; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G006140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G006140
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description60S ribosomal protein L8
Genome locationchr01:4926250..4928193
RNA-Seq ExpressionLsi01G006140
SyntenyLsi01G006140
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002171 - Ribosomal protein L2
IPR008991 - Translation protein SH3-like domain superfamily
IPR012340 - Nucleic acid-binding, OB-fold
IPR014722 - Ribosomal protein L2, domain 2
IPR014726 - Ribosomal protein L2, domain 3
IPR022666 - Ribosomal Proteins L2, RNA binding domain
IPR022669 - Ribosomal protein L2, C-terminal
IPR022671 - Ribosomal protein L2, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134871.1 60S ribosomal protein L8-3 [Cucumis sativus]1.0e-14799.23Show/hide
Query:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+RSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSG+KKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

XP_008440805.1 PREDICTED: 60S ribosomal protein L8-3 [Cucumis melo]1.7e-14799.23Show/hide
Query:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVF+SHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSG+KKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

XP_010113368.1 60S ribosomal protein L8-3 [Morus notabilis]5.6e-14696.92Show/hide
Query:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGV+T+IIHDPGRGAPLA+VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKA LVVGN
Subjt:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLPIRSIPEGAV+CNVEHHVGDRGVFARCSGDYA+VISHNPDNDTSRIKLPSG+KKIVPSGCRAM+GQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

XP_022133211.1 60S ribosomal protein L8 [Momordica charantia]6.6e-14797.69Show/hide
Query:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGV+TEI+HDPGRGAPLARV+FRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANL+VGN
Subjt:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+RSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKK+VPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

XP_023003927.1 60S ribosomal protein L8-3 [Cucurbita maxima]2.5e-14697.69Show/hide
Query:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVV+EIIHDPGRGAPLARV+FRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANL+VGN
Subjt:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+RSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKK+VPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATA+KADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

TrEMBL top hitse value%identityAlignment
A0A0A0KKM7 Ribosomal_L2_C domain-containing protein5.0e-14899.23Show/hide
Query:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+RSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSG+KKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

A0A1S3B1I8 60S ribosomal protein L8-38.5e-14899.23Show/hide
Query:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVF+SHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSG+KKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

A0A5D3CL65 60S ribosomal protein L8-38.5e-14899.23Show/hide
Query:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVF+SHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
Subjt:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSG+KKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

A0A6J1BUD7 60S ribosomal protein L83.2e-14797.69Show/hide
Query:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGV+TEI+HDPGRGAPLARV+FRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANL+VGN
Subjt:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+RSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKK+VPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

A0A6J1KNZ2 60S ribosomal protein L8-31.2e-14697.69Show/hide
Query:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVV+EIIHDPGRGAPLARV+FRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANL+VGN
Subjt:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+RSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKK+VPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
Subjt:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATA+KADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

SwissProt top hitse value%identityAlignment
P25998 60S ribosomal protein L81.3e-14091.92Show/hide
Query:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
        MGR+IRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGV+TE+IHDPGRGAPLARV+FR+PFRY  Q ELFVAAEGMYTGQFVYCGKKA L+VGN
Subjt:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+RSIPEGAVVCNVEH VGDRGVFARCSG YAIVISHNPDN T+RIKLPSGSKKIVPSGCR M+GQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVR
Subjt:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTV RDAPPGQKVGLIA RRTGRLRGQAAATAAKADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

P29766 60S ribosomal protein L81.6e-14393.08Show/hide
Query:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFKSHTHHRKGPARFR+LDFGERNGYLKGV+TE+IHDPGRGAPLARV+FRHPFRYK Q ELFVAAEGMYTGQFVYCGKKA L+VGN
Subjt:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+RSIPEGAVVCNVEH VGDRGVFARCSGDYAIVISHNPDN T+R+KLPSG+KKIVPSGCRAM+GQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVR
Subjt:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQA ATAAKADKA
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA

P46286 60S ribosomal protein L8-18.7e-14293.41Show/hide
Query:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVVTEIIHDPGRGAPLARV+FRHPFR+KKQ ELFVAAEGMYTGQF+YCGKKA LVVGN
Subjt:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+RSIPEGAVVCNVEHHVGDRGV AR SGDYAIVI+HNPD+DT+RIKLPSGSKKIVPSGCRAM+GQVAGGGRTEKP+LKAGNAYHK+RVKRN WPKVR
Subjt:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAA+AAKAD
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

