CuGenDBv2

Gene ID	Lsi01G008330
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Hydroxyproline-rich glycoprotein family protein
Genome location	chr01:6609669..6611024
RNA-Seq Expression	Lsi01G008330
Synteny	Lsi01G008330
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR037699 - Uncharacterized protein At5g65660-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008440504.1 PREDICTED: uncharacterized protein At5g65660 [Cucumis melo]

3.6e-56

89.47

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD-HDLHLRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKF
        MESP+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS SQPL D HDLH +S PSKSN  +QDLEKNQRESLSVLMPGDSIPKF
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD-HDLHLRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY
        IAMPCPREP RPEMIEVKVEKP KPLRIAVPFY
Subjt:  IAMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY

XP_022133072.1 uncharacterized protein At5g65660 [Momordica charantia]

1.9e-57

91.67

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLHLRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKFI
        MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ  H H LHL SSPSKSN NS DLE NQR+SLSVLMPGDSIPKFI
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLHLRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKFI

Query:  AMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY
        AMPCPREPPRPEMI+VKVEKPPKP RIAVPFY
Subjt:  AMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY

XP_022962719.1 uncharacterized protein At5g65660-like [Cucurbita moschata]

1.6e-56

87.97

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLH-LRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKF
        ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q LH HD H L SSPSKSN  + DLEKNQRESLSV+MPGDSIPKF
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLH-LRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY
        IAMPCPREPPRPEMI VKVEKPPKP RIA+PFY
Subjt:  IAMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY

XP_023518276.1 uncharacterized protein At5g65660-like [Cucurbita pepo subsp. pepo]

1.2e-56

87.97

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLH-LRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKF
        ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q LH HD H L SSPSKSN  + DLEKNQRESLSV+MPGDSIPKF
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLH-LRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY
        IAMPCPREPPRPEMI+VKVEKPPKP RIA+PFY
Subjt:  IAMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY

XP_038881262.1 uncharacterized protein At5g65660-like [Benincasa hispida]

2.7e-64

96.97

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLHLRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKFI
        MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD DLHLRSSPSKSN  SQDLEKNQRESLSVLMPGDSIPKFI
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLHLRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKFI

Query:  AMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY
        AMPCPREPPR EMIEVKVEKPPKPLRIAVPFY
Subjt:  AMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KGL6 Uncharacterized protein

2.5e-55

87.97

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDH-DLHLRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKF
        MESP+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS+SQPL DH  LHL+S PSKSN  + DLEKNQRESLSVLMPGDSIPKF
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDH-DLHLRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY
        IAMPCPREP RPE IEVKVEKP KPLRIAVPFY
Subjt:  IAMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY

A0A1S3B1W3 uncharacterized protein At5g65660

1.7e-56

89.47

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD-HDLHLRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKF
        MESP+FSPPH+D SRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRS SQPL D HDLH +S PSKSN  +QDLEKNQRESLSVLMPGDSIPKF
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHD-HDLHLRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY
        IAMPCPREP RPEMIEVKVEKP KPLRIAVPFY
Subjt:  IAMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY

A0A6J1BVL2 uncharacterized protein At5g65660

9.2e-58

91.67

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLHLRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKFI
        MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQ  H H LHL SSPSKSN NS DLE NQR+SLSVLMPGDSIPKFI
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLHLRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKFI

Query:  AMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY
        AMPCPREPPRPEMI+VKVEKPPKP RIAVPFY
Subjt:  AMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY

A0A6J1HHX0 uncharacterized protein At5g65660-like

7.8e-57

87.97

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLH-LRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKF
        ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q LH HD H L SSPSKSN  + DLEKNQRESLSV+MPGDSIPKF
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLH-LRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY
        IAMPCPREPPRPEMI VKVEKPPKP RIA+PFY
Subjt:  IAMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY

A0A6J1KQE2 uncharacterized protein At5g65660-like

3.9e-56

87.22

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Query:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLH-LRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKF
        ME+PDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRS+RRSA+Q LH HD H L SSPSKSN  + DLEKNQRESLSV+MPGDSIPKF
Subjt:  MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLH-LRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKF

Query:  IAMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY
        IAMPCPREPPRPEMI+V VEKPPKP RIA+PFY
Subjt:  IAMPCPREPPRPEMIEVKVEKPPKPLRIAVPFY

SwissProt top hits

e value

%identity

Alignment

Q9LSK9 Uncharacterized protein At5g65660

9.5e-36

60.15

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Query:  DFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLHLRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKFIAMPC
        DFSPPH DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLRRS +      D  + S+P K      +++K Q  S+ VLMPGD+ PKFIA+PC
Subjt:  DFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLHLRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKFIAMPC

Query:  PREPPRPEMIEVKVEKPP-----KPLRIAVPFY
        P  PPRPE + V V+ PP     KP R  VP Y
Subjt:  PREPPRPEMIEVKVEKPP-----KPLRIAVPFY

Arabidopsis top hits

e value

%identity

Alignment

AT5G65660.1 hydroxyproline-rich glycoprotein family protein

6.8e-37

60.15

Show/hide

Query:  DFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLHLRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKFIAMPC
        DFSPPH DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLRRS +      D  + S+P K      +++K Q  S+ VLMPGD+ PKFIA+PC
Subjt:  DFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLHLRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKFIAMPC

Query:  PREPPRPEMIEVKVEKPP-----KPLRIAVPFY
        P  PPRPE + V V+ PP     KP R  VP Y
Subjt:  PREPPRPEMIEVKVEKPP-----KPLRIAVPFY

Sequences

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CDS sequence

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ATGGAGAGTCCCGATTTCTCCCCGCCTCACGCCGACGCATCCAGACCCTCCTTAGGGTTTCCCCTTGGCACTGCTCTCCTCCTTCTCGTTATCTTCACCTTGAGTGGAAT
CTTCTCATGCTGCTATCACTGGGACAAACTCAGATCCCTCCGCCGCTCCGCTTCCCAACCCTTACATGATCACGATCTTCATCTCCGATCATCTCCTTCCAAATCTAACC
TTAATTCCCAGGATTTGGAGAAGAATCAGAGAGAGAGCTTGTCGGTGTTGATGCCTGGGGATTCTATTCCGAAGTTCATTGCGATGCCGTGCCCTAGGGAGCCGCCGCGG
CCGGAGATGATTGAGGTGAAAGTGGAGAAGCCGCCGAAGCCGCTGCGGATTGCGGTTCCTTTCTATTAG

mRNA sequence

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CTAAAACCATCTATATGAATTAACACAGCTTATAAGATAGAATCTGGACGCTATGCCTAAGAGAAAGAAAGAAAGAACCGAATCATAATCTTGTTACCATTTTCTACAGA
GATTGAAAGTTAAAACAAACCAAATACCTTTTTCTTGGTCAGTGCAGATTGTTGAGTGGCATAGCACCAAGAGGCAGGTGGGCTCCATATCTTTTTTCCGTACTTAGCTG
TACGCCTGTACCTTTACATATTGTACACATACTTTTCTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCACTTTCCTCTGTTTTCCATTATAAATTCCCCAAATGCTC
CTCCTATTTTCTCATTCCATTCTTCTTTTTTCCTTCCAGATTTAGCCATTGCCATTGGCGTTTTCATCCTTTCCATTCCTTATTCCTTCTCCCAACACATGACTGCAGAT
TCCACATGGAGAGTCCCGATTTCTCCCCGCCTCACGCCGACGCATCCAGACCCTCCTTAGGGTTTCCCCTTGGCACTGCTCTCCTCCTTCTCGTTATCTTCACCTTGAGT
GGAATCTTCTCATGCTGCTATCACTGGGACAAACTCAGATCCCTCCGCCGCTCCGCTTCCCAACCCTTACATGATCACGATCTTCATCTCCGATCATCTCCTTCCAAATC
TAACCTTAATTCCCAGGATTTGGAGAAGAATCAGAGAGAGAGCTTGTCGGTGTTGATGCCTGGGGATTCTATTCCGAAGTTCATTGCGATGCCGTGCCCTAGGGAGCCGC
CGCGGCCGGAGATGATTGAGGTGAAAGTGGAGAAGCCGCCGAAGCCGCTGCGGATTGCGGTTCCTTTCTATTAGCAGATTCAGATTCACCATTGATTGATCTGTGTACAT
AGTAGAAGCAAATGAATTCTTTTCAGTTTCATCTGTTATCTTTCCTTAAGAAGGGGAATTTCAAGGGCTTCGAATTTCATTATGTATATTTTACAACCGTTCGTCACCAG
GTTTCGTCTCTTGCCTCTGGGCAGTTACAAACTTACGGCGGAAAAAAAAAGCATAATTATGAATTTGAAGCAGTTTATTTTATTAATGTTTTGAGAATTTTAATTATCTT
TTAATGTTTAACCAAATGATTTGTGAAAGCTTCCAAAAACAAAACAAAAGTGAAAGCAATTAAAAACAGAGTACTAACTTACTAACCAACCCAATGAATGTCCATTTTTT
TGGGTTAGAAACATTTGGTAATGAAATGGCATTTATCACTC

Protein sequence

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MESPDFSPPHADASRPSLGFPLGTALLLLVIFTLSGIFSCCYHWDKLRSLRRSASQPLHDHDLHLRSSPSKSNLNSQDLEKNQRESLSVLMPGDSIPKFIAMPCPREPPR
PEMIEVKVEKPPKPLRIAVPFY

Lsi01G008330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome