; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G008130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G008130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:6444987..6446475
RNA-Seq ExpressionLsi01G008130
SyntenyLsi01G008130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036346.1 uncharacterized protein E6C27_scaffold18G001450 [Cucumis melo var. makuwa]3.5e-7695.33Show/hide
Query:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIG
        MAVS SRFSLWFWNGKEKETVANGS PNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRI+WEYDFVMVPSG DDMQ+SDS DEADWSIG
Subjt:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIG

Query:  WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSP
        WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSN+ELLAAIKKLQNEFSP
Subjt:  WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSP

XP_004143444.1 uncharacterized protein LOC101203646 isoform X1 [Cucumis sativus]3.0e-7594.04Show/hide
Query:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIG
        MAVS SRFSLWFWNGKE+ETVANGS PNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKW SKKETRI WEYDFVMVPSG DDMQ+SDS DEADWSIG
Subjt:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIG

Query:  WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSPE
        WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSN+ELLAAIKKLQNEFSPE
Subjt:  WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSPE

XP_008440536.1 PREDICTED: uncharacterized protein LOC103484930 isoform X1 [Cucumis melo]9.2e-7795.36Show/hide
Query:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIG
        MAVS SRFSLWFWNGKEKETVANGS PNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRI+WEYDFVMVPSG DDMQ+SDS DEADWSIG
Subjt:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIG

Query:  WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSPE
        WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSN+ELLAAIKKLQNEFSPE
Subjt:  WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSPE

XP_008440537.1 PREDICTED: uncharacterized protein LOC103484930 isoform X2 [Cucumis melo]3.5e-7695.33Show/hide
Query:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIG
        MAVS SRFSLWFWNGKEKETVANGS PNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRI+WEYDFVMVPSG DDMQ+SDS DEADWSIG
Subjt:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIG

Query:  WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSP
        WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSN+ELLAAIKKLQNEFSP
Subjt:  WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSP

XP_038882086.1 uncharacterized protein LOC120073358 [Benincasa hispida]1.7e-7594.08Show/hide
Query:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVP-SGDDDMQVSDSADEADWSI
        MAVS SRFSLWFWNGKEKETVANGSPPNSSSEFG GLREPESLKFKRVDLPSSSKKVNKQKWQSKKET I+WEYDFVMVP SGDDDMQ++DS DEADWSI
Subjt:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVP-SGDDDMQVSDSADEADWSI

Query:  GWLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSPE
        GWLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSN+ELLAAIKKLQNEFSPE
Subjt:  GWLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSPE

TrEMBL top hitse value%identityAlignment
A0A0A0KLR5 Uncharacterized protein5.5e-7594Show/hide
Query:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIG
        MAVS SRFSLWFWNGKE+ETVANGS PNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKW SKKETRI WEYDFVMVPSG DDMQ+SDS DEADWSIG
Subjt:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIG

Query:  WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSP
        WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSN+ELLAAIKKLQNEFSP
Subjt:  WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSP

A0A1S3B0X6 uncharacterized protein LOC103484930 isoform X14.5e-7795.36Show/hide
Query:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIG
        MAVS SRFSLWFWNGKEKETVANGS PNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRI+WEYDFVMVPSG DDMQ+SDS DEADWSIG
Subjt:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIG

Query:  WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSPE
        WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSN+ELLAAIKKLQNEFSPE
Subjt:  WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSPE

A0A1S3B1D7 uncharacterized protein LOC103484930 isoform X21.7e-7695.33Show/hide
Query:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIG
        MAVS SRFSLWFWNGKEKETVANGS PNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRI+WEYDFVMVPSG DDMQ+SDS DEADWSIG
Subjt:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIG

Query:  WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSP
        WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSN+ELLAAIKKLQNEFSP
Subjt:  WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSP

A0A5D3CMT4 Uncharacterized protein1.7e-7695.33Show/hide
Query:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIG
        MAVS SRFSLWFWNGKEKETVANGS PNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRI+WEYDFVMVPSG DDMQ+SDS DEADWSIG
Subjt:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIG

Query:  WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSP
        WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSN+ELLAAIKKLQNEFSP
Subjt:  WLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSP

A0A6J1IP42 uncharacterized protein LOC111478669 isoform X16.5e-6886.18Show/hide
Query:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKE-TRIDWEYDFVMVPSGDDDMQVSDSADEADWSI
        MAVSFSRFSLWFW GKEKE+VANG+P NSS+E GTGLREPESLK KRVDL S SKKV  QKW+SKKE TRIDWEYDF++VPSG DDMQ+ DSADEADWSI
Subjt:  MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKE-TRIDWEYDFVMVPSGDDDMQVSDSADEADWSI

Query:  GWLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSPE
        GWLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSN+ELLAAIK LQ+EFSPE
Subjt:  GWLEPHGPGFQSDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G38060.1 unknown protein1.2e-1039.67Show/hide
Query:  REPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIGWLEPHGPGFQSDD-----SFAVLVPSYSNRCKEVVEG
        +E E+LKF     P+   +VNK     +KE  ++         SG + + V  + D  +WS+GW EPHGP FQSDD      F VLVP Y    + VVEG
Subjt:  REPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIGWLEPHGPGFQSDD-----SFAVLVPSYSNRCKEVVEG

Query:  S---NLELLAAIKKLQNEFSP
        S   N +LL+A+K L N   P
Subjt:  S---NLELLAAIKKLQNEFSP

AT4G38060.2 unknown protein7.2e-1139.34Show/hide
Query:  REPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIGWLEPHGPGFQSDD-----SFAVLVPSYSNRCKEVVEG
        +E E+LKF     P+   +VNK     +KE  ++         SG + + V  + D  +WS+GW EPHGP FQSDD      F VLVP Y    + VVEG
Subjt:  REPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIGWLEPHGPGFQSDD-----SFAVLVPSYSNRCKEVVEG

Query:  S---NLELLAAIKKLQNEFSPE
        S   N +LL+A+K L N   P+
Subjt:  S---NLELLAAIKKLQNEFSPE

AT5G65480.1 unknown protein1.2e-1033.8Show/hide
Query:  MAVSFSRFSLWFWNGKE-KETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSI
        MAVSF R   W   G   K+     S P  SS     L++  + K       SSS K  K+ W  +  +    E D +          V    D+ +WSI
Subjt:  MAVSFSRFSLWFWNGKE-KETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSI

Query:  GWLEPHGPGFQSDD----SFAVLVPSYSNRCKEVVEGSNLEL
        GW+EPHGPGF+++D     F VLVP Y    K+V++GS  ++
Subjt:  GWLEPHGPGFQSDD----SFAVLVPSYSNRCKEVVEGSNLEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTGTCTTTCAGCCGTTTTTCATTGTGGTTTTGGAATGGGAAGGAGAAAGAGACTGTTGCAAATGGGTCGCCTCCAAATTCTTCATCCGAGTTTGGCACTGGTCT
GAGAGAACCGGAGAGTCTTAAGTTCAAGAGGGTGGACTTGCCTTCATCATCAAAGAAAGTCAATAAGCAGAAATGGCAAAGTAAGAAAGAAACAAGGATTGATTGGGAAT
ACGATTTTGTGATGGTACCATCCGGTGATGATGACATGCAAGTGTCTGATTCTGCTGATGAGGCTGATTGGTCTATTGGTTGGTTGGAGCCTCACGGTCCTGGCTTTCAG
AGTGATGATAGTTTTGCTGTTCTGGTCCCTTCCTATAGCAATCGTTGCAAGGAGGTGGTGGAGGGTTCAAACCTGGAGCTTTTGGCTGCCATAAAAAAACTTCAAAATGA
ATTCTCTCCTGAACGTACTGTGATTACTGCTGCAATGGAACTAGGAGTTAAAGGGAATGGTTGGGTTGACATTGATTGGGGATGTTTTGGAGCTGTTTTCAGCAATGTTG
TTTGTTTTATGTTTGAAGATAAAACTGATTCTTAG
mRNA sequenceShow/hide mRNA sequence
AATGGGACGGAGAGAATATGAGGGGAAAGTGCGATCATTTGAGGGGAAGTAACCTGTTCCGATTTCTCAGTCCTGAGAGATTTCAGGAATCCTTTTTCCCCATTTTGTTT
TGAGTTGCAATCTTTTGGAATAAGACGATCTTGATTTTCTTATCCGATCAAAAGAGAAAACAATCTTTGAACTCAAATATTTTTTTTTTGTTGTTTTTGTTGTTGTGGTT
CGCATTTTTTTGGAGCAACAACTGATATATTCTTAGAGTGGGAAAAGATTCTGATTGTGTTTTGGCCTGAAAGTGACTGTATTTAACCTGAGCTTTTGCTATTAGTTAAC
TTTGTTTTGATGCTTTCTGGGTTCCGTATATGAGAAACTTTGTTTCCATTTGTAGCGATTTCTTCTGGATGAGAAAATCGGGGTTATTAATATGATTTGGAGCATATCCT
TGGTTGACCGAAACTGTGTTTGAGTAATTGGAGAAGAAATTTTGGAGAATTTTCTTTTTCCCTTACCCAATCGTACTCCAGAGAAGTTCTGAAAGTTGGGACTTTCATAT
TATTGATCTTTTGAGATCTTGATAAGAGATTTCCTAGTTTTTTTCTTTTACTTAAAACTAACTTTTTTCATTTTCCATATGGAGATTACTGGATCAAACAAGTGCCATCT
GCCACTTCTTTCCATTTTGAGATTCTACCTGTAAATTCTTTTGGGAAAATCCTCTTATTTTCCTTACATAAAATTTTCCCCAAAAGTGTTTCACTCATCTGGAGTAGAAC
CGATGGCCGTGTCTTTCAGCCGTTTTTCATTGTGGTTTTGGAATGGGAAGGAGAAAGAGACTGTTGCAAATGGGTCGCCTCCAAATTCTTCATCCGAGTTTGGCACTGGT
CTGAGAGAACCGGAGAGTCTTAAGTTCAAGAGGGTGGACTTGCCTTCATCATCAAAGAAAGTCAATAAGCAGAAATGGCAAAGTAAGAAAGAAACAAGGATTGATTGGGA
ATACGATTTTGTGATGGTACCATCCGGTGATGATGACATGCAAGTGTCTGATTCTGCTGATGAGGCTGATTGGTCTATTGGTTGGTTGGAGCCTCACGGTCCTGGCTTTC
AGAGTGATGATAGTTTTGCTGTTCTGGTCCCTTCCTATAGCAATCGTTGCAAGGAGGTGGTGGAGGGTTCAAACCTGGAGCTTTTGGCTGCCATAAAAAAACTTCAAAAT
GAATTCTCTCCTGAACGTACTGTGATTACTGCTGCAATGGAACTAGGAGTTAAAGGGAATGGTTGGGTTGACATTGATTGGGGATGTTTTGGAGCTGTTTTCAGCAATGT
TGTTTGTTTTATGTTTGAAGATAAAACTGATTCTTAG
Protein sequenceShow/hide protein sequence
MAVSFSRFSLWFWNGKEKETVANGSPPNSSSEFGTGLREPESLKFKRVDLPSSSKKVNKQKWQSKKETRIDWEYDFVMVPSGDDDMQVSDSADEADWSIGWLEPHGPGFQ
SDDSFAVLVPSYSNRCKEVVEGSNLELLAAIKKLQNEFSPERTVITAAMELGVKGNGWVDIDWGCFGAVFSNVVCFMFEDKTDS