Q42064 60S ribosomal protein L8-32.1e-14393.8Show/hide
Query:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVVTEIIHDPGRGAPLARV+FRHPFR+KKQ ELFVAAEGMYTGQF+YCGKKA LVVGN
Subjt:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+RSIPEGAV+CNVEHHVGDRGVFAR SGDYAIVI+HNPDNDTSRIKLPSGSKKIVPSGCRAM+GQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVR
Subjt:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAARRTGRLRGQAAA A+KAD
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

Q4PSL7 60S ribosomal protein L8-21.9e-12884.94Show/hide
Query:  MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVG
        MGRVIRAQRKG AGSVFKSHTHHRKGPA+FRSLD+GERNGYLKG+VTEIIHDPGRGAPLARV+FRHPFRY KQ ELFVAAEGMYTGQ++YCGKKANL+VG
Subjt:  MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVG

Query:  NVLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV
        NVLP+ SIPEGAV+CNVE HVGDRG  AR SGDYAIVI+HNP+++T+R+KLPSGSKKI+PS CRAM+GQVAGGGRTEKPLLKAGNAYHK++ KRNCWP V
Subjt:  NVLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV

Query:  RGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        RGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IAARRTGR RG AA  AAKAD
Subjt:  RGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

Arabidopsis top hitse value%identityAlignment
AT2G18020.1 Ribosomal protein L2 family6.2e-14393.41Show/hide
Query:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVVTEIIHDPGRGAPLARV+FRHPFR+KKQ ELFVAAEGMYTGQF+YCGKKA LVVGN
Subjt:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+RSIPEGAVVCNVEHHVGDRGV AR SGDYAIVI+HNPD+DT+RIKLPSGSKKIVPSGCRAM+GQVAGGGRTEKP+LKAGNAYHK+RVKRN WPKVR
Subjt:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAA+AAKAD
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

AT3G51190.1 Ribosomal protein L2 family1.3e-12984.94Show/hide
Query:  MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVG
        MGRVIRAQRKG AGSVFKSHTHHRKGPA+FRSLD+GERNGYLKG+VTEIIHDPGRGAPLARV+FRHPFRY KQ ELFVAAEGMYTGQ++YCGKKANL+VG
Subjt:  MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVG

Query:  NVLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV
        NVLP+ SIPEGAV+CNVE HVGDRG  AR SGDYAIVI+HNP+++T+R+KLPSGSKKI+PS CRAM+GQVAGGGRTEKPLLKAGNAYHK++ KRNCWP V
Subjt:  NVLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKV

Query:  RGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        RGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IAARRTGR RG AA  AAKAD
Subjt:  RGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

AT4G36130.1 Ribosomal protein L2 family1.5e-14493.8Show/hide
Query:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN
        MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVVTEIIHDPGRGAPLARV+FRHPFR+KKQ ELFVAAEGMYTGQF+YCGKKA LVVGN
Subjt:  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGN

Query:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR
        VLP+RSIPEGAV+CNVEHHVGDRGVFAR SGDYAIVI+HNPDNDTSRIKLPSGSKKIVPSGCRAM+GQVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVR
Subjt:  VLPIRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVR

Query:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD
        GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAARRTGRLRGQAAA A+KAD
Subjt:  GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKAD

ATCG00830.1 ribosomal protein L21.9e-2230.23Show/hide
Query:  VIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLP
        +I A+ +G G        H++    +R +DF      + G +  I +DP R A +  + +        +    +   G   G  +  G +  + +GN LP
Subjt:  VIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLP

Query:  IRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKV
        +  +P G  + N+E  +G  G  AR +G  A +I+   +  ++ +KLPSG  +++   C A VGQV   G  +K L +AG+          CW    P V
Subjt:  IRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKV

Query:  RGVAMNPVEHPHGGG
        RGV MNPV+HPHGGG
Subjt:  RGVAMNPVEHPHGGG

ATCG01310.1 ribosomal protein L21.9e-2230.23Show/hide
Query:  VIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLP
        +I A+ +G G        H++    +R +DF      + G +  I +DP R A +  + +        +    +   G   G  +  G +  + +GN LP
Subjt:  VIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLP

Query:  IRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKV
        +  +P G  + N+E  +G  G  AR +G  A +I+   +  ++ +KLPSG  +++   C A VGQV   G  +K L +AG+          CW    P V
Subjt:  IRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKV

Query:  RGVAMNPVEHPHGGG
        RGV MNPV+HPHGGG
Subjt:  RGVAMNPVEHPHGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGAGTCATTCGTGCTCAGCGTAAGGGAGCGGGATCCGTCTTCAAGTCCCATACCCATCATCGGAAGGGCCCGGCCAGGTTCAGAAGTCTCGATTTTGGCGAACG
AAATGGTTATCTGAAAGGAGTCGTCACTGAGATTATTCACGACCCTGGCCGTGGAGCGCCGCTTGCTCGAGTTTCCTTCCGCCATCCTTTCAGGTACAAGAAACAGAATG
AGCTGTTCGTTGCTGCTGAGGGTATGTACACTGGCCAATTTGTTTACTGTGGGAAGAAAGCAAATCTCGTGGTTGGAAACGTCTTGCCCATAAGATCGATCCCTGAAGGT
GCCGTCGTCTGCAATGTCGAACACCATGTCGGTGACCGTGGTGTTTTTGCCAGGTGCTCAGGAGACTACGCGATTGTTATCAGTCACAATCCCGATAATGATACTTCCAG
GATCAAGCTTCCATCTGGTTCGAAGAAAATAGTTCCAAGTGGGTGCCGTGCCATGGTTGGTCAGGTTGCAGGTGGAGGTAGAACTGAGAAACCTCTTTTGAAGGCTGGTA
ATGCTTATCATAAATTTAGAGTGAAGAGGAATTGCTGGCCTAAGGTGCGTGGTGTTGCAATGAATCCCGTTGAGCATCCTCACGGAGGAGGTAACCATCAACATATTGGA
CATGCCAGCACAGTCAGACGTGATGCACCTCCTGGTCAAAAGGTTGGTCTTATTGCAGCCAGAAGAACTGGTAGGCTCAGAGGACAAGCTGCAGCAACCGCCGCTAAAGC
TGATAAGGCTTAG
mRNA sequenceShow/hide mRNA sequence
CGGTAACGAACTGAAAATCTCCGATCTCGCGGAGCCGCCATGGGAAGAGTCATTCGTGCTCAGCGTAAGGGAGCGGGATCCGTCTTCAAGTCCCATACCCATCATCGGAA
GGGCCCGGCCAGGTTCAGAAGTCTCGATTTTGGCGAACGAAATGGTTATCTGAAAGGAGTCGTCACTGAGATTATTCACGACCCTGGCCGTGGAGCGCCGCTTGCTCGAG
TTTCCTTCCGCCATCCTTTCAGGTACAAGAAACAGAATGAGCTGTTCGTTGCTGCTGAGGGTATGTACACTGGCCAATTTGTTTACTGTGGGAAGAAAGCAAATCTCGTG
GTTGGAAACGTCTTGCCCATAAGATCGATCCCTGAAGGTGCCGTCGTCTGCAATGTCGAACACCATGTCGGTGACCGTGGTGTTTTTGCCAGGTGCTCAGGAGACTACGC
GATTGTTATCAGTCACAATCCCGATAATGATACTTCCAGGATCAAGCTTCCATCTGGTTCGAAGAAAATAGTTCCAAGTGGGTGCCGTGCCATGGTTGGTCAGGTTGCAG
GTGGAGGTAGAACTGAGAAACCTCTTTTGAAGGCTGGTAATGCTTATCATAAATTTAGAGTGAAGAGGAATTGCTGGCCTAAGGTGCGTGGTGTTGCAATGAATCCCGTT
GAGCATCCTCACGGAGGAGGTAACCATCAACATATTGGACATGCCAGCACAGTCAGACGTGATGCACCTCCTGGTCAAAAGGTTGGTCTTATTGCAGCCAGAAGAACTGG
TAGGCTCAGAGGACAAGCTGCAGCAACCGCCGCTAAAGCTGATAAGGCTTAGACAGTATTATAATTTAGATTGTTACTTTGGTTTTGAGGTCATTTCATTTTACTTTTAT
CTATCAATTTTTCCAAGACTGGTCGTGTACGCCCAATCCAACTTTTTGAGAAACTTTTATTTAGTTCCGGTGTTTACATTTTGAAATTTTGTTTTGATTTTCCCCCCGTA
TAAGTTGGTCAATATTTATATATTTGGTAGATTCTTATGAAGTTTTCTTTGGTGTTCACATTGTCTTGAAGGGTTTACTACTTTGATCAGAAGTTTTGTTGTGGTTAAA
Protein sequenceShow/hide protein sequence
MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPIRSIPEG
AVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG
HASTVRRDAPPGQKVGLIAARRTGRLRGQAAATAAKADKA