; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G008350 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G008350
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 6, chloroplastic
Genome locationchr01:6660481..6662956
RNA-Seq ExpressionLsi01G008350
SyntenyLsi01G008350
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR042106 - NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QHB76018.1 NADH dehydrogenase subunit 6 [Cucumis melo subsp. melo]1.3e-1097.73Show/hide
Query:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
        ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIG IAVAR
Subjt:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
YP_009317439.1 NADH dehydrogenase subunit 6 [Coccinia grandis]1.3e-1097.73Show/hide
Query:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
        ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIG IAVAR
Subjt:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
YP_009525238.1 NADH-plastoquinone oxidoreductase subunit 6 [Hodgsonia macrocarpa]1.3e-1097.73Show/hide
Query:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
        ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIG IAVAR
Subjt:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
YP_009752547.1 NADH dehydrogenase subunit G [Trichosanthes tubiflora]1.3e-1097.73Show/hide
Query:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
        ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIG IAVAR
Subjt:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
YP_009752972.1 NADH dehydrogenase subunit G [Momordica sessilifolia]1.3e-1097.73Show/hide
Query:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
        ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIG IAVAR
Subjt:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
TrEMBL top hitse value%identityAlignment
A0A1P8LEC8 NADH dehydrogenase subunit 66.1e-1197.73Show/hide
Query:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
        ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIG IAVAR
Subjt:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
A0A1X9Q1H7 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic6.1e-1197.73Show/hide
Query:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
        ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIG IAVAR
Subjt:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
A0A218KG81 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic6.1e-1197.73Show/hide
Query:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
        ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIG IAVAR
Subjt:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
A0A6H0ET31 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic6.1e-1197.73Show/hide
Query:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
        ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIG IAVAR
Subjt:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
A0A6M3S4I4 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic6.1e-1197.73Show/hide
Query:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
        ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIG IAVAR
Subjt:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
SwissProt top hitse value%identityAlignment
A4QKG0 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic1.6e-1137.86Show/hide
Query:  VLICLSL--VLAEPFFLISSDCDLF------------KYGNGKVFDSGVEIFLYHLGISNAITVRGIYSLLSLACIHTLNIERKFTGFI-SIKILIILEQ
        VL+C+SL  +L+   F+ ++   ++             + N   + + + ++    GI++ +    ++SL+S        ++  + G I + ++  ILEQ
Subjt:  VLICLSL--VLAEPFFLISSDCDLF------------KYGNGKVFDSGVEIFLYHLGISNAITVRGIYSLLSLACIHTLNIERKFTGFI-SIKILIILEQ

Query:  DLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
        DLISNSQQIGI+LST FFLPFELISIILL ALIG I++AR
Subjt:  DLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
A7Y3L7 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic7.0e-1238.3Show/hide
Query:  LVLICLSL--VLAEPFFLISSDCDLF------------KYGNGKVFDSGVEIFLYHLGISNAITVRGIYSLLSLACIHTLNIERKFTGFI-SIKILIILE
        LVL+C+SL  +L+  +F+ ++   ++             + NG  + +   ++    GI++ + +    SL+S        ++  + G I + +   I+E
Subjt:  LVLICLSL--VLAEPFFLISSDCDLF------------KYGNGKVFDSGVEIFLYHLGISNAITVRGIYSLLSLACIHTLNIERKFTGFI-SIKILIILE

Query:  QDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
        QDLISNSQQIGI+LST FFLPFELISIILL ALIG I +AR
Subjt:  QDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
B2XWJ4 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic3.1e-1243.26Show/hide
Query:  LVLICLSL--VLAEPFFLISSDCDLF------------KYGNGKVFDSGVEIFLYHLGISNAITVRGIYSLLSLACIHTLNIERKFTGFI-SIKILIILE
        LVL+C+SL  ++A   F+ S+   ++             + NG  +D  + +F    G++  I   GI+ LL    ++T        G I + K+  ILE
Subjt:  LVLICLSL--VLAEPFFLISSDCDLF------------KYGNGKVFDSGVEIFLYHLGISNAITVRGIYSLLSLACIHTLNIERKFTGFI-SIKILIILE

Query:  QDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
        QDLI+NSQQIGI+LST FF PFELISIILL ALIG IAVAR
Subjt:  QDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
Q09MC3 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic1.6e-1138.46Show/hide
Query:  LVLICLSL--VLAEPFFLISSDCDLF------------KYGNGKVFDSGVEIFLYHL--GISNAITVRGIYSLLSLACIHTLNIERKFTGFI-SIKILII
        LVL+C+SL  +L+   F+ ++   ++             + NG  +    ++ L+ +  G+++ +     +SL+      T  ++  + G I + +   I
Subjt:  LVLICLSL--VLAEPFFLISSDCDLF------------KYGNGKVFDSGVEIFLYHL--GISNAITVRGIYSLLSLACIHTLNIERKFTGFI-SIKILII

Query:  LEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
        +EQDLISNSQQIGI+LST FFLPFEL+SIILL ALIG IAVAR
Subjt:  LEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
Q2QD38 NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic1.7e-1397.73Show/hide
Query:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
        ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIG IAVAR
Subjt:  ILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
Arabidopsis top hitse value%identityAlignment
ATCG01080.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 61.9e-1238.57Show/hide
Query:  VLICLSL--VLAEPFFLISSDCDLF------------KYGNGKVFDSGVEIFLYHLGISNAITVRGIYSLLSLACIHTLNIERKFTGFI-SIKILIILEQ
        VL+C+SL  +L+   F+ ++   ++             + N   + +   ++    GI++ +    ++ L+S        ++  + G I + K+  ILEQ
Subjt:  VLICLSL--VLAEPFFLISSDCDLF------------KYGNGKVFDSGVEIFLYHLGISNAITVRGIYSLLSLACIHTLNIERKFTGFI-SIKILIILEQ

Query:  DLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR
        DLISNSQQIGI+LST FFLPFELISIILL ALIG I+VAR
Subjt:  DLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAACACATCAGATGAGAATACTGAAGTGAGCACTAGGGAGAGGGGGGATGTTGATACCTACCCACATACACTACTTTATTATTGCATTATTCATAGACATGATTC
ATGCTCCTTCAACCAATACATTATCAAAACTAAAGTAAAGCTAAAGAATACAGAGCCTAAACCACTCATCATAATTGGTTCCAAAAGTCTGCGCAAATTAAGGAGGCCAT
TACCTCTCCAAAAGGAGCGCACGCCATTGAAATGGCACTTCTTTTTAGTATTGATATGTTTGAGTCTTGTGCTGGCTGAACCCTTCTTCCTGATATCCAGTGATTGTGAT
TTGTTTAAATATGGGAATGGGAAAGTTTTTGACAGTGGAGTCGAAATCTTTCTCTACCATTTAGGCATTTCTAATGCTATAACTGTGCGGGGAATTTATTCTCTATTGTC
ACTTGCATGTATTCATACCCTAAATATAGAAAGGAAGTTTACAGGTTTCATCTCTATTAAAATTTTGATAATTCTAGAGCAAGATTTAATAAGTAATAGTCAACAAATTG
GAATTTATTTATCAACATATTTTTTTCTTCCATTTGAACTCATTTCGATCATTCTTTTAGCTGCTTTGATCGGCACAATTGCCGTGGCTCGT
mRNA sequenceShow/hide mRNA sequence
ATGATGAACACATCAGATGAGAATACTGAAGTGAGCACTAGGGAGAGGGGGGATGTTGATACCTACCCACATACACTACTTTATTATTGCATTATTCATAGACATGATTC
ATGCTCCTTCAACCAATACATTATCAAAACTAAAGTAAAGCTAAAGAATACAGAGCCTAAACCACTCATCATAATTGGTTCCAAAAGTCTGCGCAAATTAAGGAGGCCAT
TACCTCTCCAAAAGGAGCGCACGCCATTGAAATGGCACTTCTTTTTAGTATTGATATGTTTGAGTCTTGTGCTGGCTGAACCCTTCTTCCTGATATCCAGTGATTGTGAT
TTGTTTAAATATGGGAATGGGAAAGTTTTTGACAGTGGAGTCGAAATCTTTCTCTACCATTTAGGCATTTCTAATGCTATAACTGTGCGGGGAATTTATTCTCTATTGTC
ACTTGCATGTATTCATACCCTAAATATAGAAAGGAAGTTTACAGGTTTCATCTCTATTAAAATTTTGATAATTCTAGAGCAAGATTTAATAAGTAATAGTCAACAAATTG
GAATTTATTTATCAACATATTTTTTTCTTCCATTTGAACTCATTTCGATCATTCTTTTAGCTGCTTTGATCGGCACAATTGCCGTGGCTCGT
Protein sequenceShow/hide protein sequence
MMNTSDENTEVSTRERGDVDTYPHTLLYYCIIHRHDSCSFNQYIIKTKVKLKNTEPKPLIIIGSKSLRKLRRPLPLQKERTPLKWHFFLVLICLSLVLAEPFFLISSDCD
LFKYGNGKVFDSGVEIFLYHLGISNAITVRGIYSLLSLACIHTLNIERKFTGFISIKILIILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGTIAVAR