; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G006790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G006790
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLate embryogenesis abundant protein
Genome locationchr01:5473793..5474675
RNA-Seq ExpressionLsi01G006790
SyntenyLsi01G006790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441122.1 PREDICTED: uncharacterized protein LOC103485350 [Cucumis melo]2.6e-4267.72Show/hide
Query:  MINAIRFGRTPPPIVLTSPLPPKLRR-ICSPELRPRQAIGFVTAPEQNPKD--MDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYAT
        MINAIRFGRTPPPIVLTSPLPP+LRR ICS ELR RQA GF TAP+QNPKD  MD+SQNKT+ET                       DIMCDSFGEGYAT
Subjt:  MINAIRFGRTPPPIVLTSPLPPKLRR-ICSPELRPRQAIGFVTAPEQNPKD--MDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYAT

Query:  RSEEEGFGGTYGRDQSIDDEAE--NKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN
        RSEEEGFGGTYG +   DD+ E  NKK V   N+HEYD+SQGSEVKE+EKSRHQ HAN
Subjt:  RSEEEGFGGTYGRDQSIDDEAE--NKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN

XP_011658492.1 uncharacterized protein LOC101219972 [Cucumis sativus]7.3e-4571.34Show/hide
Query:  MINAIRFGRTPPPIVLTSPLPPKLRRICSPELRPRQAIGFVTAPEQNPK--DMDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYATR
        MINAIRFGRTPPPIVLTSPLPPKLRRI SPEL  RQAI F TAP++NPK  +MDDSQNKT+ET                       DIMCDSFGEGYATR
Subjt:  MINAIRFGRTPPPIVLTSPLPPKLRRICSPELRPRQAIGFVTAPEQNPK--DMDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYATR

Query:  SEEEGFGGTY-GRDQSI-DDEAENKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN
        SEEEGFGGTY G+ QSI DDE  NKKPV   NQHEYDKSQGSEVKE+EKSRHQ HAN
Subjt:  SEEEGFGGTY-GRDQSI-DDEAENKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN

XP_023543425.1 uncharacterized protein LOC111803315 [Cucurbita pepo subsp. pepo]1.1e-3255.56Show/hide
Query:  MINAIRFGRTPPPIVLTSPLPPKLRRICSPELRPRQAIGFVTAPEQNPKDMDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYATRSE
        M+NAIRF R+PPPIVLT PLPP+LRRI  PELR RQ I F TAP+QNP++MDDS+N  ++T                       D+M DSFG  YA+RSE
Subjt:  MINAIRFGRTPPPIVLTSPLPPKLRRICSPELRPRQAIGFVTAPEQNPKDMDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYATRSE

Query:  EEGFGGTYGRDQSIDDEAENKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN
        EEGFGG Y   +S D+ AEN+K      + EYDKSQGSEVKE+EK+RHQ H+N
Subjt:  EEGFGGTYGRDQSIDDEAENKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN

XP_023543426.1 uncharacterized protein LOC111803316 [Cucurbita pepo subsp. pepo]8.4e-3356.86Show/hide
Query:  MINAIRFGRTPPPIVLTSPLPPKLRRICSPELRPRQAIGFVTAPEQNPKDMDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYATRSE
        MINAIRFGR+PPPIVLT PLPP+LRRI +PELR RQ IGF TAP+QNP++MDDS+N  ++T                       DIM DSFG  YA RSE
Subjt:  MINAIRFGRTPPPIVLTSPLPPKLRRICSPELRPRQAIGFVTAPEQNPKDMDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYATRSE

Query:  EEGFGGTYGRDQSIDDEAENKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN
         EGFGG Y   +S ++ AEN+K      + EYDKSQGSEVKE+EK+RHQ H+N
Subjt:  EEGFGGTYGRDQSIDDEAENKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN

XP_038883658.1 uncharacterized protein LOC120074572 [Benincasa hispida]1.1e-4870.59Show/hide
Query:  MINAIRFGRTPPPIVLTSPLPPKLRRICSPELRPRQAIGFVTAPEQNPKDMDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYATRSE
        MINAIRFGRTPPPIVLTSPLPP+LRRICSPELR RQAIG  TAP+QN  DMDDSQNK +ET                       DIMCDSFGE YATRSE
Subjt:  MINAIRFGRTPPPIVLTSPLPPKLRRICSPELRPRQAIGFVTAPEQNPKDMDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYATRSE

Query:  EEGFGGTYGRDQSIDDEAENKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN
        EEGFGGTYGR+Q  DDE +NKK  + GNQHEYDKSQG EVKE+EKSRHQ HAN
Subjt:  EEGFGGTYGRDQSIDDEAENKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN

TrEMBL top hitse value%identityAlignment
A0A0A0KGG3 Uncharacterized protein3.6e-4571.34Show/hide
Query:  MINAIRFGRTPPPIVLTSPLPPKLRRICSPELRPRQAIGFVTAPEQNPK--DMDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYATR
        MINAIRFGRTPPPIVLTSPLPPKLRRI SPEL  RQAI F TAP++NPK  +MDDSQNKT+ET                       DIMCDSFGEGYATR
Subjt:  MINAIRFGRTPPPIVLTSPLPPKLRRICSPELRPRQAIGFVTAPEQNPK--DMDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYATR

Query:  SEEEGFGGTY-GRDQSI-DDEAENKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN
        SEEEGFGGTY G+ QSI DDE  NKKPV   NQHEYDKSQGSEVKE+EKSRHQ HAN
Subjt:  SEEEGFGGTY-GRDQSI-DDEAENKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN

A0A1S3B3C5 uncharacterized protein LOC1034853501.3e-4267.72Show/hide
Query:  MINAIRFGRTPPPIVLTSPLPPKLRR-ICSPELRPRQAIGFVTAPEQNPKD--MDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYAT
        MINAIRFGRTPPPIVLTSPLPP+LRR ICS ELR RQA GF TAP+QNPKD  MD+SQNKT+ET                       DIMCDSFGEGYAT
Subjt:  MINAIRFGRTPPPIVLTSPLPPKLRR-ICSPELRPRQAIGFVTAPEQNPKD--MDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYAT

Query:  RSEEEGFGGTYGRDQSIDDEAE--NKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN
        RSEEEGFGGTYG +   DD+ E  NKK V   N+HEYD+SQGSEVKE+EKSRHQ HAN
Subjt:  RSEEEGFGGTYGRDQSIDDEAE--NKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN

A0A5D3CN97 Late embryogenesis abundant protein1.3e-4267.72Show/hide
Query:  MINAIRFGRTPPPIVLTSPLPPKLRR-ICSPELRPRQAIGFVTAPEQNPKD--MDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYAT
        MINAIRFGRTPPPIVLTSPLPP+LRR ICS ELR RQA GF TAP+QNPKD  MD+SQNKT+ET                       DIMCDSFGEGYAT
Subjt:  MINAIRFGRTPPPIVLTSPLPPKLRR-ICSPELRPRQAIGFVTAPEQNPKD--MDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYAT

Query:  RSEEEGFGGTYGRDQSIDDEAE--NKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN
        RSEEEGFGGTYG +   DD+ E  NKK V   N+HEYD+SQGSEVKE+EKSRHQ HAN
Subjt:  RSEEEGFGGTYGRDQSIDDEAE--NKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN

A0A6J1BUB9 uncharacterized protein LOC1110057701.2e-3255.84Show/hide
Query:  MINAIRFGRTPPPIVLTSPLPPKLRRICSPELRPRQAIGFVTAP-EQNPKDMDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYATRS
        M +AIR GR+PPP VLT+PLPP+LRR  SPELR RQ IG  TAP +Q+  +MDDS+N  ++T                       DIM  SFGEGYATRS
Subjt:  MINAIRFGRTPPPIVLTSPLPPKLRRICSPELRPRQAIGFVTAP-EQNPKDMDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYATRS

Query:  EEEGFGGTYGRDQSIDDEAENKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN
        +EEGFGG YG ++S DD+ E K  V   N  EYDKSQGSEVKE+E SRHQ HAN
Subjt:  EEEGFGGTYGRDQSIDDEAENKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN

