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Lsi01G008870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G008870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
Genome locationchr01:7157403..7162621
RNA-Seq ExpressionLsi01G008870
SyntenyLsi01G008870
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0016651 - oxidoreductase activity, acting on NAD(P)H (molecular function)
InterPro domainsIPR006885 - NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial
IPR038532 - NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132610.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Momordica charantia]4.2e-7791.61Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW      RG LAPLCRSF+ DSLVQVKPGEIGMV+GIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA
        VGDSALSFDSEEAAKAFAEKHGW+YVVKKRHTPLLKVKAYADNFKWKGPPEA EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA

XP_022950018.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita moschata]8.8e-7588.39Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW      RG +APLCRSF++DSLVQ+KPGEIGMV+GIP+EHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA
        VGDSALSFDSEEAAK FA+KHGWEYVVKKRHTPLLKVKAYADNFKWKG PEA EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA

XP_022962977.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita moschata]4.7e-7689.68Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW +G   RG +APLCRSF+ DSLV+VKPGEIGMV+GIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA
        VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLK KAYADNFKWKG PE  EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA

XP_022977437.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Cucurbita maxima]6.7e-7588.39Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW      RG +APLCRSF++DSLVQ+KPGEIGMV+GIP+EHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA
        VGDSALSFDSEEAAK FA+KHGWEYVVKKRHTPLLKVKAYADNFKWKG PEA EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA

XP_038881462.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial [Benincasa hispida]3.8e-7891.61Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW  G   RG +APLCRSF+TDSLVQVKPGEIGMV+GIPEEHLTRRV+IYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA
        VGDSALSFDSEEAAKAFAEKHGWEYVV+KRHTPLLKVKAYADNFKWKGPPEA EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA

TrEMBL top hitse value%identityAlignment
A0A6J1BSY3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial2.0e-7791.61Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW      RG LAPLCRSF+ DSLVQVKPGEIGMV+GIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA
        VGDSALSFDSEEAAKAFAEKHGW+YVVKKRHTPLLKVKAYADNFKWKGPPEA EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA

A0A6J1GDQ9 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial4.2e-7588.39Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW      RG +APLCRSF++DSLVQ+KPGEIGMV+GIP+EHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA
        VGDSALSFDSEEAAK FA+KHGWEYVVKKRHTPLLKVKAYADNFKWKG PEA EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA

A0A6J1HE01 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial2.3e-7689.68Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW +G   RG +APLCRSF+ DSLV+VKPGEIGMV+GIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA
        VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLK KAYADNFKWKG PE  EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA

A0A6J1IIF4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial3.3e-7588.39Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW      RG +APLCRSF++DSLVQ+KPGEIGMV+GIP+EHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA
        VGDSALSFDSEEAAK FA+KHGWEYVVKKRHTPLLKVKAYADNFKWKG PEA EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA

A0A6J1KR46 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial2.3e-7689.68Show/hide
Query:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH
        MANSLQRIW +G   RG +APLCRSF+ DSLV+VKPGEIGMV+GIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYA+
Subjt:  MANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAH

Query:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA
        VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLK KAYADNFKWKG PE  EA
Subjt:  VGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA

SwissProt top hitse value%identityAlignment
Q02375 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial3.6e-2346.36Show/hide
Query:  EIGMVAGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLK
        +I  + G+PEEH+ TR+  I+ PAR   Q G     KWK+ F + ++WENPLMGW ST DP +++    L+F ++E A AFAEK+GW Y V++R  P  K
Subjt:  EIGMVAGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLK

Query:  VKAYADNFKW
         K+Y  NF W
Subjt:  VKAYADNFKW

Q0MQH0 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial6.2e-2345.45Show/hide
Query:  EIGMVAGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLK
        +I  + G+PEEH+ TR+V I+ PAR   Q G     KWK+ F + ++WENPLMGW ST DP +++    L+F ++E A +FAEK+GW Y +++R  P  K
Subjt:  EIGMVAGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLK

Query:  VKAYADNFKW
         K+Y  NF W
Subjt:  VKAYADNFKW

Q5XIF3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial1.2e-2347.27Show/hide
Query:  EIGMVAGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLK
        ++  + G+PEEH+ TR+V I+ PAR   Q G     KWK+ F + ++WENPLMGW ST DP +++    L+F ++E A AFAEKHGW Y V+ R  P  K
Subjt:  EIGMVAGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLK

Query:  VKAYADNFKW
         K+Y  NF W
Subjt:  VKAYADNFKW

Q66XS7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial4.7e-2346.36Show/hide
Query:  EIGMVAGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLK
        +I  + G+PEEH+ TR+V I+ PAR   Q G     KWK+ F + ++WENPLMGW+ST DP +++    L+F ++E A AFAEK+GW + V++R  P  K
Subjt:  EIGMVAGIPEEHL-TRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLK

Query:  VKAYADNFKW
         K+Y  NF W
Subjt:  VKAYADNFKW

Q9FJW4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial5.6e-5674.81Show/hide
Query:  LAPLCRSFATDSLVQ--VKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKA
        L  + R FATD++V+   K GEIG V+GIPEEHL+R+V+IYSPARTA+Q GSGK+GKWKINF+ST KWENPLMGWTSTGDPYA+VGDSAL+FDSEEAAK+
Subjt:  LAPLCRSFATDSLVQ--VKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKA

Query:  FAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPE
        FAE+HGW+Y VKK +TPLLKVK+Y+DNFKWKG P+
Subjt:  FAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPE

Arabidopsis top hitse value%identityAlignment
AT5G67590.1 NADH-ubiquinone oxidoreductase-related3.9e-5774.81Show/hide
Query:  LAPLCRSFATDSLVQ--VKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKA
        L  + R FATD++V+   K GEIG V+GIPEEHL+R+V+IYSPARTA+Q GSGK+GKWKINF+ST KWENPLMGWTSTGDPYA+VGDSAL+FDSEEAAK+
Subjt:  LAPLCRSFATDSLVQ--VKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGSGKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKA

Query:  FAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPE
        FAE+HGW+Y VKK +TPLLKVK+Y+DNFKWKG P+
Subjt:  FAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAAACAAGAGCGTAAATCTCTTCTCCGTCGTTCGAAGTACAATCGAGTTGGAAGTGTGTTTGTAACGTGGGACGAGGCTGACGGAAAACTAGTTTTTGCGTCGAA
TTTTCTTCATCGACGGATGGCTAACTCCTTGCAGCGAATCTGGAGACAGGGATATACTCGCCGTGGTAATCTGGCTCCTCTCTGCAGGTCATTCGCTACCGATTCCTTGG
TTCAAGTCAAGCCCGGCGAGATCGGTATGGTCGCTGGAATTCCAGAGGAACACCTTACCAGAAGGGTTGTAATTTACTCTCCAGCTAGAACTGCATCCCAACAAGGATCA
GGCAAGGTTGGCAAGTGGAAAATCAATTTTATGTCAACACAAAAGTGGGAAAACCCATTGATGGGGTGGACTTCAACTGGGGACCCCTATGCCCATGTAGGGGATTCTGC
ACTGTCTTTTGATAGTGAAGAAGCTGCAAAGGCATTTGCTGAGAAACATGGATGGGAATATGTGGTTAAGAAGCGCCACACACCACTTTTGAAGGTGAAGGCATATGCGG
ACAATTTCAAATGGAAGGGCCCTCCTGAAGCCAACGAGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAAAACAAGAGCGTAAATCTCTTCTCCGTCGTTCGAAGTACAATCGAGTTGGAAGTGTGTTTGTAACGTGGGACGAGGCTGACGGAAAACTAGTTTTTGCGTCGAA
TTTTCTTCATCGACGGATGGCTAACTCCTTGCAGCGAATCTGGAGACAGGGATATACTCGCCGTGGTAATCTGGCTCCTCTCTGCAGGTCATTCGCTACCGATTCCTTGG
TTCAAGTCAAGCCCGGCGAGATCGGTATGGTCGCTGGAATTCCAGAGGAACACCTTACCAGAAGGGTTGTAATTTACTCTCCAGCTAGAACTGCATCCCAACAAGGATCA
GGCAAGGTTGGCAAGTGGAAAATCAATTTTATGTCAACACAAAAGTGGGAAAACCCATTGATGGGGTGGACTTCAACTGGGGACCCCTATGCCCATGTAGGGGATTCTGC
ACTGTCTTTTGATAGTGAAGAAGCTGCAAAGGCATTTGCTGAGAAACATGGATGGGAATATGTGGTTAAGAAGCGCCACACACCACTTTTGAAGGTGAAGGCATATGCGG
ACAATTTCAAATGGAAGGGCCCTCCTGAAGCCAACGAGGCTTAAACCTTGTTCGACACTCTTTTCTCATCTAATTGGAGGCGGAACAGACCGGAGGATTTGTGTAGTCCA
CTTTGTTGCTTATTTTTGAGGAAGTTGGTGATAATAAGTGAGAATCGTGCTGTATACTCACTTGACCTTGTAACTTTTGTTCTCTCTTTACGTTACCGTTACAGAACGTC
GAATGAAGTTCGTATGCATTTGAAGCACCCATCTCGATTAACAAACGAGCATAGGAATTGATAAGTTGATTGTTTTGTGCAATGAAGGAGAATCTTTAGTAATAGAGTTG
CATGATTCCATAAACGTTATTTAAATCAGTGCTGATCAACAAAGTCGATGGATCATGTGCAAAATATTATCAAGAGCACGGCTGTATCTCGGGAGTGTTGACATTTTTCT
GCTTCGGATGAGGGGTTTGTAGGTGGTTGTTTGTCTGTCAGTCGGTGTTGGTTTCGAGAAAAAAAAAATTGACAGTTGAATAGGGCAGTCAGCCACCGACTGAACTGACC
GAACCGATCAGTTTTTTATTTGTTTAAAAAAAAAAATAGTGGGGAGAGGACAGAGATGGCCGTGGTTTTCTCTCCATGACTCCCTCTAGCAGGACACTGAGAAAATACCA
GTGGATGAACAATCAATACATTTACAAAGTTTAGACTTCAAATTGA
Protein sequenceShow/hide protein sequence
MIKQERKSLLRRSKYNRVGSVFVTWDEADGKLVFASNFLHRRMANSLQRIWRQGYTRRGNLAPLCRSFATDSLVQVKPGEIGMVAGIPEEHLTRRVVIYSPARTASQQGS
GKVGKWKINFMSTQKWENPLMGWTSTGDPYAHVGDSALSFDSEEAAKAFAEKHGWEYVVKKRHTPLLKVKAYADNFKWKGPPEANEA