY  ++N L+++ +G+++PI DGIP ++P+  R
Subjt:  LSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGR
Arabidopsis top hitse value%identityAlignment
AT4G35905.1 unknown protein3.0e-2569.74Show/hide
Query:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETD-DALK
        MVR+++ LLK+A + + KTLS+ILVCPLSKQPLR+CE + SL+SDTIGVSFPI+DGIPCLVPKDG+I+E + DA K
Subjt:  MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETD-DALK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGAATAAGCAAAGCGCTTTTGAAAGAAGCGAGCTCTGGTCTCACCAAAACGCTCTCCCAGATCCTGGTCTGCCCGCTCTCCAAACAACCTCTAAGATATTGTGA
GGCGTCAAATTCTCTAATCAGCGATACGATTGGTGTTTCTTTCCCTATAAGGGACGGAATTCCTTGCTTGGTGCCAAAGGATGGAAGGATAATCGAAACTGATGATGCAT
TGAAAGGTGAGGATACTGTTGAGATTCCTCGAGAAAAATGA
mRNA sequenceShow/hide mRNA sequence
CTTCCTTTCACTCCTATTCTACTTTTTACTATTATTAGCCCCACTCAATAGGTCAAACCCCCTGATTTTCTGAAAATGAAAATGAAAATTATAATAAAGTCTCTATTGCG
AATCTCCGGCCCCTGCAGTGAATTTAAACCTTTCGAAGAAGAAATTGAGACCGCGAAAAACTGAATCCAACCCAACTTTCTTCGAACTTCATTCTAAAATGGTGAGAATA
AGCAAAGCGCTTTTGAAAGAAGCGAGCTCTGGTCTCACCAAAACGCTCTCCCAGATCCTGGTCTGCCCGCTCTCCAAACAACCTCTAAGATATTGTGAGGCGTCAAATTC
TCTAATCAGCGATACGATTGGTGTTTCTTTCCCTATAAGGGACGGAATTCCTTGCTTGGTGCCAAAGGATGGAAGGATAATCGAAACTGATGATGCATTGAAAGGTGAGG
ATACTGTTGAGATTCCTCGAGAAAAATGA
Protein sequenceShow/hide protein sequence
MVRISKALLKEASSGLTKTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCLVPKDGRIIETDDALKGEDTVEIPREK