A0A6J1IN44 uncharacterized protein LOC1114785211.0e-3154.9Show/hide
Query:  MINAIRFGRTPPPIVLTSPLPPKLRRICSPELRPRQAIGFVTAPEQNPKDMDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYATRSE
        MINAIRFGR+PPPIVLT PLPP+LRR    ELR RQ IGF TAP+QNP++MDDS++  ++T                       D+M DSFG+ YA+RSE
Subjt:  MINAIRFGRTPPPIVLTSPLPPKLRRICSPELRPRQAIGFVTAPEQNPKDMDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYATRSE

Query:  EEGFGGTYGRDQSIDDEAENKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN
        EEGFGG Y   +S ++ AEN+K      + EYDKSQGSEVKE+EK+RHQ H+N
Subjt:  EEGFGGTYGRDQSIDDEAENKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G66780.1 unknown protein5.7e-1152.17Show/hide
Query:  DIMCDSFGEGYATRSEEEGFGGTYGRDQSIDDEAENKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN
        D+M  S+GEGYATRS+EEGFGG YG +Q++  E E  +     N  +YDK+QGSE KE+EK+R+Q  ++
Subjt:  DIMCDSFGEGYATRSEEEGFGGTYGRDQSIDDEAENKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAACGCAATCAGATTCGGCCGTACTCCACCTCCGATTGTGCTCACATCCCCTCTTCCGCCGAAGCTCCGCCGTATTTGCTCGCCTGAACTCCGACCCCGTCAAGC
GATTGGTTTTGTCACCGCACCTGAGCAGAACCCAAAGGACATGGATGACTCTCAGAACAAAACCAGGGAGACTCGGTTAGTAGGACACCATTTCCTAATTATTTTGGTTC
AGATAATGATTTTCTTTTTTTTGAAATTTATGGATATAATGTGTGATTCCTTCGGGGAAGGGTACGCGACCCGAAGCGAGGAAGAAGGATTTGGAGGAACTTATGGAAGG
GATCAGTCGATCGACGACGAAGCCGAGAATAAAAAACCGGTTACCGACGGGAATCAACATGAATATGATAAAAGCCAAGGGAGTGAAGTGAAGGAGAGGGAGAAGTCACG
CCATCAGCCTCATGCAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCAACGCAATCAGATTCGGCCGTACTCCACCTCCGATTGTGCTCACATCCCCTCTTCCGCCGAAGCTCCGCCGTATTTGCTCGCCTGAACTCCGACCCCGTCAAGC
GATTGGTTTTGTCACCGCACCTGAGCAGAACCCAAAGGACATGGATGACTCTCAGAACAAAACCAGGGAGACTCGGTTAGTAGGACACCATTTCCTAATTATTTTGGTTC
AGATAATGATTTTCTTTTTTTTGAAATTTATGGATATAATGTGTGATTCCTTCGGGGAAGGGTACGCGACCCGAAGCGAGGAAGAAGGATTTGGAGGAACTTATGGAAGG
GATCAGTCGATCGACGACGAAGCCGAGAATAAAAAACCGGTTACCGACGGGAATCAACATGAATATGATAAAAGCCAAGGGAGTGAAGTGAAGGAGAGGGAGAAGTCACG
CCATCAGCCTCATGCAAATTGAACTGCTAGAATGTTAATTTTTCTCTTTGTCTAATATTGTTGTTTTTTAAAATCGACAATTACGAGGAGGAAATGTTTGTAGGATATGT
AGCTCTATGTCCAATGTGTATGGTTTCTCATGGTGGTTCTTCCATGAGAGTTTAAGGGTTGTGATAGTCACTTCTCTTCGCATTGTATAGAGA
Protein sequenceShow/hide protein sequence
MINAIRFGRTPPPIVLTSPLPPKLRRICSPELRPRQAIGFVTAPEQNPKDMDDSQNKTRETRLVGHHFLIILVQIMIFFFLKFMDIMCDSFGEGYATRSEEEGFGGTYGR
DQSIDDEAENKKPVTDGNQHEYDKSQGSEVKEREKSRHQPHAN