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Lsi01G007300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G007300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:5769726..5769956
RNA-Seq ExpressionLsi01G007300
SyntenyLsi01G007300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604012.1 hypothetical protein SDJN03_04621, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2380.72Show/hide
Query:  MADIAILVAEEYERRMKNP---SEKQELQDLASGVSI----TAIRMKKMMEMAKQNAEMSEFKWVFEPKSQIGRAASTGFFSA
        MADIAILVAEEYERRMKNP    E Q+L+DL+SGVSI    +AIRMKKMME+A QNAEM+EFKWVFEPKSQIGRAASTGFFSA
Subjt:  MADIAILVAEEYERRMKNP---SEKQELQDLASGVSI----TAIRMKKMMEMAKQNAEMSEFKWVFEPKSQIGRAASTGFFSA

XP_011657992.1 uncharacterized protein LOC105435930 [Cucumis sativus]5.3e-2074.16Show/hide
Query:  MADIAILVAEEYERRMKNPSE-----KQELQDL-ASGVSI----TAIRMKKMMEMAKQ---NAEMSEFKWVFEPKSQIGRAASTGFFSA
        MADIAILVAEEYERR KNP       +QELQ+L +SGVSI    T+IRMKKMMEMAK+   +AEMSEF WVFEPKSQIGRAASTGFFSA
Subjt:  MADIAILVAEEYERRMKNPSE-----KQELQDL-ASGVSI----TAIRMKKMMEMAKQ---NAEMSEFKWVFEPKSQIGRAASTGFFSA

XP_022962826.1 uncharacterized protein LOC111463202 [Cucurbita moschata]2.4e-2074.39Show/hide
Query:  MADIAILVAEEYERRMKNPSEKQ----ELQDLASGVSI--TAIRMKKMMEMAKQNAEMSEFKWVFEPKSQIGRAASTGFFSA
        MADIAILVAEEYERRMKNP ++Q    E+QDL SGVSI  TA R+KKMME+  + A+ +EFKWVFEPKSQIGRAASTGFFSA
Subjt:  MADIAILVAEEYERRMKNPSEKQ----ELQDLASGVSI--TAIRMKKMMEMAKQNAEMSEFKWVFEPKSQIGRAASTGFFSA

XP_023003555.1 uncharacterized protein LOC111497122 [Cucurbita maxima]1.8e-2074.39Show/hide
Query:  MADIAILVAEEYERRMKNPSEKQ----ELQDLASGVSI--TAIRMKKMMEMAKQNAEMSEFKWVFEPKSQIGRAASTGFFSA
        MADIAILVAEEYERRMKNP +++    E+QDL SGVSI  TA R+KKMME+  + AE +EFKWVFEPKSQIGRAASTGFFSA
Subjt:  MADIAILVAEEYERRMKNPSEKQ----ELQDLASGVSI--TAIRMKKMMEMAKQNAEMSEFKWVFEPKSQIGRAASTGFFSA

XP_038882836.1 uncharacterized protein LOC120073972 [Benincasa hispida]2.2e-2685.54Show/hide
Query:  MADIAILVAEEYERRMKNPS---EKQELQDLASGVSI----TAIRMKKMMEMAKQNAEMSEFKWVFEPKSQIGRAASTGFFSA
        MADIAILVAEEYERRMKNP+   EKQELQDLASGVSI    T+IRMKKMMEMAKQN+++SEFKWVFEPKSQIGRAASTGFFSA
Subjt:  MADIAILVAEEYERRMKNPS---EKQELQDLASGVSI----TAIRMKKMMEMAKQNAEMSEFKWVFEPKSQIGRAASTGFFSA

TrEMBL top hitse value%identityAlignment
A0A0A0KK75 Uncharacterized protein2.6e-2074.16Show/hide
Query:  MADIAILVAEEYERRMKNPSE-----KQELQDL-ASGVSI----TAIRMKKMMEMAKQ---NAEMSEFKWVFEPKSQIGRAASTGFFSA
        MADIAILVAEEYERR KNP       +QELQ+L +SGVSI    T+IRMKKMMEMAK+   +AEMSEF WVFEPKSQIGRAASTGFFSA
Subjt:  MADIAILVAEEYERRMKNPSE-----KQELQDL-ASGVSI----TAIRMKKMMEMAKQ---NAEMSEFKWVFEPKSQIGRAASTGFFSA

A0A1S4DTC5 uncharacterized protein LOC1034850032.8e-1972.73Show/hide
Query:  MADIAILVAEEYERRMKNPSE-----KQELQDLASGVSI----TAIRMKKMMEMAKQN---AEMSEFKWVFEPKSQIGRAASTGFFSA
        MADIAILVAEEYERR K+P       +QELQDL SGVSI    T+I MKKMMEMAK+N   AE+SEF  VFEPKSQIGRAASTGFFSA
Subjt:  MADIAILVAEEYERRMKNPSE-----KQELQDLASGVSI----TAIRMKKMMEMAKQN---AEMSEFKWVFEPKSQIGRAASTGFFSA

A0A5A7T3Y6 Uncharacterized protein2.8e-1972.73Show/hide
Query:  MADIAILVAEEYERRMKNPSE-----KQELQDLASGVSI----TAIRMKKMMEMAKQN---AEMSEFKWVFEPKSQIGRAASTGFFSA
        MADIAILVAEEYERR K+P       +QELQDL SGVSI    T+I MKKMMEMAK+N   AE+SEF  VFEPKSQIGRAASTGFFSA
Subjt:  MADIAILVAEEYERRMKNPSE-----KQELQDLASGVSI----TAIRMKKMMEMAKQN---AEMSEFKWVFEPKSQIGRAASTGFFSA

A0A6J1HEA8 uncharacterized protein LOC1114632021.2e-2074.39Show/hide
Query:  MADIAILVAEEYERRMKNPSEKQ----ELQDLASGVSI--TAIRMKKMMEMAKQNAEMSEFKWVFEPKSQIGRAASTGFFSA
        MADIAILVAEEYERRMKNP ++Q    E+QDL SGVSI  TA R+KKMME+  + A+ +EFKWVFEPKSQIGRAASTGFFSA
Subjt:  MADIAILVAEEYERRMKNPSEKQ----ELQDLASGVSI--TAIRMKKMMEMAKQNAEMSEFKWVFEPKSQIGRAASTGFFSA

A0A6J1KS29 uncharacterized protein LOC1114971228.8e-2174.39Show/hide
Query:  MADIAILVAEEYERRMKNPSEKQ----ELQDLASGVSI--TAIRMKKMMEMAKQNAEMSEFKWVFEPKSQIGRAASTGFFSA
        MADIAILVAEEYERRMKNP +++    E+QDL SGVSI  TA R+KKMME+  + AE +EFKWVFEPKSQIGRAASTGFFSA
Subjt:  MADIAILVAEEYERRMKNPSEKQ----ELQDLASGVSI--TAIRMKKMMEMAKQNAEMSEFKWVFEPKSQIGRAASTGFFSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G65207.1 unknown protein3.9e-0542.86Show/hide
Query:  MADIAILVAEEYERRMK--------NPSEKQELQDLASGVSITAIRMKKMMEMAKQNAEMSEFKWVFEPKSQIGRAASTGFFSA
        MADIAILVAEEYERRMK        +P E    + + + ++I   +MK  +E  K+N         FE KS+   A S GFFSA
Subjt:  MADIAILVAEEYERRMK--------NPSEKQELQDLASGVSITAIRMKKMMEMAKQNAEMSEFKWVFEPKSQIGRAASTGFFSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATATTGCAATTCTTGTAGCAGAGGAATACGAGAGGAGGATGAAGAATCCAAGTGAGAAGCAAGAGCTTCAAGATTTGGCTTCTGGGGTTTCCATTACTGCGAT
TAGGATGAAGAAGATGATGGAAATGGCAAAACAAAATGCAGAGATGTCGGAATTCAAATGGGTTTTTGAACCCAAATCTCAAATTGGGCGAGCTGCCTCCACTGGATTCT
TCTCGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATATTGCAATTCTTGTAGCAGAGGAATACGAGAGGAGGATGAAGAATCCAAGTGAGAAGCAAGAGCTTCAAGATTTGGCTTCTGGGGTTTCCATTACTGCGAT
TAGGATGAAGAAGATGATGGAAATGGCAAAACAAAATGCAGAGATGTCGGAATTCAAATGGGTTTTTGAACCCAAATCTCAAATTGGGCGAGCTGCCTCCACTGGATTCT
TCTCGGCTTGA
Protein sequenceShow/hide protein sequence
MADIAILVAEEYERRMKNPSEKQELQDLASGVSITAIRMKKMMEMAKQNAEMSEFKWVFEPKSQIGRAASTGFFSA