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Lsi01G008280 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G008280
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein BRICK 1
Genome locationchr01:6569434..6571006
RNA-Seq ExpressionLsi01G008280
SyntenyLsi01G008280
Gene Ontology termsGO:0008064 - regulation of actin polymerization or depolymerization (biological process)
GO:0048870 - cell motility (biological process)
GO:0005856 - cytoskeleton (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031209 - SCAR complex (cellular component)
GO:0044877 - protein-containing complex binding (molecular function)
InterPro domainsIPR033378 - Protein BRICK1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036361.1 protein BRICK 1 [Cucumis melo var. makuwa]4.3e-3486.73Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFG------------KATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFG            +ATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFG------------KATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT

XP_004143434.1 protein BRICK 1 isoform X6 [Cucumis sativus]1.5e-3497.67Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT

XP_022132950.1 protein BRICK 1 [Momordica charantia]5.6e-3496.51Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQVSTASAN SLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT

XP_022963287.1 protein BRICK 1 [Cucurbita moschata]7.3e-3495.35Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISIN+RRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQVSTASAN SLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT

XP_038883736.1 protein BRICK 1 [Benincasa hispida]4.3e-3496.51Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFT+
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT

TrEMBL top hitse value%identityAlignment
A0A0A0KG45 Protein BRICK17.1e-3597.67Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT

A0A1S3B198 protein BRICK 17.1e-3597.67Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT

A0A5D3CQS5 Protein BRICK 12.1e-3486.73Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFG------------KATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFG            +ATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFG------------KATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT

A0A6J1BTZ0 protein BRICK 12.7e-3496.51Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQVSTASAN SLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT

A0A6J1KN25 protein BRICK 13.5e-3495.35Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT
        MARAGGITNAVNVGIAVQADWENREFISHISIN+RRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQVSTASAN SLFTT
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT

SwissProt top hitse value%identityAlignment
A2BD66 Probable protein BRICK1-B2.1e-0745.76Show/hide
Query:  VQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVS
        +  DW NRE+I  I+ +++++ DFL  F   + +S+LA+LNEKL TLERR+E +E +V+
Subjt:  VQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVS

Q54X65 Protein BRICK11.2e-0745Show/hide
Query:  VQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVST
        +Q DWE REFI  +SIN++++ +FL  F + +T++KL+ LNEKL  L+R+++ LE    T
Subjt:  VQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVST

Q84VA7 Probable protein BRICK13.1e-2777.91Show/hide
Query:  MARAG--GITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLF
        MARAG  G+ N VNVGIAVQADWENREFIS+IS+NVRRLFDFL+ F +ATTKSKLASLNEKLD LER+LE+LEVQVS+A+ N S+F
Subjt:  MARAG--GITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLF

Q8RW98 Protein BRICK12.4e-2776.19Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLF
        M R GG+ N VNVGIAVQADWENREFIS+IS+NVRRLFDFL+ F +ATTKSKLASLNEKLD LER+LE+LEVQV +A+ N S+F
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLF

Q94JY4 Protein BRICK 16.4e-3387.21Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT
        MA+AGGITNAVNVGIAVQADWENREFISHIS+NVRRLF+FLV F ++TTKSKLASLNEKLD LERRLEMLEVQVSTA+AN SLF T
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT

Arabidopsis top hitse value%identityAlignment
AT2G22640.1 BRICK1, putative4.6e-3487.21Show/hide
Query:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT
        MA+AGGITNAVNVGIAVQADWENREFISHIS+NVRRLF+FLV F ++TTKSKLASLNEKLD LERRLEMLEVQVSTA+AN SLF T
Subjt:  MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGAGCTGGAGGAATTACTAACGCTGTAAACGTAGGGATAGCGGTTCAAGCTGATTGGGAGAACCGCGAATTCATCTCTCATATTTCCATCAATGTTCGTCGTCT
CTTTGATTTCCTCGTCCATTTTGGTAAGGCAACAACAAAGAGCAAGTTGGCATCTTTGAACGAGAAGCTTGATACGCTGGAGCGGCGGCTTGAAATGCTTGAAGTCCAAG
TCAGTACTGCATCTGCTAACTCATCTCTTTTTACCACTTAA
mRNA sequenceShow/hide mRNA sequence
ATTTAATAAGTCTTGAGTCTAATTGGATGAAATTGGAAGATTAGGTTAGAGCTTGAAAGAGGACAAAGGGATTTTTTTTCCCAAAAAAGAAAAAAAGAAAAATCAATTCC
AGTTTTGATCGCGGGAAGAAAGATATTGGTGTGCATAATAGTTTGGTGAAAATGGTAAGCCTGGTTCGGCTGGTGGTTTATGCTATGCCATATTGAAATTGGGAGCTCAG
CCCTTGCCCTTGAAGAATCCAAGCGATCTGCTTATCTGAGTTCGCGCCATAGATAAAATCTGTGTGATGGCTAGAGCTGGAGGAATTACTAACGCTGTAAACGTAGGGAT
AGCGGTTCAAGCTGATTGGGAGAACCGCGAATTCATCTCTCATATTTCCATCAATGTTCGTCGTCTCTTTGATTTCCTCGTCCATTTTGGTAAGGCAACAACAAAGAGCA
AGTTGGCATCTTTGAACGAGAAGCTTGATACGCTGGAGCGGCGGCTTGAAATGCTTGAAGTCCAAGTCAGTACTGCATCTGCTAACTCATCTCTTTTTACCACTTAATGT
TTACTCCACCTTGTATAAAAAGAGACAGCTCCCTGTTATAATTTTTGTCTTGTTTTCACTAGTGTAAGCGAAATACGAGGATCTTGTGTAAACCCAGATTATGAGTACAC
ATTGATGGTAAAATCATATCTGCCCTAGTGTTGTTATACTGATCTACTTGAATTCAGATTCATGTTGTGTGCTTGAACAAGGGATATGTACTATCATGATAAGAGGTTAA
AGTATCTTTGATGCCAGTGGAACAAGACAACTGTATCTGTTGAGCCTGTTACCCTGAGCGTTGGTCAAAATAGCATTAAAATGTGTATTAGCTAACACAGTTTCTCCAAG
ATCATTTTAGTTTCTTTGGCTCAACTGATGGAATCACTACCAAGTTGTTAAATGGCCCGAGTCTTTGGTGAAGGTTGTTGAAAACACCCCTCCAAGTTCTTTGGGTCATC
TTGTCCTTAAATTACCTCCACTCTTCATCAGTTCGTCCACCATATTATCTCAACTTTCCTTCAAATAATTAGGAAGTTCAAATGGATTGATCAAATAATTGCTCTTAGCC
TTTTCTATTGCATTTTTCTTAGCCAATTGATTGATCAAATAATTGCTCTTGGCCTTTTTCTATTGC
Protein sequenceShow/hide protein sequence
MARAGGITNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQVSTASANSSLFTT