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Lsi01G006350 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G006350
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:5115917..5117739
RNA-Seq ExpressionLsi01G006350
SyntenyLsi01G006350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5812320.1 hypothetical protein HanXRQr2_Chr04g0191261 [Helianthus annuus]1.1e-0942.11Show/hide
Query:  PPSSSKTTNRLSFGFNQARGTWYLKKKYKTHSSALMSSPGVKNLPSLCWLATALLTLGRSKGSSIIAFITVTSSICCPVSSNTQSINPYLTLPHSSHVYS
        PP SSKTT +   GFNQ RGT                      +PSL   +T  LTLG SK +SI+A  T T  + CP+SS   +I PYLTL H+ H+ S
Subjt:  PPSSSKTTNRLSFGFNQARGTWYLKKKYKTHSSALMSSPGVKNLPSLCWLATALLTLGRSKGSSIIAFITVTSSICCPVSSNTQSINPYLTLPHSSHVYS

Query:  QWLISFRCIKVTLQ
        Q L +F CI+++L+
Subjt:  QWLISFRCIKVTLQ
TrEMBL top hitse value%identityAlignment
A0A7C9F020 Uncharacterized protein1.6e-0650Show/hide
Query:  LPSLCWLATALLTLGRSKGSSIIAFITVTSSICCPVSSNTQSINPYLTLPHSSHVYSQWLISFRCIKVTL
        +PSL   A   LTL  ++ S I+A +  T S CCP+S+NT  I+P LTL H+  V S+WL+SFR IKV+L
Subjt:  LPSLCWLATALLTLGRSKGSSIIAFITVTSSICCPVSSNTQSINPYLTLPHSSHVYSQWLISFRCIKVTL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGCAGCTAAATCTCCTCATTTCAACCAACCCAATCAACCCCTCCAGTTGGGTTCTGCGGCAGCAGTCACCGGAGCACATACAACTTCAACCGATAGTCGCTTCAA
CACATTTGGACATGGATCTTGCCCAAAGTTAGTATTGGATATGCTTTCGATGTGCCAATTCTTAAGAGTTGGATGGTATTCCGAGACATCGGCACAGACACTAGTCACTG
ATCTCTTCACCAAGCTGATGCTTGTGGGATTCCCTCCGAGTTCCTCAAAGACTACTAACAGATTGTCTTTTGGCTTCAACCAAGCACGAGGCACATGGTACCTGAAAAAG
AAATATAAAACTCATTCTTCAGCATTGATGAGCTCCCCTGGTGTGAAGAACTTACCATCTTTGTGTTGGCTGGCCACAGCCTTGCTGACACTTGGGAGGTCTAAAGGTTC
CAGCATAATTGCATTTATCACAGTTACCAGTAGCATATGCTGTCCAGTATCTTCCAATACTCAGTCCATTAATCCATATTTGACCCTTCCCCATTCCTCGCATGTCTATA
GCCAATGGCTCATCTCCTTCAGGTGCATCAAAGTTACTCTGCAAGTAAAAGATAAGGTTCATACTTTTAAGGGTCGTCTCATTTTTCATTGTAAAGTCAAGTTGAATTTG
GGGTCAATAAGTACCTTGTGCCAAGTCAGTGGTTGTGGTGCTTGTGCGGCCAATGATCCTTCCATCCATTCGACTGAAGATATACCGTTTGGAGATACGAGATTCATGGC
TTCTCCTTTCAGCCCGACCTATTTCAGAGGAGTTAGGAATGAGGAAAGCTTTATCGGAGATGAATTCATAACATTCGAGAAAATTGGAGTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGCAGCTAAATCTCCTCATTTCAACCAACCCAATCAACCCCTCCAGTTGGGTTCTGCGGCAGCAGTCACCGGAGCACATACAACTTCAACCGATAGTCGCTTCAA
CACATTTGGACATGGATCTTGCCCAAAGTTAGTATTGGATATGCTTTCGATGTGCCAATTCTTAAGAGTTGGATGGTATTCCGAGACATCGGCACAGACACTAGTCACTG
ATCTCTTCACCAAGCTGATGCTTGTGGGATTCCCTCCGAGTTCCTCAAAGACTACTAACAGATTGTCTTTTGGCTTCAACCAAGCACGAGGCACATGGTACCTGAAAAAG
AAATATAAAACTCATTCTTCAGCATTGATGAGCTCCCCTGGTGTGAAGAACTTACCATCTTTGTGTTGGCTGGCCACAGCCTTGCTGACACTTGGGAGGTCTAAAGGTTC
CAGCATAATTGCATTTATCACAGTTACCAGTAGCATATGCTGTCCAGTATCTTCCAATACTCAGTCCATTAATCCATATTTGACCCTTCCCCATTCCTCGCATGTCTATA
GCCAATGGCTCATCTCCTTCAGGTGCATCAAAGTTACTCTGCAAGTAAAAGATAAGGTTCATACTTTTAAGGGTCGTCTCATTTTTCATTGTAAAGTCAAGTTGAATTTG
GGGTCAATAAGTACCTTGTGCCAAGTCAGTGGTTGTGGTGCTTGTGCGGCCAATGATCCTTCCATCCATTCGACTGAAGATATACCGTTTGGAGATACGAGATTCATGGC
TTCTCCTTTCAGCCCGACCTATTTCAGAGGAGTTAGGAATGAGGAAAGCTTTATCGGAGATGAATTCATAACATTCGAGAAAATTGGAGTTGAATGA
Protein sequenceShow/hide protein sequence
MYAAKSPHFNQPNQPLQLGSAAAVTGAHTTSTDSRFNTFGHGSCPKLVLDMLSMCQFLRVGWYSETSAQTLVTDLFTKLMLVGFPPSSSKTTNRLSFGFNQARGTWYLKK
KYKTHSSALMSSPGVKNLPSLCWLATALLTLGRSKGSSIIAFITVTSSICCPVSSNTQSINPYLTLPHSSHVYSQWLISFRCIKVTLQVKDKVHTFKGRLIFHCKVKLNL
GSISTLCQVSGCGACAANDPSIHSTEDIPFGDTRFMASPFSPTYFRGVRNEESFIGDEFITFEKIGVE