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Lsi01G007330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G007330
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:5784986..5785201
RNA-Seq ExpressionLsi01G007330
SyntenyLsi01G007330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036273.1 hypothetical protein E6C27_scaffold18G00720 [Cucumis melo var. makuwa]2.8e-2387.84Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRRED--SVKPPKTAHH-SGPIAGKSSKKVHPGTIFGVPATCNS
        MSS+GASCARVYVMKKKAEEKLQRMEQERSGRRED  SVKPPKTAHH  G IAGKSSKKVHPGT+FGVP T NS
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRRED--SVKPPKTAHH-SGPIAGKSSKKVHPGTIFGVPATCNS

KAF3969578.1 hypothetical protein CMV_006642 [Castanea mollissima]2.2e-0458.33Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHSGPIAGKSSKKVHPG
        MSSI  SCA VYVMKK+ +EKL+RME+ER+ R E S +  K    SG   G+ SKKVHPG
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHSGPIAGKSSKKVHPG

KAG6594855.1 hypothetical protein SDJN03_11408, partial [Cucurbita argyrosperma subsp. sororia]2.5e-1977.94Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHSGPIAGKSSKKVHPGTIFGVPAT
        MSSIGASCARVYVMKKK EEKLQRMEQE++GRRED VKP KTAHH G  AG + KKVHPGT+  VPA+
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHSGPIAGKSSKKVHPGTIFGVPAT

KAG6604014.1 hypothetical protein SDJN03_04623, partial [Cucurbita argyrosperma subsp. sororia]6.1e-1871.23Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHH--SGPIAGKSSKKVHPGTIFGVPATCNS
        MSS+GA+CARVYVM+KK EEKL+RMEQER+GR ED+VKPPK+AHH   G IAGK+ KKVHPG +F V A  NS
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHH--SGPIAGKSSKKVHPGTIFGVPATCNS

KGN48780.1 hypothetical protein Csa_002943 [Cucumis sativus]9.7e-2487.5Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHH-SGPIAGKSSKKVHPGTIFGVPATCNS
        MSS+GASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKT+HH +G IAGKSSKKVHPGT+FG+ AT NS
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHH-SGPIAGKSSKKVHPGTIFGVPATCNS

TrEMBL top hitse value%identityAlignment
A0A0A0KGB8 Uncharacterized protein4.7e-2487.5Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHH-SGPIAGKSSKKVHPGTIFGVPATCNS
        MSS+GASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKT+HH +G IAGKSSKKVHPGT+FG+ AT NS
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHH-SGPIAGKSSKKVHPGTIFGVPATCNS

A0A2N9EUS9 Uncharacterized protein1.7e-0558.33Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHSGPIAGKSSKKVHPG
        MSSIGASCA +YVM+K+ +EKL+RME+ER  + E SV+  K    SG   G+ SKKVHPG
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHSGPIAGKSSKKVHPG

A0A2P5BZF9 Uncharacterized protein3.1e-0448.57Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHSGPIAGK--SSKKVHPGTIFGVPAT
        MSSIGASCA VYVM+K+ +EK++RME+ER+ R E        +  SG  +     SKKVHPG   G  +T
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHSGPIAGK--SSKKVHPGTIFGVPAT

A0A5A7T065 Uncharacterized protein1.4e-2387.84Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRRED--SVKPPKTAHH-SGPIAGKSSKKVHPGTIFGVPATCNS
        MSS+GASCARVYVMKKKAEEKLQRMEQERSGRRED  SVKPPKTAHH  G IAGKSSKKVHPGT+FGVP T NS
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRRED--SVKPPKTAHH-SGPIAGKSSKKVHPGTIFGVPATCNS

A0A7N2M0Y4 Uncharacterized protein7.0e-0456.67Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHSGPIAGKSSKKVHPG
        MSSIG +CA VYVMKK+ +EKL+RME+ER+   E S +  K    SG   G+ SKKVHPG
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHSGPIAGKSSKKVHPG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCCATAGGAGCTAGCTGTGCTAGGGTTTATGTAATGAAAAAGAAAGCAGAGGAAAAACTACAGAGGATGGAGCAGGAGAGATCTGGCCGGAGAGAGGACTCCGT
CAAACCTCCCAAAACTGCCCATCACAGCGGCCCCATCGCCGGCAAATCCAGTAAAAAAGTCCATCCGGGTACCATATTTGGGGTTCCGGCGACCTGTAATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCCATAGGAGCTAGCTGTGCTAGGGTTTATGTAATGAAAAAGAAAGCAGAGGAAAAACTACAGAGGATGGAGCAGGAGAGATCTGGCCGGAGAGAGGACTCCGT
CAAACCTCCCAAAACTGCCCATCACAGCGGCCCCATCGCCGGCAAATCCAGTAAAAAAGTCCATCCGGGTACCATATTTGGGGTTCCGGCGACCTGTAATTCTTGA
Protein sequenceShow/hide protein sequence
MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHSGPIAGKSSKKVHPGTIFGVPATCNS