; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G006870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G006870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function (DUF1195)
Genome locationchr01:5504590..5507937
RNA-Seq ExpressionLsi01G006870
SyntenyLsi01G006870
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010608 - Protein of unknown function DUF1195


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008440698.1 PREDICTED: uncharacterized protein LOC103485038 [Cucumis melo]1.2e-8897.16Show/hide
Query:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI
        MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI
Subjt:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI

Query:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL
        RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHS+VLDTPSDQST A EFTKRQKIADKSR++ATKTGSKL
Subjt:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL

XP_011658007.1 uncharacterized protein LOC101216891 [Cucumis sativus]4.0e-8796.02Show/hide
Query:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI
        MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDF+IHDDLDVLEMEEREKIVKHMWDVYTNNRRI
Subjt:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI

Query:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL
        RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHS+VLDTPSDQST A EFTKRQKIADKSR++ATKT SKL
Subjt:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL

XP_022978567.1 uncharacterized protein LOC111478506 [Cucurbita maxima]7.8e-8391.48Show/hide
Query:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI
        MKDDDVLPTTIASAGKK+SSVSS+FGKGRYKFWAL AILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFN+ +DLDVLEMEEREKIVKHMWDVYTNNRRI
Subjt:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI

Query:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL
        RLPRFWQEAFEAAYEDLTSE+PGDREAAISEIARMS+HSIVLDTPS+QST+A EFTK QKIADKSR +A KTGSKL
Subjt:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL

XP_023545158.1 uncharacterized protein LOC111804541 [Cucurbita pepo subsp. pepo]2.3e-8291.48Show/hide
Query:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI
        MKDDDVLPTTIASAGKKESSVSS+FGKGRYKFWAL AILLLAFWSMFTGTVSLRWS GNLNGLSDDIDFN+ +DLDVLEMEEREKIVKHMWDVYTNNRRI
Subjt:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI

Query:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL
        RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMS+HSIVLDTPS+QST+A EFTK  KIADKSR +A KTGSKL
Subjt:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL

XP_038883913.1 uncharacterized protein LOC120074752 [Benincasa hispida]3.3e-8998.3Show/hide
Query:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI
        MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI
Subjt:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI

Query:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL
        RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPS+QSTTA EFTKRQKIADKSRE+ATKTGSKL
Subjt:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL

TrEMBL top hitse value%identityAlignment
A0A0A0KGF8 Uncharacterized protein1.9e-8796.02Show/hide
Query:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI
        MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDF+IHDDLDVLEMEEREKIVKHMWDVYTNNRRI
Subjt:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI

Query:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL
        RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHS+VLDTPSDQST A EFTKRQKIADKSR++ATKT SKL
Subjt:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL

A0A1S3B2C0 uncharacterized protein LOC1034850386.0e-8997.16Show/hide
Query:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI
        MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI
Subjt:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI

Query:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL
        RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHS+VLDTPSDQST A EFTKRQKIADKSR++ATKTGSKL
Subjt:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL

A0A6J1BS47 uncharacterized protein LOC1110052572.5e-8290.91Show/hide
Query:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI
        MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSD +DFNI+DDLDVLEMEEREK+VKHMWDVYTNNRRI
Subjt:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI

Query:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL
        RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIV+D  S+QST+A  F K QKIADK+RE+AT TGSKL
Subjt:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL

A0A6J1GEZ2 uncharacterized protein LOC1114533257.1e-8291.53Show/hide
Query:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI
        MKDDDVLPTTIASAGKKESSVSS+FGKGRYKFWAL AILLLAFWSMFTGTVSLRWS GNLNGLSDDIDFN+ +DLDVLEMEEREKIVKHMWDVYTNNRRI
Subjt:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI

Query:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKI-ADKSRESATKTGSKL
        RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMS+HSIVLDTPS+QST+A EFTK QKI ADKSR +A KTGSKL
Subjt:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKI-ADKSRESATKTGSKL

A0A6J1ILF2 uncharacterized protein LOC1114785063.8e-8391.48Show/hide
Query:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI
        MKDDDVLPTTIASAGKK+SSVSS+FGKGRYKFWAL AILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFN+ +DLDVLEMEEREKIVKHMWDVYTNNRRI
Subjt:  MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRI

Query:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL
        RLPRFWQEAFEAAYEDLTSE+PGDREAAISEIARMS+HSIVLDTPS+QST+A EFTK QKIADKSR +A KTGSKL
Subjt:  RLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19380.1 Protein of unknown function (DUF1195)7.9e-2550.41Show/hide
Query:  YKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRIRLPRFWQEAFEAAYEDLTSEVPGDREAAI
        YK W L A+LLLAF SM TG+VSL+   G  +       F+  DDLDVLE+EEREK+V+ MWDVY  +  +++PRFW+EAFEAAYE L S+    R AA+
Subjt:  YKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRIRLPRFWQEAFEAAYEDLTSEVPGDREAAI

Query:  SEIARMSVHSIVLDTPSDQSTTA
        S+IA++S+   V      +ST+A
Subjt:  SEIARMSVHSIVLDTPSDQSTTA

AT4G36660.1 Protein of unknown function (DUF1195)6.6e-5666.27Show/hide
Query:  MKDDDVLPTTIASA---------GKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMW
        MK+DD LPTT  +           KKESS S LFG+GRYKFWA AAILLLAFWSMFTGTV+LR S GNLN LS+D+    +D+LDVLEMEEREK+VKHMW
Subjt:  MKDDDVLPTTIASA---------GKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMW

