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Lsi01G008780 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G008780
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionVQ domain-containing protein
Genome locationchr01:7091243..7091602
RNA-Seq ExpressionLsi01G008780
SyntenyLsi01G008780
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039610 - VQ motif-containing protein 29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647523.1 hypothetical protein Csa_003873 [Cucumis sativus]1.3e-5289.92Show/hide
Query:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK
        M KPWKKPAIAPLPPTRPRVYKVDP+NFR LVQKLTGLAELRSPRLQKMAPPPLDISRR DS SAAVE T+FKAS  +K+ENEAVDGG FLELNLSPFNK
Subjt:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK

Query:  NWCSFPALSPETLAILDAI
        NWCSFPALSPETLAILDAI
Subjt:  NWCSFPALSPETLAILDAI
XP_008440419.1 PREDICTED: uncharacterized protein LOC103484869 [Cucumis melo]1.1e-5390.76Show/hide
Query:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK
        MAKPWKKPAIAPLPPTRPRVYKVDP+NFR LVQKLTGLAELRSPRLQKMAPPPLDISRR D+ SAAVE T+FKASP +K+ENEAVDGG FLELNLSPFNK
Subjt:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK

Query:  NWCSFPALSPETLAILDAI
        NWCSFPALSPETLAILDAI
Subjt:  NWCSFPALSPETLAILDAI
XP_011657908.1 uncharacterized protein LOC105435910 [Cucumis sativus]1.3e-5289.92Show/hide
Query:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK
        M KPWKKPAIAPLPPTRPRVYKVDP+NFR LVQKLTGLAELRSPRLQKMAPPPLDISRR DS SAAVE T+FKAS  +K+ENEAVDGG FLELNLSPFNK
Subjt:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK

Query:  NWCSFPALSPETLAILDAI
        NWCSFPALSPETLAILDAI
Subjt:  NWCSFPALSPETLAILDAI
XP_022977273.1 uncharacterized protein LOC111477640 [Cucurbita maxima]2.0e-4583.19Show/hide
Query:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK
        MAKPWKKPAIAPLPPTRPRVYKVDPLNFR+LVQKLTGLAELRSPRLQKMAPPPLDI+R   S  A VEA+  +   PV+++ EAVDGGSFLELNLSPFNK
Subjt:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK

Query:  NWCSFPALSPETLAILDAI
        NWCSFPALSPE+LAILDAI
Subjt:  NWCSFPALSPETLAILDAI
XP_038883814.1 uncharacterized protein LOC120074676 [Benincasa hispida]9.1e-5997.48Show/hide
Query:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK
        MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRR DSGSAAVEATLFKASPPVK++NEAVDGGSFLELNLSPFNK
Subjt:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK

Query:  NWCSFPALSPETLAILDAI
        NWCSFPALSPETLAILDAI
Subjt:  NWCSFPALSPETLAILDAI
TrEMBL top hitse value%identityAlignment
A0A0A0KJR2 VQ domain-containing protein6.1e-5389.92Show/hide
Query:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK
        M KPWKKPAIAPLPPTRPRVYKVDP+NFR LVQKLTGLAELRSPRLQKMAPPPLDISRR DS SAAVE T+FKAS  +K+ENEAVDGG FLELNLSPFNK
Subjt:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK

Query:  NWCSFPALSPETLAILDAI
        NWCSFPALSPETLAILDAI
Subjt:  NWCSFPALSPETLAILDAI
A0A1S3B142 uncharacterized protein LOC1034848695.6e-5490.76Show/hide
Query:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK
        MAKPWKKPAIAPLPPTRPRVYKVDP+NFR LVQKLTGLAELRSPRLQKMAPPPLDISRR D+ SAAVE T+FKASP +K+ENEAVDGG FLELNLSPFNK
Subjt:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK

Query:  NWCSFPALSPETLAILDAI
        NWCSFPALSPETLAILDAI
Subjt:  NWCSFPALSPETLAILDAI
A0A6J1GE45 uncharacterized protein LOC1114533301.6e-4582.35Show/hide
Query:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK
        MAKPWKKPAIAPLPPTRPRVYKVDPLNFR+LVQKLTGLAELRSPRLQKMAPPPLDI+R   S  A VEA+  +   PV+++ EAVDGGSFLELNLSPFNK
Subjt:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK

Query:  NWCSFPALSPETLAILDAI
        NWCSFPALSPE+LA+LDAI
Subjt:  NWCSFPALSPETLAILDAI
A0A6J1HHA9 uncharacterized protein LOC1114634797.1e-4178.15Show/hide
Query:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK
        ++KPWKKPAIAPLPPTRPRVYKVD L F+DLVQKLTGL EL SPRLQKMAPPPL I+ R  SG AAVEAT F    PVK++ EA DGGSFLELNLSPFNK
Subjt:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK

Query:  NWCSFPALSPETLAILDAI
        NW SFPALSP +LAI DAI
Subjt:  NWCSFPALSPETLAILDAI
A0A6J1IPH4 uncharacterized protein LOC1114776409.5e-4683.19Show/hide
Query:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK
        MAKPWKKPAIAPLPPTRPRVYKVDPLNFR+LVQKLTGLAELRSPRLQKMAPPPLDI+R   S  A VEA+  +   PV+++ EAVDGGSFLELNLSPFNK
Subjt:  MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNK

Query:  NWCSFPALSPETLAILDAI
        NWCSFPALSPE+LAILDAI
Subjt:  NWCSFPALSPETLAILDAI
SwissProt top hitse value%identityAlignment
Q9SZG3 VQ motif-containing protein 291.0e-0457.5Show/hide
Query:  AKPWKKPAI-APLPPTRPRVYKVDPLNFRDLVQKLTGLAE
        +KP K+PAI +PL P  P VY+V+P+NF+ LVQ+LTG  E
Subjt:  AKPWKKPAI-APLPPTRPRVYKVDPLNFRDLVQKLTGLAE
Arabidopsis top hitse value%identityAlignment
AT2G22880.1 VQ motif-containing protein2.5e-0640Show/hide
Query:  AKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASP
        AKPWKKP         P+VY+V+P+NF++LVQ+LTG AE     + ++   P+ IS   D+ +A      F  SP
Subjt:  AKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASP
AT4G37710.1 VQ motif-containing protein7.3e-0657.5Show/hide
Query:  AKPWKKPAI-APLPPTRPRVYKVDPLNFRDLVQKLTGLAE
        +KP K+PAI +PL P  P VY+V+P+NF+ LVQ+LTG  E
Subjt:  AKPWKKPAI-APLPPTRPRVYKVDPLNFRDLVQKLTGLAE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGCCGTGGAAGAAGCCGGCGATTGCTCCACTCCCACCGACTCGGCCCAGGGTTTACAAAGTCGACCCACTTAACTTTCGGGATTTGGTTCAGAAGCTCACTGG
CTTGGCTGAGCTCCGATCTCCACGCCTTCAAAAAATGGCGCCACCACCGCTTGATATCTCCCGCCGCCTAGACTCGGGTTCCGCCGCCGTGGAAGCCACTCTATTTAAGG
CTTCGCCGCCTGTGAAGATGGAAAATGAGGCGGTGGATGGTGGCAGCTTTCTTGAACTGAATTTGTCGCCCTTCAACAAAAATTGGTGCTCTTTCCCTGCTTTGAGCCCT
GAAACTCTTGCCATTTTGGATGCAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGCCGTGGAAGAAGCCGGCGATTGCTCCACTCCCACCGACTCGGCCCAGGGTTTACAAAGTCGACCCACTTAACTTTCGGGATTTGGTTCAGAAGCTCACTGG
CTTGGCTGAGCTCCGATCTCCACGCCTTCAAAAAATGGCGCCACCACCGCTTGATATCTCCCGCCGCCTAGACTCGGGTTCCGCCGCCGTGGAAGCCACTCTATTTAAGG
CTTCGCCGCCTGTGAAGATGGAAAATGAGGCGGTGGATGGTGGCAGCTTTCTTGAACTGAATTTGTCGCCCTTCAACAAAAATTGGTGCTCTTTCCCTGCTTTGAGCCCT
GAAACTCTTGCCATTTTGGATGCAATTTAG
Protein sequenceShow/hide protein sequence
MAKPWKKPAIAPLPPTRPRVYKVDPLNFRDLVQKLTGLAELRSPRLQKMAPPPLDISRRLDSGSAAVEATLFKASPPVKMENEAVDGGSFLELNLSPFNKNWCSFPALSP
ETLAILDAI