; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G006240 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G006240
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:5034357..5035014
RNA-Seq ExpressionLsi01G006240
SyntenyLsi01G006240
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603927.1 hypothetical protein SDJN03_04536, partial [Cucurbita argyrosperma subsp. sororia]8.9e-1661.5Show/hide
Query:  MERERGCGVLLVLGIVLSTYLVE---------------------------VGVTGRNVTVTAGK-----------GGGSSSREGGGGGGGGGVGESGGGG
        MER RGCGVLLV+GIVLS YLVE                           VGV+GRN TV  G+           GGG     GGGGGGGG  GE  G G
Subjt:  MERERGCGVLLVLGIVLSTYLVE---------------------------VGVTGRNVTVTAGK-----------GGGSSSREGGGGGGGGGVGESGGGG

Query:  VRKKDTKHNKKHGKSGNGGGAGGGGGNGGGGGGGGGKGGGGGGGGGGNGKGYGWGEGSGGGGGGGGGGGGGGGGGGGGGGGGSGGGGGGGSGGGWGFGGG
        VRKKDTKH+KKHGK GNGG        GGGGGGGGGKG G GGGGGG G       G GGGGGGGGGGGGGGGGGGGGG GG GGGGGGGSGGGWGFGGG
Subjt:  VRKKDTKHNKKHGKSGNGGGAGGGGGNGGGGGGGGGKGGGGGGGGGGNGKGYGWGEGSGGGGGGGGGGGGGGGGGGGGGGGGSGGGGGGGSGGGWGFGGG

Query:  GSRGFCWIWGCGGGGHGKALGRRGGP
        GSR FCWIWGCGGG   KA  R+ GP
Subjt:  GSRGFCWIWGCGGGGHGKALGRRGGP
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGAAAGGGGTTGTGGGGTTCTTTTGGTTCTTGGAATTGTGTTGAGCACTTACTTGGTTGAGGTTGGTGTAACCGGAAGAAATGTGACTGTTACCGCCGGCAA
GGGTGGAGGAAGTTCATCCCGTGAAGGCGGCGGCGGCGGTGGTGGTGGAGGAGTAGGGGAAAGTGGTGGTGGTGGGGTAAGAAAGAAAGATACAAAACATAATAAAAAGC
ATGGAAAAAGCGGGAATGGCGGCGGGGCAGGTGGCGGAGGCGGCAATGGCGGGGGCGGAGGCGGTGGAGGTGGAAAGGGCGGTGGTGGAGGTGGAGGTGGAGGGGGAAAT
GGAAAAGGCTATGGATGGGGAGAGGGCAGTGGAGGTGGTGGCGGCGGTGGAGGAGGAGGAGGTGGAGGTGGAGGTGGAGGTGGTGGCGGTGGAGGAGGAGGAAGTGGTGG
AGGTGGAGGTGGAGGAAGTGGTGGAGGATGGGGTTTTGGCGGAGGAGGGAGTAGGGGTTTTTGTTGGATTTGGGGATGCGGCGGCGGCGGTCATGGAAAAGCATTGGGTA
GAAGAGGAGGTCCCTCAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAGAAAGGGGTTGTGGGGTTCTTTTGGTTCTTGGAATTGTGTTGAGCACTTACTTGGTTGAGGTTGGTGTAACCGGAAGAAATGTGACTGTTACCGCCGGCAA
GGGTGGAGGAAGTTCATCCCGTGAAGGCGGCGGCGGCGGTGGTGGTGGAGGAGTAGGGGAAAGTGGTGGTGGTGGGGTAAGAAAGAAAGATACAAAACATAATAAAAAGC
ATGGAAAAAGCGGGAATGGCGGCGGGGCAGGTGGCGGAGGCGGCAATGGCGGGGGCGGAGGCGGTGGAGGTGGAAAGGGCGGTGGTGGAGGTGGAGGTGGAGGGGGAAAT
GGAAAAGGCTATGGATGGGGAGAGGGCAGTGGAGGTGGTGGCGGCGGTGGAGGAGGAGGAGGTGGAGGTGGAGGTGGAGGTGGTGGCGGTGGAGGAGGAGGAAGTGGTGG
AGGTGGAGGTGGAGGAAGTGGTGGAGGATGGGGTTTTGGCGGAGGAGGGAGTAGGGGTTTTTGTTGGATTTGGGGATGCGGCGGCGGCGGTCATGGAAAAGCATTGGGTA
GAAGAGGAGGTCCCTCAAATTAA
Protein sequenceShow/hide protein sequence
MERERGCGVLLVLGIVLSTYLVEVGVTGRNVTVTAGKGGGSSSREGGGGGGGGGVGESGGGGVRKKDTKHNKKHGKSGNGGGAGGGGGNGGGGGGGGGKGGGGGGGGGGN
GKGYGWGEGSGGGGGGGGGGGGGGGGGGGGGGGGSGGGGGGGSGGGWGFGGGGSRGFCWIWGCGGGGHGKALGRRGGPSN