; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G006080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G006080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTransmembrane protein
Genome locationchr01:4900729..4901271
RNA-Seq ExpressionLsi01G006080
SyntenyLsi01G006080
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135030.1 uncharacterized protein LOC101202736 [Cucumis sativus]6.3e-8086.67Show/hide
Query:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR
        ME+ISLHQ  ASKPPL TINP KFSP SQ QIFFP+LRHQR LRIKPINAT TDGD+APPQVPP I PPETVEVRFRKRSRRRSKQEREDG AMGNGRPR
Subjt:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR

Query:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
        KA  E+ S K KK EEM+VAEK ME+YMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
Subjt:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG

XP_022950633.1 uncharacterized protein LOC111453672 [Cucurbita moschata]1.3e-8087.22Show/hide
Query:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR
        MEA SLH+F ASKPPLLTI+PHKFSP SQNQ+FF SLRHQ+ LRIKPINAT+TDGDSAPPQVPPAI PPETV+VRFRKRSRRRSKQE EDG AMGN   R
Subjt:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR

Query:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
        KAPVEIAS KPKK EEM++AEKA ELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTS+FKG
Subjt:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG

XP_022979054.1 uncharacterized protein LOC111478809 [Cucurbita maxima]4.9e-8086.11Show/hide
Query:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR
        ME+ SLH+F AS+PPLLTI PHKFSP SQNQ+FF SLRHQ+ LRIKPINAT+TDGDSAPPQVPP I PPETV+VRFRKRSRRRSKQE EDG AMGN R R
Subjt:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR

Query:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
        KAPVEIAS KPKK EEM++AEKA ELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTS+FKG
Subjt:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG

XP_023544554.1 uncharacterized protein LOC111804097 [Cucurbita pepo subsp. pepo]2.0e-8187.78Show/hide
Query:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR
        MEA SLH+F ASKPPLLTI+PHKFSP SQNQ+FF SLRHQ+ LRIKPINAT+TDGDSAPPQVPPAI PPETV+VRFRKRSRRRSKQE EDG AMGN R R
Subjt:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR

Query:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
        KAPVEIAS KPKK EEM++AEKA ELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTS+FKG
Subjt:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG

XP_038882758.1 uncharacterized protein LOC120073915 [Benincasa hispida]5.2e-8287.36Show/hide
Query:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQERED--GGAMGNGR
        MEAISLH+F ASKPPLLTINPHK SPIS NQIFFPSLRH RL RIKPINAT+TDGD+APP V PAI PPETVEVRFRKRSRRR KQERED  GGAMGNGR
Subjt:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQERED--GGAMGNGR

Query:  PRKAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
        PRKAPVEI S+KPKK EEM+V EKAME+YMGEKGLLFWLNKFAYASIFIMIGGW++FRFVGPSLNLYQLDTPPLSPT+VFKG
Subjt:  PRKAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG

TrEMBL top hitse value%identityAlignment
A0A0A0KME2 Uncharacterized protein3.1e-8086.67Show/hide
Query:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR
        ME+ISLHQ  ASKPPL TINP KFSP SQ QIFFP+LRHQR LRIKPINAT TDGD+APPQVPP I PPETVEVRFRKRSRRRSKQEREDG AMGNGRPR
Subjt:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR

Query:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
        KA  E+ S K KK EEM+VAEK ME+YMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
Subjt:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG

A0A1S3B215 uncharacterized protein LOC1034851198.9e-8086.67Show/hide
Query:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR
        ME+ISLHQ  ASKPPL TINP KFS  SQ QIFFPSLR QR LRIKPINAT+TDGD+APPQVPP I PPETVEVRFRKRSRRRSK+EREDG AMGNGRPR
Subjt:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR

Query:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
        KA VE++S K KK EEM+V EKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
Subjt:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG

A0A5A7SKL6 Putative transmembrane protein8.9e-8086.67Show/hide
Query:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR
        ME+ISLHQ  ASKPPL TINP KFS  SQ QIFFPSLR QR LRIKPINAT+TDGD+APPQVPP I PPETVEVRFRKRSRRRSK+EREDG AMGNGRPR
Subjt:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR

Query:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
        KA VE++S K KK EEM+V EKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
Subjt:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG

A0A6J1GFF1 uncharacterized protein LOC1114536726.2e-8187.22Show/hide
Query:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR
        MEA SLH+F ASKPPLLTI+PHKFSP SQNQ+FF SLRHQ+ LRIKPINAT+TDGDSAPPQVPPAI PPETV+VRFRKRSRRRSKQE EDG AMGN   R
Subjt:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR

Query:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
        KAPVEIAS KPKK EEM++AEKA ELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTS+FKG
Subjt:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG

A0A6J1IVM3 uncharacterized protein LOC1114788092.3e-8086.11Show/hide
Query:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR
        ME+ SLH+F AS+PPLLTI PHKFSP SQNQ+FF SLRHQ+ LRIKPINAT+TDGDSAPPQVPP I PPETV+VRFRKRSRRRSKQE EDG AMGN R R
Subjt:  MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPR

Query:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
        KAPVEIAS KPKK EEM++AEKA ELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTS+FKG
Subjt:  KAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G17972.1 unknown protein3.2e-2950Show/hide
Query:  HQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPRKAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLN
        H+   R   IN   + GD          +P + VE+RF++ SRR+    RE+G   G G+  K    +     K  EEM + EKA+ELY+GEKGLLFWLN
Subjt:  HQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPRKAPVEIASDKPKKREEMNVAEKAMELYMGEKGLLFWLN

Query:  KFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG
        K AYASI+I+IGGWI FRFVGP+ NLYQLDTPPL P ++ KG
Subjt:  KFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAATCAGTCTCCACCAATTTCCCGCTTCTAAACCACCGCTCTTAACCATCAATCCACATAAATTCTCCCCTATTTCTCAGAATCAGATCTTCTTTCCATCTCT
GCGCCACCAACGGCTTCTCAGGATCAAACCGATCAACGCCACTGAAACTGACGGCGACAGCGCGCCACCGCAGGTTCCGCCGGCAATAAAGCCTCCGGAGACGGTGGAAG
TTCGATTTCGTAAGAGGTCGAGAAGACGATCCAAACAGGAGAGGGAGGATGGAGGGGCGATGGGGAATGGGCGGCCGAGGAAGGCGCCGGTGGAGATTGCTTCCGATAAG
CCGAAGAAACGGGAGGAGATGAACGTGGCGGAGAAGGCAATGGAACTGTATATGGGAGAGAAGGGTTTGTTGTTTTGGCTCAACAAATTTGCTTATGCTTCCATTTTTAT
TATGATTGGTGGTTGGATTGTGTTTCGATTTGTTGGGCCTTCGCTCAATCTTTATCAGTTGGATACTCCACCATTGTCTCCGACTTCTGTATTCAAGGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCAATCAGTCTCCACCAATTTCCCGCTTCTAAACCACCGCTCTTAACCATCAATCCACATAAATTCTCCCCTATTTCTCAGAATCAGATCTTCTTTCCATCTCT
GCGCCACCAACGGCTTCTCAGGATCAAACCGATCAACGCCACTGAAACTGACGGCGACAGCGCGCCACCGCAGGTTCCGCCGGCAATAAAGCCTCCGGAGACGGTGGAAG
TTCGATTTCGTAAGAGGTCGAGAAGACGATCCAAACAGGAGAGGGAGGATGGAGGGGCGATGGGGAATGGGCGGCCGAGGAAGGCGCCGGTGGAGATTGCTTCCGATAAG
CCGAAGAAACGGGAGGAGATGAACGTGGCGGAGAAGGCAATGGAACTGTATATGGGAGAGAAGGGTTTGTTGTTTTGGCTCAACAAATTTGCTTATGCTTCCATTTTTAT
TATGATTGGTGGTTGGATTGTGTTTCGATTTGTTGGGCCTTCGCTCAATCTTTATCAGTTGGATACTCCACCATTGTCTCCGACTTCTGTATTCAAGGGCTAA
Protein sequenceShow/hide protein sequence
MEAISLHQFPASKPPLLTINPHKFSPISQNQIFFPSLRHQRLLRIKPINATETDGDSAPPQVPPAIKPPETVEVRFRKRSRRRSKQEREDGGAMGNGRPRKAPVEIASDK
PKKREEMNVAEKAMELYMGEKGLLFWLNKFAYASIFIMIGGWIVFRFVGPSLNLYQLDTPPLSPTSVFKG