Query:  DVYTNNRRIRLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQK
        DVYTN+RRI+LPRFWQEAF AAYE+LTS+VPG REAAI EIA+MS  SI LD P  +S +A +  +  K
Subjt:  DVYTNNRRIRLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQK

AT5G65650.1 Protein of unknown function (DUF1195)1.1e-6170.35Show/hide
Query:  MKDDDVLPTTIAS------AGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVY
        MKD D LP + +S       GKKE+  S+LF KGRYKFWALAAILLLAFWSM TGTV+LRWSAGN+N  +DD+ F IH+DLDVLEMEEREK+VKHMWDVY
Subjt:  MKDDDVLPTTIAS------AGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVY

Query:  TNNRRIRLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSR
         N RRIRLPRFWQEAFEAAYE+LTS+VP   EAAISEIARMS+ SIV+D P   ST   E TK  K+ADK R
Subjt:  TNNRRIRLPRFWQEAFEAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGACGACGACGTCCTTCCAACGACGATAGCGAGTGCCGGGAAGAAAGAGAGCTCGGTTTCGAGTTTATTCGGCAAAGGACGCTACAAGTTCTGGGCATTGGCTGC
CATTTTGTTGCTCGCATTTTGGTCTATGTTCACCGGCACCGTCTCTCTTCGATGGTCCGCCGGTAATCTCAACGGCCTATCTGATGATATCGATTTTAACATCCATGACG
ATCTCGATGTGCTTGAGATGGAGGAAAGGGAGAAGATAGTGAAGCACATGTGGGACGTTTATACAAATAATCGCCGGATCAGGTTACCGCGTTTCTGGCAAGAGGCATTC
GAGGCTGCGTACGAGGACCTGACCAGTGAAGTGCCTGGTGATAGAGAGGCTGCAATCTCTGAGATCGCCCGGATGTCCGTGCACTCCATTGTTCTTGATACGCCTTCGGA
CCAATCCACGACTGCACTAGAGTTCACAAAGAGGCAGAAAATAGCAGATAAAAGCAGGGAGTCAGCTACCAAAACTGGGAGTAAGCTGTGA
mRNA sequenceShow/hide mRNA sequence
TGATAGATCAAGAAGAAGCCTCTCTTTTCTCTCTCTCTCTCTTCAGTGAGAGAAGAAACTCTCTTCTCCGTCCAAATCTGGTTCTACCTTCGATTCAGTGGGAAAAAAGC
GAGGCCATAATTCCTCATTGTTTATACAATCGATTTCTAGGGGATTGATTCGAGTATTTTGATTTTTATTTTTTCTTCTTATTGTCGTTGATCGATATGAAGGACGACGA
CGTCCTTCCAACGACGATAGCGAGTGCCGGGAAGAAAGAGAGCTCGGTTTCGAGTTTATTCGGCAAAGGACGCTACAAGTTCTGGGCATTGGCTGCCATTTTGTTGCTCG
CATTTTGGTCTATGTTCACCGGCACCGTCTCTCTTCGATGGTCCGCCGGTAATCTCAACGGCCTATCTGATGATATCGATTTTAACATCCATGACGATCTCGATGTGCTT
GAGATGGAGGAAAGGGAGAAGATAGTGAAGCACATGTGGGACGTTTATACAAATAATCGCCGGATCAGGTTACCGCGTTTCTGGCAAGAGGCATTCGAGGCTGCGTACGA
GGACCTGACCAGTGAAGTGCCTGGTGATAGAGAGGCTGCAATCTCTGAGATCGCCCGGATGTCCGTGCACTCCATTGTTCTTGATACGCCTTCGGACCAATCCACGACTG
CACTAGAGTTCACAAAGAGGCAGAAAATAGCAGATAAAAGCAGGGAGTCAGCTACCAAAACTGGGAGTAAGCTGTGACATGGATGATGTTAACGATGATCCAAGTATTGC
AAGATGGGTCAAACAGCCTTTTTGCCTAGAATGTTAGAATGATATTTGTTAATGTTATTTATAAAGGTGAAAGATAAATTTTTGGAAGGTCTCACATTCGTCAATCTTTA
AAACAGGTAGGAAGAGGATCATAAATTGTACTTCCATCCAACCCATGGTTTTGCATACCTTTTTTACAGTTTTATTTGCATTTCTGTGATTATTACTGTGGATAATTTCA
ATTACCAATGCGGTGGTCTGAGTGTCTATGTGAATTTCTCATGTGATGGAATTATGAACCTAATGGAACTGCGTTTAGGAA
Protein sequenceShow/hide protein sequence
MKDDDVLPTTIASAGKKESSVSSLFGKGRYKFWALAAILLLAFWSMFTGTVSLRWSAGNLNGLSDDIDFNIHDDLDVLEMEEREKIVKHMWDVYTNNRRIRLPRFWQEAF
EAAYEDLTSEVPGDREAAISEIARMSVHSIVLDTPSDQSTTALEFTKRQKIADKSRESATKTGSKL