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Lsi01G008560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G008560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationchr01:6852441..6853590
RNA-Seq ExpressionLsi01G008560
SyntenyLsi01G008560
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143420.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis sativus]5.6e-5582.64Show/hide
Query:  MVCECSSNNGVIGSRSR-ILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQV
        M CEC  NNGVIG RSR ILC  VSLLFFLILASTQMRFMAE            GR IS +GKTVNN EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQV
Subjt:  MVCECSSNNGVIGSRSR-ILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQV

Query:  PANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP
        PANPQKS TKNSSTM NIAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  PANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP

XP_008440444.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucumis melo]1.6e-5481.94Show/hide
Query:  MVCECSSNNGVIGSRSR-ILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQV
        M CEC  NNGVIG RSR ILC  VSLLFFLIL STQMRFMAE            GR IS +GKTVNN EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQV
Subjt:  MVCECSSNNGVIGSRSR-ILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQV

Query:  PANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP
        PANPQKS TKNSSTM NIAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  PANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP

XP_022132530.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Momordica charantia]1.6e-4975.35Show/hide
Query:  MVCECSSNNGVIGSRSRILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPA
        M CEC +NNGVIG RSRILC+TV  LF LILASTQMRFMAE            GRL+   G+TV  E+K+VLRGQIGSRPPKCERRCSWCGHCEAIQVP 
Subjt:  MVCECSSNNGVIGSRSRILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPA

Query:  NPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP
        NPQKSA  NSS  NN+AYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP

XP_038882800.1 EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Benincasa hispida]1.4e-5884.51Show/hide
Query:  MVCECSSNNGVIGSRSRILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPA
        M CEC  NNGV+GSRSRILCSTVSLLFFLILASTQMRFMAE            GRLIS +GKTVN+EDK+VLRGQIGSRPPKCERRCSWCGHCEAIQVPA
Subjt:  MVCECSSNNGVIGSRSRILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPA

Query:  NPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP
        NPQKSA KNSSTM NIAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP

XP_038882801.1 EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Benincasa hispida]1.5e-5582.39Show/hide
Query:  MVCECSSNNGVIGSRSRILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPA
        M CEC  NNGV+GSRSRILCSTVSLLFFLILASTQMRFMAE            GRLIS   + VN+EDK+VLRGQIGSRPPKCERRCSWCGHCEAIQVPA
Subjt:  MVCECSSNNGVIGSRSRILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPA

Query:  NPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP
        NPQKSA KNSSTM NIAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP

TrEMBL top hitse value%identityAlignment
A0A0A0KGK0 Epidermal patterning factor-like protein2.7e-5582.64Show/hide
Query:  MVCECSSNNGVIGSRSR-ILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQV
        M CEC  NNGVIG RSR ILC  VSLLFFLILASTQMRFMAE            GR IS +GKTVNN EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQV
Subjt:  MVCECSSNNGVIGSRSR-ILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQV

Query:  PANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP
        PANPQKS TKNSSTM NIAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  PANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP

A0A1S3B1V9 Epidermal patterning factor-like protein7.8e-5581.94Show/hide
Query:  MVCECSSNNGVIGSRSR-ILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQV
        M CEC  NNGVIG RSR ILC  VSLLFFLIL STQMRFMAE            GR IS +GKTVNN EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQV
Subjt:  MVCECSSNNGVIGSRSR-ILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQV

Query:  PANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP
        PANPQKS TKNSSTM NIAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  PANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP

A0A5A7T4J5 Epidermal patterning factor-like protein7.8e-5581.94Show/hide
Query:  MVCECSSNNGVIGSRSR-ILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQV
        M CEC  NNGVIG RSR ILC  VSLLFFLIL STQMRFMAE            GR IS +GKTVNN EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQV
Subjt:  MVCECSSNNGVIGSRSR-ILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNN-EDKMVLRGQIGSRPPKCERRCSWCGHCEAIQV

Query:  PANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP
        PANPQKS TKNSSTM NIAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  PANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP

A0A6J1BSQ3 Epidermal patterning factor-like protein7.6e-5075.35Show/hide
Query:  MVCECSSNNGVIGSRSRILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPA
        M CEC +NNGVIG RSRILC+TV  LF LILASTQMRFMAE            GRL+   G+TV  E+K+VLRGQIGSRPPKCERRCSWCGHCEAIQVP 
Subjt:  MVCECSSNNGVIGSRSRILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPA

Query:  NPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP
        NPQKSA  NSS  NN+AYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP

A0A6J1HJ94 Epidermal patterning factor-like protein2.2e-4978.17Show/hide
Query:  MVCECSSNNGVIGSRSRILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPA
        M CEC +NNGVIG RSRILC+TVS LFFLILASTQMRFMAE            GR IS SGKTV +EDK+VLRGQIGSRPPKCERRCSWC HCEAIQVPA
Subjt:  MVCECSSNNGVIGSRSRILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPA

Query:  NPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP
        NPQK     SS M NIAYARDEASNYKPMSWKCKCGSLIFNP
Subjt:  NPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP

SwissProt top hitse value%identityAlignment
C4B8C4 EPIDERMAL PATTERNING FACTOR-like protein 31.5e-0736.62Show/hide
Query:  NNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKC
        N E+ +  R +IGS+PP CE++C  C  CEAIQ P            T+++I +     +NY+P  W+C C
Subjt:  NNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKC

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 49.4e-0526.32Show/hide
Query:  GVIGSRSRILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKN
        G    R R L + +     L L S      A+G W+ +++    G  + G     N        G  GS PP C  +C  C  C+ + VP  P  S    
Subjt:  GVIGSRSRILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKN

Query:  SSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP
                        Y P +W+CKCG+ +F P
Subjt:  SSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 12.8e-0937.18Show/hide
Query:  RGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM--------NNIAYARDEASNYKPMSWKCKCGSLIFNP
        + ++GS PP C  RC+ C  C AIQVP  P +S     +          +++    D+ SNYKPM WKC C    +NP
Subjt:  RGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM--------NNIAYARDEASNYKPMSWKCKCGSLIFNP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 28.4e-2248.03Show/hide
Query:  LLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCER-RCSWCGHCEAIQVPANPQ-------KSATKNSSTMNNI
        LL  LIL ST    MA G      S  F         K+ + + KM++RG IGSRPP+CER RC  CGHCEAIQVP NPQ        +++ +SS   ++
Subjt:  LLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCER-RCSWCGHCEAIQVPANPQ-------KSATKNSSTMNNI

Query:  AYAR-DEASNYKPMSWKCKCGSLIFNP
         Y R D+++NYKPMSWKCKCG+ I+NP
Subjt:  AYAR-DEASNYKPMSWKCKCGSLIFNP

Arabidopsis top hitse value%identityAlignment
AT3G13898.1 unknown protein1.1e-0836.62Show/hide
Query:  NNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKC
        N E+ +  R +IGS+PP CE++C  C  CEAIQ P            T+++I +     +NY+P  W+C C
Subjt:  NNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKC

AT3G22820.1 allergen-related9.6e-0531.88Show/hide
Query:  GQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP
        G  GS PP C  +C  C  C+A+ VP  P                       Y P +W+CKCG+ +F P
Subjt:  GQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)6.7e-0626.32Show/hide
Query:  GVIGSRSRILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKN
        G    R R L + +     L L S      A+G W+ +++    G  + G     N        G  GS PP C  +C  C  C+ + VP  P  S    
Subjt:  GVIGSRSRILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKN

Query:  SSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP
                        Y P +W+CKCG+ +F P
Subjt:  SSTMNNIAYARDEASNYKPMSWKCKCGSLIFNP

AT4G37810.1 unknown protein6.0e-2348.03Show/hide
Query:  LLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCER-RCSWCGHCEAIQVPANPQ-------KSATKNSSTMNNI
        LL  LIL ST    MA G      S  F         K+ + + KM++RG IGSRPP+CER RC  CGHCEAIQVP NPQ        +++ +SS   ++
Subjt:  LLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCER-RCSWCGHCEAIQVPANPQ-------KSATKNSSTMNNI

Query:  AYAR-DEASNYKPMSWKCKCGSLIFNP
         Y R D+++NYKPMSWKCKCG+ I+NP
Subjt:  AYAR-DEASNYKPMSWKCKCGSLIFNP

AT5G10310.1 unknown protein2.0e-1037.18Show/hide
Query:  RGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM--------NNIAYARDEASNYKPMSWKCKCGSLIFNP
        + ++GS PP C  RC+ C  C AIQVP  P +S     +          +++    D+ SNYKPM WKC C    +NP
Subjt:  RGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNSSTM--------NNIAYARDEASNYKPMSWKCKCGSLIFNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTGTGAGTGTAGTAGCAACAATGGCGTCATTGGCTCGCGCAGCAGAATCTTGTGTTCGACTGTTTCTCTTCTCTTTTTTCTGATTTTGGCATCGACCCAGATGAG
ATTTATGGCTGAAGGTAACTGGTTAAACCGAAAATCGTTTTTCTTTGCAGGCAGATTGATTTCAGGGAGTGGCAAGACAGTGAATAATGAAGATAAAATGGTATTGAGAG
GACAAATTGGGTCAAGACCTCCAAAATGTGAGAGAAGATGCAGCTGGTGTGGACATTGTGAGGCCATCCAAGTTCCAGCAAATCCACAAAAATCAGCAACTAAAAACTCT
TCAACAATGAACAACATAGCTTATGCTAGAGATGAAGCCTCCAATTACAAACCCATGAGCTGGAAATGCAAATGTGGAAGCTTAATCTTCAATCCTTAA
mRNA sequenceShow/hide mRNA sequence
GGAGAATTTCACTGTCTCTTTCACACCCTGCCCTCTCTCTCTCTCTGTGTGTGAGAAGAAAAGGAAAAATGGTGTGTGAGTGTAGTAGCAACAATGGCGTCATTGGCTCG
CGCAGCAGAATCTTGTGTTCGACTGTTTCTCTTCTCTTTTTTCTGATTTTGGCATCGACCCAGATGAGATTTATGGCTGAAGGTAACTGGTTAAACCGAAAATCGTTTTT
CTTTGCAGGCAGATTGATTTCAGGGAGTGGCAAGACAGTGAATAATGAAGATAAAATGGTATTGAGAGGACAAATTGGGTCAAGACCTCCAAAATGTGAGAGAAGATGCA
GCTGGTGTGGACATTGTGAGGCCATCCAAGTTCCAGCAAATCCACAAAAATCAGCAACTAAAAACTCTTCAACAATGAACAACATAGCTTATGCTAGAGATGAAGCCTCC
AATTACAAACCCATGAGCTGGAAATGCAAATGTGGAAGCTTAATCTTCAATCCTTAACTATTTTATATAACCCCCCCTCTCTTAATCTCTTCCTCTGTAAATTAGTGATT
ATATATGATTGTTAATTTCTGTAATTTAACCACTCTGATTTCTCTATCTCTCCCTCTTTTCAATTTGTAGTGCAATTTGATAAGCAGGGCATTAGATAAAGAAGAGTAGT
ATTATGATTGAATTCAACAAATTCCTTCCATATTATTGTTGGTGTTAACTTAGTAAATTGAATCAGAGAGAGAAAGAAAAGGGAAGTGGGTGGTGATTGGAATGGTGCAT
TGCACTGTTTTTGGTGTCCCAAGAAAGAAGAAAAGAAAAGAAAGAGAAGATTATGGTTTAGGAACACTGTTGAGACTGAGACTCAGACTTCACCTATTTGCCTAATTAAT
CCTAATTCCTAATAGACTCTACACACTGCACATCTTTCCCAACCAACTTTCTCTCAAACACATTTTTCCTAGGTGGATTCTCTATG
Protein sequenceShow/hide protein sequence
MVCECSSNNGVIGSRSRILCSTVSLLFFLILASTQMRFMAEGNWLNRKSFFFAGRLISGSGKTVNNEDKMVLRGQIGSRPPKCERRCSWCGHCEAIQVPANPQKSATKNS
STMNNIAYARDEASNYKPMSWKCKCGSLIFNP