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Lsi01G006130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G006130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR50
Genome locationchr01:4918118..4918441
RNA-Seq ExpressionLsi01G006130
SyntenyLsi01G006130
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647605.1 hypothetical protein Csa_003512 [Cucumis sativus]1.9e-5292.52Show/hide
Query:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL
        MAI+KANLLQPSASF+HILKRCSSFGKR+NGCNEDGLP+DVPKGHFAVYVGENRSRYIVPISWL+HP+FQ LLQRAEEEFGFNHDMGITIPCEEVVFRSL
Subjt:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL

Query:  TAMIKIR
        T+MIKIR
Subjt:  TAMIKIR

KAG6603919.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4889.62Show/hide
Query:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL
        MAI+K+NLLQPSAS +HILKRCSSFGKR NGCN+DGLPDDVPKGHFAVYVGENRSR+IVPISWL+HP+FQ LL RAEEEFGFNHDMGITIPCEEVVFRSL
Subjt:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL

Query:  TAMIKI
        TAMIKI
Subjt:  TAMIKI

XP_008440807.1 PREDICTED: auxin-induced protein 15A [Cucumis melo]5.7e-5291.59Show/hide
Query:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL
        MAI+KANLLQPSASF+HILKRCSSFGKR+NGCNEDGLP+DVPKGHFAVYVGENRSRYIVPISWL+HP+FQ LLQRAEEEFGFNHDMGITIPCEEVVFRSL
Subjt:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL

Query:  TAMIKIR
        T+MIK R
Subjt:  TAMIKIR

XP_022132983.1 auxin-responsive protein SAUR50 [Momordica charantia]1.3e-4888.79Show/hide
Query:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL
        MAI++ANLLQPSASF+HI+KRCSSFGKR NGCNED LPDDVPKGHFAVYVGENRSRYIVPISWL HP+FQ LLQ AEEEFGF+HDMG+TIPCEEVVFRSL
Subjt:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL

Query:  TAMIKIR
        TAMIKIR
Subjt:  TAMIKIR

XP_038883315.1 auxin-responsive protein SAUR50 [Benincasa hispida]8.7e-5394.39Show/hide
Query:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL
        MAI+KANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHF VYVGENRSRYIVPISWL+HP+FQ LLQRAEEEFGF+HDMGITIPCEEVVFRSL
Subjt:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL

Query:  TAMIKIR
        TAMIKIR
Subjt:  TAMIKIR

TrEMBL top hitse value%identityAlignment
A0A1S3B1Z6 auxin-induced protein 15A2.7e-5291.59Show/hide
Query:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL
        MAI+KANLLQPSASF+HILKRCSSFGKR+NGCNEDGLP+DVPKGHFAVYVGENRSRYIVPISWL+HP+FQ LLQRAEEEFGFNHDMGITIPCEEVVFRSL
Subjt:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL

Query:  TAMIKIR
        T+MIK R
Subjt:  TAMIKIR

A0A5D3CM97 Auxin-induced protein 15A2.7e-5291.59Show/hide
Query:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL
        MAI+KANLLQPSASF+HILKRCSSFGKR+NGCNEDGLP+DVPKGHFAVYVGENRSRYIVPISWL+HP+FQ LLQRAEEEFGFNHDMGITIPCEEVVFRSL
Subjt:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL

Query:  TAMIKIR
        T+MIK R
Subjt:  TAMIKIR

A0A6J1BXR8 auxin-responsive protein SAUR506.3e-4988.79Show/hide
Query:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL
        MAI++ANLLQPSASF+HI+KRCSSFGKR NGCNED LPDDVPKGHFAVYVGENRSRYIVPISWL HP+FQ LLQ AEEEFGF+HDMG+TIPCEEVVFRSL
Subjt:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL

Query:  TAMIKIR
        TAMIKIR
Subjt:  TAMIKIR

A0A6J1GFB5 auxin-responsive protein SAUR501.1e-4889.62Show/hide
Query:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL
        MAI+K NLLQPSAS +HILKRCSSFGKR NGCN+DGLPDDVPKGHFAVYVGENRSR+IVPISWL+HP+FQ LL RAEEEFGFNHDMGITIPCEEVVFRSL
Subjt:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL

Query:  TAMIKI
        TAMIKI
Subjt:  TAMIKI

A0A6J1IS43 auxin-responsive protein SAUR50-like1.1e-4889.62Show/hide
Query:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL
        MAI+K NLLQPSAS +HILKRCSSFGKR NGCN+DGLPDDVPKGHFAVYVGENRSR+IVPISWL+HP+FQ LL RAEEEFGFNHDMGITIPCEEVVFRSL
Subjt:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSL

Query:  TAMIKI
        TAMIKI
Subjt:  TAMIKI

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR501.6e-3669.23Show/hide
Query:  IRKANLLQPSASFKHILKRCSSFGKRS-NGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLT
        ++K + L  +A  K ILKRCSS GK++  G +ED LP DVPKGHF VYVGENRSRYIVPIS+L+HPEFQ LLQRAEEEFGF+HDMG+TIPC+E+VF++LT
Subjt:  IRKANLLQPSASFKHILKRCSSFGKRS-NGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLT

Query:  AMIK
        +MI+
Subjt:  AMIK

P0DKL1 Auxin-responsive protein SAUR501.5e-3163.73Show/hide
Query:  IRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTA
        IRK++    + + K I+K+CSSFGK +   ++ GLP+DVPKGHF VYVGE R+RYIVPIS L HP FQ LLQR+EEEFGFNHDMGI IPC+EV F S  +
Subjt:  IRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTA

Query:  MI
        MI
Subjt:  MI

P33081 Auxin-induced protein 15A1.4e-1648.75Show/hide
Query:  GKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDM-GITIPCEEVVFRSLTAMI
        G R  G  +     D PKG+ AVYVGE   R+++P+S+L+ P FQ LL +AEEEFG++H M G+TIPC E VF+ +T+ +
Subjt:  GKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDM-GITIPCEEVVFRSLTAMI

P33082 Auxin-induced protein X154.0e-1647.5Show/hide
Query:  GKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDM-GITIPCEEVVFRSLTAMI
        G R  G  +     D PKG+ AVYVGE   R+++P+S+++ P FQ LL +AEEEFG++H M G+TIPC E VF+ +T  +
Subjt:  GKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDM-GITIPCEEVVFRSLTAMI

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 104.7e-3364.29Show/hide
Query:  MAIRKANLLQPS--ASFKHILKRCSSFGKRS--NGC---NEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCE
        MAI++++    S  AS K I+KRCSS  K    NGC    ED LP DVPKGHF VYVG NRSRYIVPISWL H EFQ LL+ AEEEFGF+HDMG+TIPC+
Subjt:  MAIRKANLLQPS--ASFKHILKRCSSFGKRS--NGC---NEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCE

Query:  EVVFRSLTAMIK
        EV FRSL +M +
Subjt:  EVVFRSLTAMIK

Arabidopsis top hitse value%identityAlignment
AT1G75580.1 SAUR-like auxin-responsive protein family1.4e-3767.59Show/hide
Query:  MAIRKANLLQPSASFKHILKRCSSFGKRSN---GCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVF
        MA++KAN L  +A  K ILKRCSS GK+ +   G +E+G P +VPKGHF VYVGENR RY+VPIS+L+ PEFQ LLQ+AEEEFGF+HDMG+TIPCEEVVF
Subjt:  MAIRKANLLQPSASFKHILKRCSSFGKRSN---GCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVF

Query:  RSLTAMIK
        RSLT+M++
Subjt:  RSLTAMIK

AT2G18010.1 SAUR-like auxin-responsive protein family3.3e-3464.29Show/hide
Query:  MAIRKANLLQPS--ASFKHILKRCSSFGKRS--NGC---NEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCE
        MAI++++    S  AS K I+KRCSS  K    NGC    ED LP DVPKGHF VYVG NRSRYIVPISWL H EFQ LL+ AEEEFGF+HDMG+TIPC+
Subjt:  MAIRKANLLQPS--ASFKHILKRCSSFGKRS--NGC---NEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCE

Query:  EVVFRSLTAMIK
        EV FRSL +M +
Subjt:  EVVFRSLTAMIK

AT2G21220.1 SAUR-like auxin-responsive protein family5.0e-3871.43Show/hide
Query:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGC-NEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRS
        MA+++++ L  +A  K ILKRCSS  K  N C +EDGLP DVPKGHF VYVGE RSRYIVPIS+L+HP+F+ LLQ+AEEEFGFNHDMG+TIPCEEVVFRS
Subjt:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGC-NEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRS

Query:  LTAMI
        LT+MI
Subjt:  LTAMI

AT4G34760.1 SAUR-like auxin-responsive protein family1.1e-3769.23Show/hide
Query:  IRKANLLQPSASFKHILKRCSSFGKRS-NGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLT
        ++K + L  +A  K ILKRCSS GK++  G +ED LP DVPKGHF VYVGENRSRYIVPIS+L+HPEFQ LLQRAEEEFGF+HDMG+TIPC+E+VF++LT
Subjt:  IRKANLLQPSASFKHILKRCSSFGKRS-NGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLT

Query:  AMIK
        +MI+
Subjt:  AMIK

AT4G38860.1 SAUR-like auxin-responsive protein family5.1e-3567.29Show/hide
Query:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGC-NEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDM-GITIPCEEVVFR
        MA+++++ L  +A  K ILKRCSS GK+   C +E+GLP DVPKGHF VYVGE R+RYIVPIS+L+HPEF  LLQ+AEEEFGF HDM G+TIPCEEVVF 
Subjt:  MAIRKANLLQPSASFKHILKRCSSFGKRSNGC-NEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDM-GITIPCEEVVFR

Query:  SLTAMIK
        SLT+MI+
Subjt:  SLTAMIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATCAGAAAGGCTAATCTACTTCAGCCCTCTGCCTCCTTTAAACATATTCTCAAAAGATGTTCAAGCTTTGGCAAGAGATCAAATGGCTGCAATGAAGATGGTCT
CCCCGACGATGTCCCGAAAGGCCATTTCGCCGTCTACGTCGGAGAAAACCGAAGCCGATACATTGTTCCGATATCGTGGCTCTCTCATCCAGAGTTCCAAAGGCTGCTGC
AGAGAGCAGAGGAGGAGTTTGGTTTCAACCATGACATGGGAATCACTATCCCTTGTGAAGAAGTTGTTTTTCGCTCCTTAACTGCTATGATTAAGATCAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTATCAGAAAGGCTAATCTACTTCAGCCCTCTGCCTCCTTTAAACATATTCTCAAAAGATGTTCAAGCTTTGGCAAGAGATCAAATGGCTGCAATGAAGATGGTCT
CCCCGACGATGTCCCGAAAGGCCATTTCGCCGTCTACGTCGGAGAAAACCGAAGCCGATACATTGTTCCGATATCGTGGCTCTCTCATCCAGAGTTCCAAAGGCTGCTGC
AGAGAGCAGAGGAGGAGTTTGGTTTCAACCATGACATGGGAATCACTATCCCTTGTGAAGAAGTTGTTTTTCGCTCCTTAACTGCTATGATTAAGATCAGATGA
Protein sequenceShow/hide protein sequence
MAIRKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFAVYVGENRSRYIVPISWLSHPEFQRLLQRAEEEFGFNHDMGITIPCEEVVFRSLTAMIKIR