; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G008010 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G008010
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCyclin N-terminal domain-containing protein
Genome locationchr01:6319881..6321308
RNA-Seq ExpressionLsi01G008010
SyntenyLsi01G008010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594897.1 hypothetical protein SDJN03_11450, partial [Cucurbita argyrosperma subsp. sororia]4.6e-6071.98Show/hide
Query:  MDQLHNCFNPNILGLGDVSLLPPSRSLHNNAHAKVVNVDEKGLKQAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKT
        MDQL NCF P+ILGL  +SLLPP     +NAHAK++ V EKGL  AISEEEMKIRREIE EIERDLEEEIKGGIYQQALRL RLYQHR  SG I PPVK 
Subjt:  MDQLHNCFNPNILGLGDVSLLPPSRSLHNNAHAKVVNVDEKGLKQAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKT

Query:  KKDLLEVNISIKMDGGTMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGKNVRFDRNKM
        KK+LLEVNISIKM+GGT MEI++     PPP    R+RT+RSDT +R VPE+KRLDWVKSLRS  AP P VGKNV F RNKM
Subjt:  KKDLLEVNISIKMDGGTMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGKNVRFDRNKM

XP_022962744.1 uncharacterized protein LOC111463142 isoform X2 [Cucurbita moschata]9.2e-6172.53Show/hide
Query:  MDQLHNCFNPNILGLGDVSLLPPSRSLHNNAHAKVVNVDEKGLKQAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKT
        MDQL NCF P+ILGL  +SLLPP     +NAHAK++ V EKGL  AISEEEMKIRREIE EIERDLEEEIKGGIYQQALRL RLYQHR  SG I PPVKT
Subjt:  MDQLHNCFNPNILGLGDVSLLPPSRSLHNNAHAKVVNVDEKGLKQAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKT

Query:  KKDLLEVNISIKMDGGTMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGKNVRFDRNKM
        KK+LLEVNISIKM+GGT MEI++     PPP    R+RT+RSDT +R VPE+KRLDWVKSLRS  AP P VGKNV F RNKM
Subjt:  KKDLLEVNISIKMDGGTMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGKNVRFDRNKM

XP_023003824.1 uncharacterized protein LOC111497292 [Cucurbita maxima]6.0e-6073.08Show/hide
Query:  MDQLHNCFNPNILGLGDVSLLPPSRSLHNNAHAKVVNVDEKGLKQAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKT
        MDQL NCF P+ILGL  +SLLPPS S H N HAK++ V EKGL  AISEEEMKIRREIE EIERDLEEEIKGGIYQQALRL RLYQHR  SG I PP+KT
Subjt:  MDQLHNCFNPNILGLGDVSLLPPSRSLHNNAHAKVVNVDEKGLKQAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKT

Query:  KKDLLEVNISIKMDGGTMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGKNVRFDRNKM
        KK+LLEVNISIKM+GGT MEI+E     PPP     +RT+RSDT +R VPE+KRLDWVKSLRS  AP P VGKNV F RNKM
Subjt:  KKDLLEVNISIKMDGGTMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGKNVRFDRNKM

XP_023517469.1 uncharacterized protein LOC111781225 [Cucurbita pepo subsp. pepo]4.6e-6071.98Show/hide
Query:  MDQLHNCFNPNILGLGDVSLLPPSRSLHNNAHAKVVNVDEKGLKQAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKT
        MDQL NCF P+ILGL  +SLLPP     +NAHAK++ V EK L  AISEEEMKIRREIE EIERDLEEEIKGGIYQQALRL RLYQHR  SG I PPVKT
Subjt:  MDQLHNCFNPNILGLGDVSLLPPSRSLHNNAHAKVVNVDEKGLKQAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKT

Query:  KKDLLEVNISIKMDGGTMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGKNVRFDRNKM
        KK+LLEVNISIKM+GGT MEI++     PPP    R+RT+RSDT +R VPE+KRLDWVKSLRS  AP P VGKNV F RNKM
Subjt:  KKDLLEVNISIKMDGGTMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGKNVRFDRNKM

XP_038883628.1 uncharacterized protein LOC120074545 [Benincasa hispida]8.0e-7384.32Show/hide
Query:  MDQLHNCFNPNILGLGDVSLLPPSRSLHNNAHAKVVNVDEKGLKQAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKT
        MDQLHNCF+PNILGL D+SLLPPS S H N HAKVV V++KGL+ AISEEEMKIRREIENEIERDLEEEIKGGIYQ ALRL+RLYQHRK SGHIK P+KT
Subjt:  MDQLHNCFNPNILGLGDVSLLPPSRSLHNNAHAKVVNVDEKGLKQAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKT

Query:  KKDLLEVNISIKMDGGTMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGKNVRFDRNKMAAP
        KKDLLEVNISIKMDGGTMMEIRETKK APPP E LR RTSRSDTLA AVPEMKRLDW KSLRS  AP PFV +NVRFDRNKMA P
Subjt:  KKDLLEVNISIKMDGGTMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGKNVRFDRNKMAAP

TrEMBL top hitse value%identityAlignment
A0A0A0KJZ6 Uncharacterized protein7.4e-5677.71Show/hide
Query:  VSLLPPSRSLHNNAHAKVVNVDEKGLK-QAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKTKKDLLEVNISIKMDGG
        +SL PPSRS HNNAHA +V ++EKGLK + ISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLY  RKNS HI P  K KK+LLEVNISIKMDGG
Subjt:  VSLLPPSRSLHNNAHAKVVNVDEKGLK-QAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKTKKDLLEVNISIKMDGG

Query:  TMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGK
        T MEI+ETKKEAP P E LR RTSRS+T +R+VPEMKRLDW KSLRS  AP+P +GK
Subjt:  TMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGK

A0A1S3B1F7 uncharacterized protein LOC1034849421.9e-5981.53Show/hide
Query:  VSLLPPSRSLHNNAHAKVVNVDEKGLK-QAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKTKKDLLEVNISIKMDGG
        +SLL PSRS HNNAHA +V ++EKGLK + ISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLY HRKNS HIKP  K  K+LLEVNISIKMDGG
Subjt:  VSLLPPSRSLHNNAHAKVVNVDEKGLK-QAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKTKKDLLEVNISIKMDGG

Query:  TMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGK
        T MEIRETKKEAPPP E LR RTSRS+TL+R+VPEMKRLDW KSLRS  AP+PFVGK
Subjt:  TMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGK

A0A6J1HFP1 uncharacterized protein LOC111463142 isoform X19.3e-5969.11Show/hide
Query:  MDQLHNCFNPNI---------LGLGDVSLLPPSRSLHNNAHAKVVNVDEKGLKQAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNS
        MDQL NCF P+I         LGL  +SLLPP     +NAHAK++ V EKGL  AISEEEMKIRREIE EIERDLEEEIKGGIYQQALRL RLYQHR  S
Subjt:  MDQLHNCFNPNI---------LGLGDVSLLPPSRSLHNNAHAKVVNVDEKGLKQAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNS

Query:  GHIKPPVKTKKDLLEVNISIKMDGGTMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGKNVRFDRNKM
        G I PPVKTKK+LLEVNISIKM+GGT MEI++     PPP    R+RT+RSDT +R VPE+KRLDWVKSLRS  AP P VGKNV F RNKM
Subjt:  GHIKPPVKTKKDLLEVNISIKMDGGTMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGKNVRFDRNKM

A0A6J1HHY9 uncharacterized protein LOC111463142 isoform X24.5e-6172.53Show/hide
Query:  MDQLHNCFNPNILGLGDVSLLPPSRSLHNNAHAKVVNVDEKGLKQAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKT
        MDQL NCF P+ILGL  +SLLPP     +NAHAK++ V EKGL  AISEEEMKIRREIE EIERDLEEEIKGGIYQQALRL RLYQHR  SG I PPVKT
Subjt:  MDQLHNCFNPNILGLGDVSLLPPSRSLHNNAHAKVVNVDEKGLKQAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKT

Query:  KKDLLEVNISIKMDGGTMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGKNVRFDRNKM
        KK+LLEVNISIKM+GGT MEI++     PPP    R+RT+RSDT +R VPE+KRLDWVKSLRS  AP P VGKNV F RNKM
Subjt:  KKDLLEVNISIKMDGGTMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGKNVRFDRNKM

A0A6J1KUF8 uncharacterized protein LOC1114972922.9e-6073.08Show/hide
Query:  MDQLHNCFNPNILGLGDVSLLPPSRSLHNNAHAKVVNVDEKGLKQAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKT
        MDQL NCF P+ILGL  +SLLPPS S H N HAK++ V EKGL  AISEEEMKIRREIE EIERDLEEEIKGGIYQQALRL RLYQHR  SG I PP+KT
Subjt:  MDQLHNCFNPNILGLGDVSLLPPSRSLHNNAHAKVVNVDEKGLKQAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKT

Query:  KKDLLEVNISIKMDGGTMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGKNVRFDRNKM
        KK+LLEVNISIKM+GGT MEI+E     PPP     +RT+RSDT +R VPE+KRLDWVKSLRS  AP P VGKNV F RNKM
Subjt:  KKDLLEVNISIKMDGGTMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGKNVRFDRNKM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26290.1 unknown protein1.7e-1250Show/hide
Query:  ISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHI-KPPVKTKKDLLEVNISIKMDGGTMMEIRETKKE
        +S++E +IR E+E EIER+LE E K GIY  AL+L RLY+ R+    +    ++  K +LEVNI+IKM+G T +EI E KKE
Subjt:  ISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHI-KPPVKTKKDLLEVNISIKMDGGTMMEIRETKKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCAGCTCCACAATTGCTTCAACCCCAACATCCTAGGGTTGGGTGATGTGTCACTTTTGCCACCGAGTCGGTCTCTTCATAATAATGCTCATGCAAAAGTGGTAAA
TGTGGATGAGAAGGGTTTAAAGCAAGCAATTTCTGAAGAAGAGATGAAGATCCGACGAGAAATTGAGAATGAAATAGAGAGAGATTTGGAGGAAGAGATTAAGGGAGGGA
TATACCAACAAGCTCTCCGCCTGCACCGCCTTTACCAGCACCGGAAAAATTCCGGTCATATTAAGCCGCCGGTGAAAACCAAGAAAGACCTTTTGGAGGTAAATATCAGC
ATCAAAATGGATGGAGGGACTATGATGGAAATAAGAGAGACCAAAAAGGAGGCGCCGCCGCCGACGGAACGTCTCCGGCAGAGGACTTCCCGGTCCGACACTCTTGCTCG
AGCAGTCCCGGAGATGAAAAGGTTGGATTGGGTGAAGTCTCTTAGGTCGAGGCCGGCGCCGCTGCCATTTGTCGGGAAAAACGTCAGGTTTGATCGGAATAAAATGGCGG
CGCCGATGGCCGGTGCCCGTGCCGTGCAATAA
mRNA sequenceShow/hide mRNA sequence
AAGCCATTCACCCCATGGACCAGCTCCACAATTGCTTCAACCCCAACATCCTAGGGTTGGGTGATGTGTCACTTTTGCCACCGAGTCGGTCTCTTCATAATAATGCTCAT
GCAAAAGTGGTAAATGTGGATGAGAAGGGTTTAAAGCAAGCAATTTCTGAAGAAGAGATGAAGATCCGACGAGAAATTGAGAATGAAATAGAGAGAGATTTGGAGGAAGA
GATTAAGGGAGGGATATACCAACAAGCTCTCCGCCTGCACCGCCTTTACCAGCACCGGAAAAATTCCGGTCATATTAAGCCGCCGGTGAAAACCAAGAAAGACCTTTTGG
AGGTAAATATCAGCATCAAAATGGATGGAGGGACTATGATGGAAATAAGAGAGACCAAAAAGGAGGCGCCGCCGCCGACGGAACGTCTCCGGCAGAGGACTTCCCGGTCC
GACACTCTTGCTCGAGCAGTCCCGGAGATGAAAAGGTTGGATTGGGTGAAGTCTCTTAGGTCGAGGCCGGCGCCGCTGCCATTTGTCGGGAAAAACGTCAGGTTTGATCG
GAATAAAATGGCGGCGCCGATGGCCGGTGCCCGTGCCGTGCAATAATGAGTTTCAGTGATATAGACCTGATTATTCGTTTAAAAGACGTACTTGAAAAAATATATTTAAT
TTGTTTATTTGGATGTTGGCATGCAGCTGGGT
Protein sequenceShow/hide protein sequence
MDQLHNCFNPNILGLGDVSLLPPSRSLHNNAHAKVVNVDEKGLKQAISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYQHRKNSGHIKPPVKTKKDLLEVNIS
IKMDGGTMMEIRETKKEAPPPTERLRQRTSRSDTLARAVPEMKRLDWVKSLRSRPAPLPFVGKNVRFDRNKMAAPMAGARAVQ