; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G008050 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G008050
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUPF0029 domain-containing protein
Genome locationchr01:6361698..6364493
RNA-Seq ExpressionLsi01G008050
SyntenyLsi01G008050
Gene Ontology termsGO:0006446 - regulation of translational initiation (biological process)
InterPro domainsIPR001498 - Impact, N-terminal
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR023582 - Impact family
IPR036956 - Impact, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143447.1 uncharacterized protein LOC101204297 isoform X1 [Cucumis sativus]4.6e-10772.55Show/hide
Query:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG
        MPVAIA AAAP+FRHF +LKLNTRLSSSLGA+ R+KKDMVATASSS+  AGAYTTIKEIVRFE+EIKKSKFIAIAGPVS+EQSAFSFLSQ          
Subjt:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG

Query:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH
                                 + +A+ VGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIR                              
Subjt:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH

Query:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE
         YFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLG+LYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE
Subjt:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE

Query:  LVFYKR
        LVFYKR
Subjt:  LVFYKR

XP_008440556.1 PREDICTED: IMPACT family member in pol 5'region isoform X1 [Cucumis melo]1.4e-10873.86Show/hide
Query:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG
        MPVAIAIAAAP+FRHFK+LKLNTRLSSSLGAI RE+K MVATASSSS  AGAYTTIKEIVRFE+EIKKSKFIAIAGPVSNEQSAFSFLSQ          
Subjt:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG

Query:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH
                                 + +A+ VGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIR                              
Subjt:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH

Query:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE
         YFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLG+LYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE
Subjt:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE

Query:  LVFYKR
        LVFYKR
Subjt:  LVFYKR

XP_008440557.1 PREDICTED: IMPACT family member in pol 5'region isoform X2 [Cucumis melo]2.7e-10773.53Show/hide
Query:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG
        MPVAIAIAAAP+FRHFK+LKLNTRLSSSLGAI RE+K MVATASSSS  AGAYTTIKEIVRFE+EIKKSKFIAIAGPVSNEQSAFSFLSQ          
Subjt:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG

Query:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH
                                       VGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIR                              
Subjt:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH

Query:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE
         YFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLG+LYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE
Subjt:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE

Query:  LVFYKR
        LVFYKR
Subjt:  LVFYKR

XP_022133126.1 uncharacterized protein LOC111005799 [Momordica charantia]6.9e-10370.92Show/hide
Query:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG
        MP AIAIAAAPN R+FK LKLN+RLSSSL A  RE KDMV  ASSSSG AGAYT IKEIVRFE+EIKKSKFIAIAGPVSNEQSAFSFLSQ          
Subjt:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG

Query:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH
                                 + +A+ VGDQYRSNDDGEPSGTAGKPIHSAI SSGIDRVMVVVIR                              
Subjt:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH

Query:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE
         YFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLG+LYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFD VEKLEDAIKSNCSRE
Subjt:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE

Query:  LVFYKR
        L+FYKR
Subjt:  LVFYKR

XP_038881266.1 IMPACT family member in pol 5'region [Benincasa hispida]9.3e-10871.75Show/hide
Query:  MPVAIAIAAAPNFRHFKRL---------KLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQA
        MPVAIAIAAAPN RHFK+L         K NTRLSSSLGA+PREKKDMVATASSSSG +GAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQ 
Subjt:  MPVAIAIAAAPNFRHFKRL---------KLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQA

Query:  LLSWNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLL
                                          + +A+ VGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIR                     
Subjt:  LLSWNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLL

Query:  VDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLED
                  +FGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLG+LYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLED
Subjt:  VDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLED

Query:  AIKSNCSRELVFYKR
        AIKSNCSR+LVFYKR
Subjt:  AIKSNCSRELVFYKR

TrEMBL top hitse value%identityAlignment
A0A0A0KGN8 UPF0029 domain-containing protein2.2e-10772.55Show/hide
Query:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG
        MPVAIA AAAP+FRHF +LKLNTRLSSSLGA+ R+KKDMVATASSS+  AGAYTTIKEIVRFE+EIKKSKFIAIAGPVS+EQSAFSFLSQ          
Subjt:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG

Query:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH
                                 + +A+ VGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIR                              
Subjt:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH

Query:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE
         YFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLG+LYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE
Subjt:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE

Query:  LVFYKR
        LVFYKR
Subjt:  LVFYKR

A0A1S3B202 IMPACT family member in pol 5'region isoform X17.0e-10973.86Show/hide
Query:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG
        MPVAIAIAAAP+FRHFK+LKLNTRLSSSLGAI RE+K MVATASSSS  AGAYTTIKEIVRFE+EIKKSKFIAIAGPVSNEQSAFSFLSQ          
Subjt:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG

Query:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH
                                 + +A+ VGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIR                              
Subjt:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH

Query:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE
         YFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLG+LYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE
Subjt:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE

Query:  LVFYKR
        LVFYKR
Subjt:  LVFYKR

A0A1S3B251 IMPACT family member in pol 5'region isoform X21.3e-10773.53Show/hide
Query:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG
        MPVAIAIAAAP+FRHFK+LKLNTRLSSSLGAI RE+K MVATASSSS  AGAYTTIKEIVRFE+EIKKSKFIAIAGPVSNEQSAFSFLSQ          
Subjt:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG

Query:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH
                                       VGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIR                              
Subjt:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH

Query:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE
         YFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLG+LYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE
Subjt:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE

Query:  LVFYKR
        LVFYKR
Subjt:  LVFYKR

A0A5D3CN06 IMPACT family member in pol 5'region isoform X17.0e-10973.86Show/hide
Query:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG
        MPVAIAIAAAP+FRHFK+LKLNTRLSSSLGAI RE+K MVATASSSS  AGAYTTIKEIVRFE+EIKKSKFIAIAGPVSNEQSAFSFLSQ          
Subjt:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG

Query:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH
                                 + +A+ VGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIR                              
Subjt:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH

Query:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE
         YFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLG+LYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE
Subjt:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE

Query:  LVFYKR
        LVFYKR
Subjt:  LVFYKR

A0A6J1BU50 uncharacterized protein LOC1110057993.4e-10370.92Show/hide
Query:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG
        MP AIAIAAAPN R+FK LKLN+RLSSSL A  RE KDMV  ASSSSG AGAYT IKEIVRFE+EIKKSKFIAIAGPVSNEQSAFSFLSQ          
Subjt:  MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAG

Query:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH
                                 + +A+ VGDQYRSNDDGEPSGTAGKPIHSAI SSGIDRVMVVVIR                              
Subjt:  SASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACH

Query:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE
         YFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLG+LYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFD VEKLEDAIKSNCSRE
Subjt:  MYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRE

Query:  LVFYKR
        L+FYKR
Subjt:  LVFYKR

SwissProt top hitse value%identityAlignment
P27862 IMPACT family member YigZ1.1e-0727.8Show/hide
Query:  EIKKSKFIAIAGPVSNEQSAFSFLSQA----------LLSWNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHS
        EIKKS+FI +       ++A +F+              ++W   AG+   SQ LG S                            DDGEP+GTAGKP+ +
Subjt:  EIKKSKFIAIAGPVSNEQSAFSFLSQA----------LLSWNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHS

Query:  AIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQ
         ++ SG+  +  VV+R                               Y+GGI LGTGGLV+AYGG  ++ L+   T   + K P+        L   YHQ
Subjt:  AIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQ

Query:  LQSFQ
        L   +
Subjt:  LQSFQ

P32437 IMPACT family member YvyE3.6e-0928.23Show/hide
Query:  AYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLS-WNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGK
        +Y T+KE    E  I+KS+FI     VS EQ A  F+ +     WN+    ++Y  ++G ++++                      ++NDDGEPSGTAG 
Subjt:  AYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLS-WNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGK

Query:  PIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGI
        P+   +    +     VV R                               YFGGIKLG GGL+RAYG   SE L        K    M     +  LG 
Subjt:  PIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGI

Query:  LYHQLQSFQ
        + ++L+  Q
Subjt:  LYHQLQSFQ

P32438 IMPACT family member in pol 5'region (Fragment)1.3e-1430.61Show/hide
Query:  IKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVM
        I++S+F+A A P ++E+ A +FL+                                    + YA+ +G  YR +DDGEP    G+PI  AI ++G+DRV+
Subjt:  IKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVM

Query:  VVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVE
        V+V+R                               YFGG+KLG GGLVRAYGGVA+E L+ A    +   V +   VPF  +G ++  L++  +E
Subjt:  VVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVE

P44842 IMPACT family member HI_07224.2e-1026.67Show/hide
Query:  YTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLS--------WNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEP
        Y   K  V FE EIKKS+FI         + A +F ++            W + AG  + S  LG S                            DDGEP
Subjt:  YTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLS--------WNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEP

Query:  SGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVP
        +GTAGKP+ SA+  S +  +  VV+R                               Y+GGI LGTGGLVRAYG    + LK  ++ +   +    ++  
Subjt:  SGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEVP

Query:  FDLLGILYHQLQSFQVEDIKQDYDS
        +  L ++    + +QVE + Q + +
Subjt:  FDLLGILYHQLQSFQVEDIKQDYDS

Arabidopsis top hitse value%identityAlignment
AT4G38090.1 Ribosomal protein S5 domain 2-like superfamily protein3.2e-6655.34Show/hide
Query:  SSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGD-QYRSNDDGE
        S +  +G++TT+KE V  E+EIKKSKFIAIAGP+S+EQSA  FLSQ           AS+                     + +A+ +GD  +R +DDGE
Subjt:  SSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGD-QYRSNDDGE

Query:  PSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEV
        PSGTAGKPI SAI+SSG+DRVMVVVIR                               YFGGIKLGTGGLVRAYGGV S+CLK+A +C+VKSKV MGVEV
Subjt:  PSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEV

Query:  PFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELVFYK
         FDLLG+LY+QLQS   EDIK+DYD+GKDG  MV+FKV+FD V+KLEDAIKSNC R+LVFYK
Subjt:  PFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELVFYK

AT4G38090.2 Ribosomal protein S5 domain 2-like superfamily protein1.5e-4250.47Show/hide
Query:  SSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGD-QYRSNDDGE
        S +  +G++TT+KE V  E+EIKKSKFIAIAGP+S+EQSA  FLSQ           AS+                     + +A+ +GD  +R +DDGE
Subjt:  SSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGD-QYRSNDDGE

Query:  PSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEV
        PSGTAGKPI SAI+SSG+DRVMVVVIR                               YFGGIKLGTGGLVRAYGGV S+CLK+A +C+VKSKV MGVEV
Subjt:  PSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEV

Query:  PFDLLGILYHQL
         FDLLG+LY+Q+
Subjt:  PFDLLGILYHQL

AT4G38090.3 Ribosomal protein S5 domain 2-like superfamily protein1.9e-3448.45Show/hide
Query:  SSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGD-QYRSNDDGE
        S +  +G++TT+KE V  E+EIKKSKFIAIAGP+S+EQSA  FLSQ           AS+                     + +A+ +GD  +R +DDGE
Subjt:  SSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGD-QYRSNDDGE

Query:  PSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV
        PSGTAGKPI SAI+SSG+DRVMVVVIR                               YFGGIKLGTGGLVRAYGGV S+CLK+A +C+VKSKV
Subjt:  PSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKV

AT4G38090.4 Ribosomal protein S5 domain 2-like superfamily protein1.7e-6253.82Show/hide
Query:  SSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGD-QYRSNDDGE
        S +  +G++TT+KE V  E+EIKKSKFIAIAGP+S+EQSA  FLSQ           AS+                     + +A+ +GD  +R +DDGE
Subjt:  SSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAGSASYSQLLGVSEYLLWGSSSSFTVVSYYAHHVGD-QYRSNDDGE

Query:  PSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEV
        PSGTAGKPI SAI+SSG+DRVMVVVIR                               YFGGIKLGTGGLVRAYGGV S+CLK+A +C+V+    MGVEV
Subjt:  PSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACHMYFGGIKLGTGGLVRAYGGVASECLKSAQTCVVKSKVPMGVEV

Query:  PFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELVFYK
         FDLLG+LY+QLQS   EDIK+DYD+GKDG  MV+FKV+FD V+KLEDAIKSNC R+LVFYK
Subjt:  PFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELVFYK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGTGGCAATTGCAATTGCAGCAGCGCCAAATTTTCGTCACTTCAAGAGACTGAAACTCAATACTCGATTATCTTCCTCACTGGGGGCGATTCCTCGAGAGAAGAA
AGATATGGTCGCAACAGCCAGTAGCAGTAGCGGAAAAGCAGGCGCATACACGACGATTAAAGAGATTGTAAGATTCGAAAGAGAAATCAAGAAGAGCAAGTTCATTGCAA
TCGCTGGTCCTGTCTCCAATGAGCAATCTGCCTTCTCTTTTCTCTCCCAGGCATTGTTGTCCTGGAACTCAGGTGCGGGATCCGCGAGCTACTCACAATTGCTGGGCGTA
TCAGAATATCTATTATGGGGTAGTTCGTCATCCTTCACAGTGGTCTCATATTATGCTCATCACGTTGGAGATCAATATAGGTCTAATGATGATGGCGAACCATCTGGTAC
TGCTGGAAAACCAATTCATTCTGCTATTGTTTCTTCAGGTATTGACAGAGTCATGGTGGTCGTGATCAGGATCTCTGTACGAAATTTCCTTGGGCGAAATCAGTTACTTG
GAATCCTCTTGTTAATGCTTCTGGTTGATGTGAATGTGTATGCTTGCCACATGTATTTTGGAGGTATCAAACTTGGCACTGGGGGACTAGTCAGGGCTTATGGAGGAGTG
GCTTCTGAATGCCTGAAGAGTGCCCAAACATGTGTTGTGAAATCTAAGGTTCCAATGGGTGTGGAGGTACCATTCGATCTTTTAGGGATCTTGTACCACCAGTTGCAATC
TTTTCAAGTCGAGGATATTAAGCAGGATTATGACAGTGGTAAAGATGGTATTACCATGGTGACATTCAAGGTTGATTTCGATTGTGTTGAGAAGTTGGAGGATGCTATCA
AATCTAATTGTAGCCGTGAATTAGTCTTTTACAAGCGATAA
mRNA sequenceShow/hide mRNA sequence
TTAATATCAACTTTAGGAAAGGACTATTGAATGGAGAATCGCCCTCGTCTTGTCCAAAGAGAATCGGAGGCTCCATCAAATGCCTGTGGCAATTGCAATTGCAGCAGCGC
CAAATTTTCGTCACTTCAAGAGACTGAAACTCAATACTCGATTATCTTCCTCACTGGGGGCGATTCCTCGAGAGAAGAAAGATATGGTCGCAACAGCCAGTAGCAGTAGC
GGAAAAGCAGGCGCATACACGACGATTAAAGAGATTGTAAGATTCGAAAGAGAAATCAAGAAGAGCAAGTTCATTGCAATCGCTGGTCCTGTCTCCAATGAGCAATCTGC
CTTCTCTTTTCTCTCCCAGGCATTGTTGTCCTGGAACTCAGGTGCGGGATCCGCGAGCTACTCACAATTGCTGGGCGTATCAGAATATCTATTATGGGGTAGTTCGTCAT
CCTTCACAGTGGTCTCATATTATGCTCATCACGTTGGAGATCAATATAGGTCTAATGATGATGGCGAACCATCTGGTACTGCTGGAAAACCAATTCATTCTGCTATTGTT
TCTTCAGGTATTGACAGAGTCATGGTGGTCGTGATCAGGATCTCTGTACGAAATTTCCTTGGGCGAAATCAGTTACTTGGAATCCTCTTGTTAATGCTTCTGGTTGATGT
GAATGTGTATGCTTGCCACATGTATTTTGGAGGTATCAAACTTGGCACTGGGGGACTAGTCAGGGCTTATGGAGGAGTGGCTTCTGAATGCCTGAAGAGTGCCCAAACAT
GTGTTGTGAAATCTAAGGTTCCAATGGGTGTGGAGGTACCATTCGATCTTTTAGGGATCTTGTACCACCAGTTGCAATCTTTTCAAGTCGAGGATATTAAGCAGGATTAT
GACAGTGGTAAAGATGGTATTACCATGGTGACATTCAAGGTTGATTTCGATTGTGTTGAGAAGTTGGAGGATGCTATCAAATCTAATTGTAGCCGTGAATTAGTCTTTTA
CAAGCGATAAATTATACAACTATTCTTTGTAAATGAATGCAGAGAAGGGAGATACACATCAATATAAAGATGAAATCAAGTGCACATCCAATAAATGGCGGGTGGTATGA
GGTAGGTGACTGATGACTTTGTACAACTAGTTACATTGCAGAATAACCTAGACGTCCTTTGTAGAATACATTTCCCATACTAATGAATACTTAGTTTGTTTACTGCCTGC
TTCATTTTCATGTTCCTTCATTAACCTATACACAATGCTACTGGCATAGTCGTGTAGAAGCATCATATTTTTCAGAAGCAAGGGGCAGTAAATTCTTATTTAATTGTTGA
TAACAACTATCAAGGAACCGG
Protein sequenceShow/hide protein sequence
MPVAIAIAAAPNFRHFKRLKLNTRLSSSLGAIPREKKDMVATASSSSGKAGAYTTIKEIVRFEREIKKSKFIAIAGPVSNEQSAFSFLSQALLSWNSGAGSASYSQLLGV
SEYLLWGSSSSFTVVSYYAHHVGDQYRSNDDGEPSGTAGKPIHSAIVSSGIDRVMVVVIRISVRNFLGRNQLLGILLLMLLVDVNVYACHMYFGGIKLGTGGLVRAYGGV
ASECLKSAQTCVVKSKVPMGVEVPFDLLGILYHQLQSFQVEDIKQDYDSGKDGITMVTFKVDFDCVEKLEDAIKSNCSRELVFYKR