; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G006170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G006170
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHistone H1
Genome locationchr01:4940151..4941473
RNA-Seq ExpressionLsi01G006170
SyntenyLsi01G006170
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR005819 - Linker histone H1/H5
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647604.1 hypothetical protein Csa_003640 [Cucumis sativus]9.4e-7586.12Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGEA           V+VPA EEPKE EK PVKEKKPRA REKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAP
        LALQLKNSTAKGKLTKIKASYKLSETG KK+ NATKVAKANAEKKTKQARTTR+TGRKRKAVK +E  SKA   VKKVVAKKPKRSTPAKPKQPKSI++P
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAP

Query:  AAKRAKKAV
        AAKRAKKAV
Subjt:  AAKRAKKAV

XP_004134874.1 histone H1 [Cucumis sativus]1.4e-8190.95Show/hide
Query:  MSSTGE-AEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
        MSSTGE AEVKVPAEDV PVEVPA EEPKE EK PVKEKKPRA REKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
Subjt:  MSSTGE-AEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK

Query:  ILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRA
        ILALQLKNSTAKGKLTKIKASYKLSETG KK+ NATKVAKANAEKKTKQARTTR+TGRKRKAVK +E  SKA   VKKVVAKKPKRSTPAKPKQPKSI++
Subjt:  ILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRA

Query:  PAAKRAKKAV
        PAAKRAKKAV
Subjt:  PAAKRAKKAV

XP_008440801.1 PREDICTED: histone H1 [Cucumis melo]1.5e-8090.52Show/hide
Query:  MSSTGE-AEVKVPAEDVPPVE-VPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
        M+STGE AEVKVPAEDV PVE VPA EEPKE EK PVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
Subjt:  MSSTGE-AEVKVPAEDVPPVE-VPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR

Query:  KILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIR
        KILALQLKNSTAKGKLTKIKASYKLSE G KK+KNATKVAKANAEK TKQARTTR+TGRKRKAVKK+E  SKA   VKKVVAKKPKRSTPAKPKQPKSI+
Subjt:  KILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIR

Query:  APAAKRAKKAV
        +PAAKRAKKAV
Subjt:  APAAKRAKKAV

XP_022950733.1 histone H1 [Cucurbita moschata]2.1e-7485.24Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGEAEVKVPAED P VEVP+AEE KEAEK PV+EKK R PREKKPRQSKVASHPPYFQMI EAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAP
        LALQLKNSTAKGKL KIKASY+LSE G KK+K A+KVAKANAEKKTKQARTTR+T  KR    KDE ASKA K +KKVVAKKPKR+TPAKPKQPKSIR+P
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAP

Query:  AAKRAKKAVA
        AAKRAKKAVA
Subjt:  AAKRAKKAVA

XP_038883821.1 histone H1 [Benincasa hispida]4.7e-9094.76Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSS GEAEVKVPAEDVPPV VPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAP
        L+LQLKNSTAKGKLTKIKASYKLSETG KK+KNATKVAKANAEKKTKQARTTR+TGRKRKAVKKDE ASKA K VKKVVAKKPKRSTPAKPK PKSIR+P
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAP

Query:  AAKRAKKAVA
        AAKRAKKAVA
Subjt:  AAKRAKKAVA

TrEMBL top hitse value%identityAlignment
A0A0A0KJB6 Histone H16.6e-8290.95Show/hide
Query:  MSSTGE-AEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
        MSSTGE AEVKVPAEDV PVEVPA EEPKE EK PVKEKKPRA REKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
Subjt:  MSSTGE-AEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK

Query:  ILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRA
        ILALQLKNSTAKGKLTKIKASYKLSETG KK+ NATKVAKANAEKKTKQARTTR+TGRKRKAVK +E  SKA   VKKVVAKKPKRSTPAKPKQPKSI++
Subjt:  ILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRA

Query:  PAAKRAKKAV
        PAAKRAKKAV
Subjt:  PAAKRAKKAV

A0A1S3B1Z2 histone H17.3e-8190.52Show/hide
Query:  MSSTGE-AEVKVPAEDVPPVE-VPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
        M+STGE AEVKVPAEDV PVE VPA EEPKE EK PVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
Subjt:  MSSTGE-AEVKVPAEDVPPVE-VPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR

Query:  KILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIR
        KILALQLKNSTAKGKLTKIKASYKLSE G KK+KNATKVAKANAEK TKQARTTR+TGRKRKAVKK+E  SKA   VKKVVAKKPKRSTPAKPKQPKSI+
Subjt:  KILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIR

Query:  APAAKRAKKAV
        +PAAKRAKKAV
Subjt:  APAAKRAKKAV

A0A5A7SK97 Histone H17.3e-8190.52Show/hide
Query:  MSSTGE-AEVKVPAEDVPPVE-VPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
        M+STGE AEVKVPAEDV PVE VPA EEPKE EK PVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
Subjt:  MSSTGE-AEVKVPAEDVPPVE-VPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR

Query:  KILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIR
        KILALQLKNSTAKGKLTKIKASYKLSE G KK+KNATKVAKANAEK TKQARTTR+TGRKRKAVKK+E  SKA   VKKVVAKKPKRSTPAKPKQPKSI+
Subjt:  KILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIR

Query:  APAAKRAKKAV
        +PAAKRAKKAV
Subjt:  APAAKRAKKAV

A0A6J1GFQ2 histone H11.0e-7485.24Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGEAEVKVPAED P VEVP+AEE KEAEK PV+EKK R PREKKPRQSKVASHPPYFQMI EAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAP
        LALQLKNSTAKGKL KIKASY+LSE G KK+K A+KVAKANAEKKTKQARTTR+T  KR    KDE ASKA K +KKVVAKKPKR+TPAKPKQPKSIR+P
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAP

Query:  AAKRAKKAVA
        AAKRAKKAVA
Subjt:  AAKRAKKAVA

A0A6J1IMR2 histone H13.0e-7484.29Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGE EVKVPAED P  EVP+AEEPKEAEK PV+EKK R PREKKPRQSKVASHPPYFQMI EAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAP
        LALQLKNSTAKGKL KIKASY+LSE G KK+K A+KVAKANAEK TKQARTTR+T  KR    KDE ASK  K VKKVVAKKPKR+TPAKPKQPKSIR+P
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAP

Query:  AAKRAKKAVA
        AAKRAKKAVA
Subjt:  AAKRAKKAVA

SwissProt top hitse value%identityAlignment
P08283 Histone H11.3e-1845.79Show/hide
Query:  EVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKA
        EVP  EEPK   +   K K  +  +  KPR    ASHP Y +MI +AI SL EKNGSS YAIAK++EEK K  LPANF+K+L   LK + A GKL K+K 
Subjt:  EVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKA

Query:  SYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAPAAKRAKKAV
        S+KLS      +K A    KA    K K  +   +   K KAV K +VASKA     K VA KPK++  AKPK   +   P A + K  V
Subjt:  SYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAPAAKRAKKAV

P23444 Histone H14.6e-1640.57Show/hide
Query:  STGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILA
        +T   E   P  D  P     A     A+    K KK  AP+++        +H PY +M++EAI+SL E+ GSS YAIAK++E+KHKA LP NFRK+L 
Subjt:  STGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILA

Query:  LQLKNSTAKGKLTKIKASYKLSETGM--KKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKR--STPAKPKQPKSIR
        +QLK   A GKLTK+K SYKLS       K K A K  K  A+K    A+    T  K K   K + A+K    VK     KPK   +  AKPK   +  
Subjt:  LQLKNSTAKGKLTKIKASYKLSETGM--KKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKR--STPAKPKQPKSIR

Query:  APAAKRAKKAVA
         P AK+A +A A
Subjt:  APAAKRAKKAVA

P27806 Histone H11.0e-1841.95Show/hide
Query:  AEVKVPAEDV---PPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL
        A++ VP  +V     V+ PAA   K A+ P   + K   P  KKPR +   +HP Y +M++EAI++L E++GSS  AI K++E+KHKA LPANFRKIL  
Subjt:  AEVKVPAEDV---PPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL

Query:  QLKNSTAKGKLTKIKASYKLS--------ETGMKKEKNATKVAKANAEK-------KTKQARTTRSTGRKRKAVKKDEVASK---AVKPVKKVVAKK-PK
        Q+K   A GKLTK+K SYKL+        +T  KK+  A   AKA A+K       K   A+       K KAV K + A+K   A KP  K  AKK P 
Subjt:  QLKNSTAKGKLTKIKASYKLS--------ETGMKKEKNATKVAKANAEK-------KTKQARTTRSTGRKRKAVKKDEVASK---AVKPVKKVVAKK-PK

Query:  RSTPAKP--KQPKSIRA-----------PAAKRAKK
         +TP KP  ++P + RA           PAAK+AKK
Subjt:  RSTPAKP--KQPKSIRA-----------PAAKRAKK

P40267 Histone H12.2e-4256.19Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        M++ GE E        P V     E  K  E+ P  +KKPRAP+EKKP+ +K  +HPPYFQMI EA+ +LNEK GSSPYA+AKYME+KHK  LPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGMKKEKNAT---KVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSI
        L LQLKNS AKGKL KIKASYKLSE G K+    T   K+ KA+++KK +  R T +  +K +  KK    +KA    KKV AK+ ++STPAK KQPKSI
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGMKKEKNAT---KVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSI

Query:  RAPAAKRAKK
        ++PAAKRAKK
Subjt:  RAPAAKRAKK

Q08864 Histone H1-I3.0e-1538.89Show/hide
Query:  MSSTGEAEVKVP-AEDVPPVEVPAAEEPK----EAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKH-KAVLP
        MS T  A V  P AE  P  E P A+ PK    +  K P   K+P+AP+EKKP+ +   +HPPY +M+ +AI++L E+NGSS  A+ K++E K+ K +  
Subjt:  MSSTGEAEVKVP-AEDVPPVEVPAAEEPK----EAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKH-KAVLP

Query:  ANFRKILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNAT-KVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAV-KPVKKVVAKKPKRSTPAKPK
         NF K L+  +K     GKL K+K S+KLSE    K K +T K AKA+ E K K+   + +  +K +AVKK +   + V +P K+   K  K+    K +
Subjt:  ANFRKILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNAT-KVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAV-KPVKKVVAKKPKRSTPAKPK

Query:  QPKSIRAPAAKRAKKA
        +PK    P +   KKA
Subjt:  QPKSIRAPAAKRAKKA

Arabidopsis top hitse value%identityAlignment
AT1G06760.1 winged-helix DNA-binding transcription factor family protein9.9e-1441.15Show/hide
Query:  GEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQ
        G      P  D    + PAA+  K      VKEKK  A     P++  V+SHP Y +MI +AI +L E+ GSS YAI K++EEK K  LP  FRK+L L 
Subjt:  GEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQ

Query:  LKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPK----RSTPAKPKQPKSIRAP
        LK   A GKL K+KAS+KL     K         KA AE K+  A+   +T    KA +K   ASKA    KK +A KPK    +   AK K     RA 
Subjt:  LKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPK----RSTPAKPKQPKSIRAP

Query:  AAKRAKKAV
        AA   +KAV
Subjt:  AAKRAKKAV

AT2G18050.1 histone H1-36.6e-2648.55Show/hide
Query:  RAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKA
        + P  KKPR+ K  +HPPYFQMI EA+  L EKNGSSPYAIAK +EEKHK++LP +FRK L+LQLKNS AKGKL KI+ASYKLS+T     +   K  K 
Subjt:  RAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKA

Query:  NAEKKTKQ--ARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAPAA-KRAKKAVA
        N +++ K+   RT  S+ R +K V                V K+ K+    K +QPKSI++    K+A KA A
Subjt:  NAEKKTKQ--ARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAPAA-KRAKKAVA

AT2G18050.2 histone H1-31.7e-1847.37Show/hide
Query:  MINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQ--ARTTRSTGRKR
        MI EA+  L EKNGSSPYAIAK +EEKHK++LP +FRK L+LQLKNS AKGKL KI+ASYKLS+T     +   K  K N +++ K+   RT  S+ R +
Subjt:  MINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQ--ARTTRSTGRKR

Query:  KAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAPAA-KRAKKAVA
        K V                V K+ K+    K +QPKSI++    K+A KA A
Subjt:  KAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAPAA-KRAKKAVA

AT2G30620.1 winged-helix DNA-binding transcription factor family protein3.9e-1035.14Show/hide
Query:  TGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL
        +G A+  V + +  P       +     K   K  K  AP +KK      +SHP Y +MI +AI +L E+ GSS YAI K++EEKHK+ LP  FRK+L +
Subjt:  TGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL

Query:  QLKNSTAKGKLTKIKASYKL--------SETGMKKEKNAT-------KVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTP
         LK   A  KL K+KAS+K+         +     +K AT       KVA A A  K K A    + G K+ A K    A    KP  KV A KPK  + 
Subjt:  QLKNSTAKGKLTKIKASYKL--------SETGMKKEKNAT-------KVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTP

Query:  AKPKQPKSIRAPAAKRAKKAVA
        A   + K++ A    + + A A
Subjt:  AKPKQPKSIRAPAAKRAKKAVA

AT2G30620.2 winged-helix DNA-binding transcription factor family protein2.3e-1038.14Show/hide
Query:  TGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL
        +G A+  V + +  P       +     K   K  K  AP +KK      +SHP Y +MI +AI +L E+ GSS YAI K++EEKHK+ LP  FRK+L +
Subjt:  TGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL

Query:  QLKNSTAKGKLTKIKASYKL-SETGMKKEKNATKV-AKANAEKKTKQART-TRSTGRKRKAVKKDEVASKAVKPVKKVVAKKP-KRSTPAKPKQ
         LK   A  KL K+KAS+K+ S       K A  V  KA    K K +RT TR++  K+ A    +VA     P K V  K P KR++  K K+
Subjt:  QLKNSTAKGKLTKIKASYKL-SETGMKKEKNATKV-AKANAEKKTKQART-TRSTGRKRKAVKKDEVASKAVKPVKKVVAKKP-KRSTPAKPKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCAACCGGAGAGGCTGAAGTGAAAGTTCCGGCGGAGGATGTTCCTCCTGTGGAGGTTCCGGCTGCAGAGGAGCCGAAGGAGGCCGAGAAGCCGCCGGTGAAGGA
GAAGAAACCTAGGGCTCCGAGGGAGAAGAAGCCAAGGCAGTCTAAAGTTGCTTCACATCCACCGTATTTTCAGATGATCAATGAAGCAATCTCGTCGCTCAACGAGAAGA
ATGGATCGAGTCCGTACGCTATAGCGAAATACATGGAGGAGAAACACAAGGCGGTTCTACCAGCGAATTTCAGGAAAATCTTGGCTCTGCAATTGAAGAATTCCACCGCT
AAAGGAAAACTAACGAAGATCAAGGCATCGTATAAGCTGTCCGAAACGGGAATGAAGAAAGAGAAGAACGCAACGAAGGTCGCAAAAGCGAACGCAGAGAAGAAAACTAA
ACAGGCAAGAACGACAAGAAGTACTGGAAGGAAGAGGAAGGCGGTGAAGAAGGACGAGGTGGCGAGTAAAGCGGTGAAGCCGGTGAAGAAGGTTGTTGCAAAGAAACCGA
AAAGATCAACTCCGGCGAAGCCAAAACAGCCGAAATCAATCAGGGCCCCTGCTGCGAAGAGGGCTAAGAAAGCGGTTGCGGGAATGTAG
mRNA sequenceShow/hide mRNA sequence
AACAGAGAAAACACAAAGTCTCTTACATTTTCTTTTCTATGAAAATACAAGGAAAAACAATCCTCTCATTTGTATTTATCCAAATACCTTCTCCCTTCAGGATTTGGATC
TCGTGATAACGATCTGTTCTTTTCCACGTGTGCGCTCCAGATCTTTTTTTAGTACAGGTTGGCTATCCGCGTCCACTCGGACTGCCCAATCACAGCTCGTTTTTCCCTCC
ACGTCCAGATTCTTCTTCCCCTATAACTGCCTCAGAGCAGTCCTCCGTCTCGAGCATATTCGCTGAGCGGTTGTTTCTCGTTCGGTAGTTTGTGAAAATTTTAATCATGT
CATCAACCGGAGAGGCTGAAGTGAAAGTTCCGGCGGAGGATGTTCCTCCTGTGGAGGTTCCGGCTGCAGAGGAGCCGAAGGAGGCCGAGAAGCCGCCGGTGAAGGAGAAG
AAACCTAGGGCTCCGAGGGAGAAGAAGCCAAGGCAGTCTAAAGTTGCTTCACATCCACCGTATTTTCAGATGATCAATGAAGCAATCTCGTCGCTCAACGAGAAGAATGG
ATCGAGTCCGTACGCTATAGCGAAATACATGGAGGAGAAACACAAGGCGGTTCTACCAGCGAATTTCAGGAAAATCTTGGCTCTGCAATTGAAGAATTCCACCGCTAAAG
GAAAACTAACGAAGATCAAGGCATCGTATAAGCTGTCCGAAACGGGAATGAAGAAAGAGAAGAACGCAACGAAGGTCGCAAAAGCGAACGCAGAGAAGAAAACTAAACAG
GCAAGAACGACAAGAAGTACTGGAAGGAAGAGGAAGGCGGTGAAGAAGGACGAGGTGGCGAGTAAAGCGGTGAAGCCGGTGAAGAAGGTTGTTGCAAAGAAACCGAAAAG
ATCAACTCCGGCGAAGCCAAAACAGCCGAAATCAATCAGGGCCCCTGCTGCGAAGAGGGCTAAGAAAGCGGTTGCGGGAATGTAGAGTAGAGTTCAAACAAGTTGTCTTT
GAATCAATCCTCTTTTGTGAATATCTTGCTTATGAATTACGATCATGTAGTGTGTAAATTCTGGGATCTTGTGATCTTTTAGTCTTTGCTTTAATAACTGCAGTGGAAAT
AAATCCTTTCTTGTTCAGAATTTCAATGTTCTTGATATGATACAATGTTCATATTCATCCTTTCAATTCGAGACACATGGCTCTGGTTTGCTGTTTGAATTAGAAAAGAG
AATCAATAGGAACTCCTGGATTTACTTCAA
Protein sequenceShow/hide protein sequence
MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTA
KGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAPAAKRAKKAVAGM