; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G008930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G008930
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description60S ribosomal protein L26
Genome locationchr01:7195504..7195944
RNA-Seq ExpressionLsi01G008930
SyntenyLsi01G008930
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141862.1 60S ribosomal protein L26-1 [Cucumis sativus]9.7e-7199.32Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKG+EGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

XP_022132426.1 60S ribosomal protein L26-1 [Momordica charantia]1.2e-6895.89Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRK+RKAHFSAPSSVRRVIMS+PLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKG+EGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRK KGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

XP_022950899.1 60S ribosomal protein L26-1 [Cucurbita moschata]2.4e-6996.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKG+EGKVVQVYR+KW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAA+DKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

XP_022963400.1 60S ribosomal protein L26-1-like [Cucurbita moschata]5.3e-6996.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLS DLRSKYNVRSMPIRKDDEVQVVRGTYKG+EGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKF+AEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

XP_038880918.1 60S ribosomal protein L26-1 [Benincasa hispida]8.2e-7097.26Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHF+APSSVRRVIMSAPLS+DLRSKYNVRSMPIRKDDEVQVVRGTYKG+EGKVVQVYRRKW+IHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

TrEMBL top hitse value%identityAlignment
A0A0A0KGI0 KOW domain-containing protein4.7e-7199.32Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKG+EGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

A0A1S3B106 60S ribosomal protein L26-14.7e-7199.32Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKG+EGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

A0A5D3CR35 Ribosomal protein L26/L24P, eukaryotic/archaeal4.7e-7199.32Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKG+EGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

A0A6J1GH60 60S ribosomal protein L26-11.2e-6996.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKG+EGKVVQVYR+KW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAA+DKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

A0A6J1INB1 60S ribosomal protein L26-11.2e-6996.58Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKG+EGKVVQVYR+KW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLLDRKGKGRAA+DKDKGTKFTAEDIMQSVD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

SwissProt top hitse value%identityAlignment
P12749 60S ribosomal protein L269.5e-4568.31Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK
        MK+NP V+S R K+RK HF+APS +RR IMS+PLS +LR KYNVRSMPIRKDDEVQVVRG YKGQ+ GKVVQVYR+K++I+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK

Query:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI
        PSKVVIT+L+LDKDRK +L+RK K R    K+KG K+  E I
Subjt:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI

P51414 60S ribosomal protein L26-11.2e-6687.67Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRRK+RKAHF+A SS RRVIMS+PLSTDLR KYNVRSMPIRKDDEVQ+VRGTYKG+EGKVVQVYRRKW+IHIERITREKVNG+TVNVGI+P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLL+RK KGRAAADK+KGTKFT+ED+MQ+VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

P61257 60S ribosomal protein L262.1e-4468.31Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK
        MK+NP V+S R K+RK HF+APS +RR IMS+PLS +LR KYNVRSMPIRKDDEVQVVRG YKGQ+ GKVVQVYR+K++I+IER+ REK NG+TV+VGI 
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIK

Query:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI
        PSKVVIT+L+LDKDRK +L+RK K R    K+KG K+  E I
Subjt:  PSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDI

Q39411 60S ribosomal protein L265.6e-6181.38Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRR++RK HF+A SS RRV MS+PLSTDLR KYNVRSMPIRKDDE Q+VRGTYKG+EGK+ QVYRRK +IHIER+TREKVNG+TVNVG++P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSV
        +KVVITKLRLDKDRKSLL+RK KGRAAADKDKGTKFTA D+MQ+V
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSV

Q9FJX2 60S ribosomal protein L26-22.7e-6382.88Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MK+NPRVSSSRRK+RKAHF+APSSVRRV+MS+PLS DLR+K+NVRSMPIRKDDEVQVVRGT+KG+EGKV+QVYRRKW+IHIERITREKVNGSTVNVG+  
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        S V+ITKLRLDKDRKSLL+RK  GRAAADK+KGTKF+AED+M++VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

Arabidopsis top hitse value%identityAlignment
AT3G49910.1 Translation protein SH3-like family protein8.2e-6887.67Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MKYNPRV+SSRRK+RKAHF+A SS RRVIMS+PLSTDLR KYNVRSMPIRKDDEVQ+VRGTYKG+EGKVVQVYRRKW+IHIERITREKVNG+TVNVGI+P
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        SKVVITKLRLDKDRKSLL+RK KGRAAADK+KGTKFT+ED+MQ+VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD

AT5G67510.1 Translation protein SH3-like family protein1.9e-6482.88Show/hide
Query:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP
        MK+NPRVSSSRRK+RKAHF+APSSVRRV+MS+PLS DLR+K+NVRSMPIRKDDEVQVVRGT+KG+EGKV+QVYRRKW+IHIERITREKVNGSTVNVG+  
Subjt:  MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKP

Query:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
        S V+ITKLRLDKDRKSLL+RK  GRAAADK+KGTKF+AED+M++VD
Subjt:  SKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTACAATCCTAGGGTTTCCAGTTCCCGCCGCAAGAGCCGCAAGGCTCATTTTTCGGCCCCGTCGAGCGTTCGTCGGGTTATTATGAGTGCTCCTCTCTCGACTGA
CCTCCGGTCAAAGTACAACGTCCGATCTATGCCGATTCGGAAGGATGATGAGGTCCAAGTCGTCCGTGGAACTTACAAGGGCCAGGAGGGTAAGGTAGTGCAGGTGTATC
GTAGGAAGTGGATTATCCACATCGAGCGCATCACCCGCGAAAAGGTTAACGGTTCCACTGTCAACGTCGGTATCAAACCTTCGAAGGTCGTGATTACAAAGCTCAGGCTG
GACAAGGACCGTAAGTCACTTCTGGATCGTAAAGGCAAGGGCCGTGCCGCCGCCGACAAGGACAAGGGTACCAAGTTCACAGCAGAGGATATCATGCAGAGCGTCGATTA
A
mRNA sequenceShow/hide mRNA sequence
ATGAAGTACAATCCTAGGGTTTCCAGTTCCCGCCGCAAGAGCCGCAAGGCTCATTTTTCGGCCCCGTCGAGCGTTCGTCGGGTTATTATGAGTGCTCCTCTCTCGACTGA
CCTCCGGTCAAAGTACAACGTCCGATCTATGCCGATTCGGAAGGATGATGAGGTCCAAGTCGTCCGTGGAACTTACAAGGGCCAGGAGGGTAAGGTAGTGCAGGTGTATC
GTAGGAAGTGGATTATCCACATCGAGCGCATCACCCGCGAAAAGGTTAACGGTTCCACTGTCAACGTCGGTATCAAACCTTCGAAGGTCGTGATTACAAAGCTCAGGCTG
GACAAGGACCGTAAGTCACTTCTGGATCGTAAAGGCAAGGGCCGTGCCGCCGCCGACAAGGACAAGGGTACCAAGTTCACAGCAGAGGATATCATGCAGAGCGTCGATTA
A
Protein sequenceShow/hide protein sequence
MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGQEGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRL
DKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD