; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G009130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G009130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibonuclease III domain containing protein
Genome locationchr01:7398539..7402265
RNA-Seq ExpressionLsi01G009130
SyntenyLsi01G009130
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0016075 - rRNA catabolic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003725 - double-stranded RNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
InterPro domainsIPR000999 - Ribonuclease III domain
IPR011907 - Ribonuclease III
IPR036389 - Ribonuclease III, endonuclease domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141878.1 ribonuclease III domain-containing protein RNC1, chloroplastic isoform X1 [Cucumis sativus]9.0e-28884.77Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA
        MELSSSFVKLSSPS NYSFSSSLTPFIVKIH NH IFPNPSS+NLR+FAVA+DPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDK+LA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRL FLGQYV+
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF
        ELALAEYFLQRYPRESPGPMRERVFALIGKRNLP+WIKAASLQNLIFPYDDMDK+IRKDREPPVK     +  A                          
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF

Query:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP
              +  C+                            EVYRVLFEVFGMDPDA+ECEPRLRRQLEDVDYVSVEFEDKRI WQDMVSYKPPEDALFAHP
Subjt:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP

Query:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
        RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
Subjt:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD

Query:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
        APG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRR+MFEVFDFEQIQPKAV
Subjt:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV

XP_008440359.1 PREDICTED: ribonuclease III domain-containing protein RNC1, chloroplastic [Cucumis melo]2.7e-29286.13Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA
        MELSSSFVKLSSPSPNYSFSSSLTPFIVKIH NH IFPNPSS NLRIFAVA+DPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF
        ELALAEYFL RYPRESPGPMRERVFALIGKRNLP+WIKAASLQNLIFPYDDMDKMIRKDREPPVK     +  A                          
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF

Query:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP
              +  C+                            EVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDM+SYKPPEDALFAHP
Subjt:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP

Query:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
        RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PV DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
Subjt:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD

Query:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
        APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
Subjt:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV

XP_022133289.1 ribonuclease III domain-containing protein RNC1, chloroplastic [Momordica charantia]5.0e-28683.93Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA
        MELSSSFV+L+SP+PNYSFSSSLTPF  KI+ N+  FPNP+S NLRIFAVA+DPQQELPKNNPQRLLKELAERKRATSPKK+VPPRRFILRPPLDDKKLA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSD+YGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYV+
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF
        ELALAEYFLQRYPRESPGPMRERVFALIGKR+LP+WIKAASLQNLIFPYDDMDKMIRKDREPPVK     +  A                          
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF

Query:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP
              +  C+                            EVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDK+ISWQDMV+YKPPEDALFAHP
Subjt:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP

Query:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
        RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PV+DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
Subjt:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD

Query:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
        APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Subjt:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV

XP_023543359.1 ribonuclease III domain-containing protein RNC1, chloroplastic-like [Cucurbita pepo subsp. pepo]5.0e-28683.93Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA
        MELSS FVKLSSP+PN+SFSSSLTPF+VKIH N+    NPSS +LRIFAVA+DPQQELPKNNPQRLLKEL ERKRATSPKKKVPPRRFILRPPLDDKKLA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF
        ELALAEYFLQRYPRESPGPMRERVFALIGKRNLP+WIKAASLQNLIFPYDDMDKM+RKDREPPVK     +  A                          
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF

Query:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP
              +  C+                            EVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDK+ISWQDMV+YKPPEDALFAHP
Subjt:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP

Query:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
        RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PVTDKIP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
Subjt:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD

Query:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
        APGKWLQEKHRRLLMNKFCGRYLREKYLHKLI+YSE+VQDAYENNRRLRNPATTAVQQALHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Subjt:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV

XP_038883471.1 ribonuclease III domain-containing protein RNC1, chloroplastic [Benincasa hispida]6.5e-29486.63Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA
        MELSSSFVKLSSPSPNYSFSSSLTPFIVKIH NH IFPNPSS+NLRIFAVA+DPQQELPKNNPQRLLKELAERKRATSPKKKVPP+RFILRPPLDDKKLA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF
        ELALAEYFLQRYPRESPGPMRERVFALIGKRNLP+WIKAASLQNLIFPYDDMDKMIRKDREPPVK     +  A                          
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF

Query:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP
              +  C+                            EVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP
Subjt:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP

Query:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
        RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
Subjt:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD

Query:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
        APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
Subjt:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV

TrEMBL top hitse value%identityAlignment
A0A0A0KGG7 RNase III domain-containing protein4.4e-28884.77Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA
        MELSSSFVKLSSPS NYSFSSSLTPFIVKIH NH IFPNPSS+NLR+FAVA+DPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDK+LA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRL FLGQYV+
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF
        ELALAEYFLQRYPRESPGPMRERVFALIGKRNLP+WIKAASLQNLIFPYDDMDK+IRKDREPPVK     +  A                          
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF

Query:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP
              +  C+                            EVYRVLFEVFGMDPDA+ECEPRLRRQLEDVDYVSVEFEDKRI WQDMVSYKPPEDALFAHP
Subjt:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP

Query:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
        RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
Subjt:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD

Query:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
        APG+WLQ KHRRLLMNKFCGRYLRE+YLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRR+MFEVFDFEQIQPKAV
Subjt:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV

A0A1S3B1J9 ribonuclease III domain-containing protein RNC1, chloroplastic1.3e-29286.13Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA
        MELSSSFVKLSSPSPNYSFSSSLTPFIVKIH NH IFPNPSS NLRIFAVA+DPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPL+PSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF
        ELALAEYFL RYPRESPGPMRERVFALIGKRNLP+WIKAASLQNLIFPYDDMDKMIRKDREPPVK     +  A                          
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF

Query:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP
              +  C+                            EVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDM+SYKPPEDALFAHP
Subjt:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP

Query:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
        RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PV DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
Subjt:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD

Query:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
        APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
Subjt:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV

A0A6J1BVK6 ribonuclease III domain-containing protein RNC1, chloroplastic2.4e-28683.93Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA
        MELSSSFV+L+SP+PNYSFSSSLTPF  KI+ N+  FPNP+S NLRIFAVA+DPQQELPKNNPQRLLKELAERKRATSPKK+VPPRRFILRPPLDDKKLA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSD+YGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYV+
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF
        ELALAEYFLQRYPRESPGPMRERVFALIGKR+LP+WIKAASLQNLIFPYDDMDKMIRKDREPPVK     +  A                          
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF

Query:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP
              +  C+                            EVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDK+ISWQDMV+YKPPEDALFAHP
Subjt:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP

Query:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
        RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PV+DKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
Subjt:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD

Query:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
        APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Subjt:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV

A0A6J1GEC3 ribonuclease III domain-containing protein RNC1, chloroplastic-like3.1e-28683.93Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA
        MELSS FVKLSSP+PN+SFSSSLTPF+VKIH N+    NPSS  LRIFAVA+DPQQELPKNNPQRLLKEL ERKRATSPKKKVPPRRFILRPPLDDKKLA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF
        ELALAEYFLQRYPRESPGPMRERVFALIGKRNLP+WIKAASLQNLIFPYDDMDKM+RKDREPPVK     +  A                          
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF

Query:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP
              +  C+                            EVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDK+ISWQDMV+YKPPEDALFAHP
Subjt:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP

Query:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
        RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PVTDKIP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
Subjt:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD

Query:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
        APGKWLQEKHRRLLMNKFCGRYLREKYLHKLI+YSE+VQDAYENNRRLRNPATTAVQQALHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Subjt:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV

A0A6J1IRK8 ribonuclease III domain-containing protein RNC1, chloroplastic-like2.2e-28483.25Show/hide
Query:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA
        MELSS FVKLSSP+PN+SFSSSLTPF+VKIH N+    NPSS +LRIFAVA+DP+QELPKNNPQRLLKEL ERKRATSPKKKVPPRRFILRPPLDDKKLA
Subjt:  MELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLA

Query:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
        ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWM+EYLLEAKQALGYPLEP DSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI
Subjt:  ERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVI

Query:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF
        ELALAEYFLQRYPRESPGPMRERVFALIGKRNLP+WIKAASLQNLIFPYDDMDKM+RKDREPPVK     +  A                          
Subjt:  ELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHF

Query:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP
              +  C+                            EVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDK+ISWQDMV+YKPPEDALFAHP
Subjt:  VKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHP

Query:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
        RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYP+PVTDKIP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD
Subjt:  RLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLD

Query:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
        APGKWLQEKHRRLLMNKFCGRYLREKYLHKLI+YSE+VQDAYENNRRLRNPATTAVQQ+LHGLSY VYGKPDVRRLMFEVFDFEQIQPKAV
Subjt:  APGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV

SwissProt top hitse value%identityAlignment
A6YSL1 Ribonuclease III domain-containing protein RNC1, chloroplastic8.4e-22065.86Show/hide
Query:  SLTPFIVKIHLNHAIFPNPSSSNLRIFAVAID------PQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFP
        +LTP    +H         SS  +R+ AVA D      P  E P N+P RLL+ELA+RK+A SPKKK PPRRFIL+PPLDD++L  RFL+SPQL+LK+ P
Subjt:  SLTPFIVKIHLNHAIFPNPSSSNLRIFAVAID------PQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFP

Query:  LLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSY--GDDNPAKQFDTLLYLAFQH--PSCERTKARHIRSGHSRLLFLGQYVIELALAEYFLQR
        LLSSCLPS+ L+ AD+TWMDEYLLEAKQALGYPL PS++   GDD PA+ FD L YLAFQH  PS ERT+ RH+R+GHSRL FLGQYV+ELA  E+FLQR
Subjt:  LLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSY--GDDNPAKQFDTLLYLAFQH--PSCERTKARHIRSGHSRLLFLGQYVIELALAEYFLQR

Query:  YPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHFVKMMLRVNSCY
        YPRESPGPMRERVFALIGK+ LPRW+KAASL NL+FPYDD+DKMIRKDREPP K     I  A                                +  C+
Subjt:  YPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHFVKMMLRVNSCY

Query:  QYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHPRLFRACVPPGM
                                    EVYRVLFE FGMDPD E C+P+LRRQLEDVDYVSVEFE ++++WQD+ +Y+PP DALFAHPRLFRACVPPGM
Subjt:  QYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHPRLFRACVPPGM

Query:  HRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHR
        HRFRGNIWD+DSRP+VM  LGYP+P+ D+IP+ITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEY+GQKIQD+VMAERLLMKHLDAPG+WL EKHR
Subjt:  HRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHR

Query:  RLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
        R LMNK+CGRYLR+K+L   IIY E VQD +E+NRRLRNP+TT+VQQALHGL+Y VYGKPDVRRLMFEVFDFEQ+QPKAV
Subjt:  RLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV

Q1DKI1 Dicer-like protein 14.7e-0525.55Show/hide
Query:  NIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRF--------CYERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQE
        N+ +++   ++     Y   V D   ++  A  ++  LG    +    +  F HP +        CY+RLE+LG  + D+   E +  KH D   +WL E
Subjt:  NIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRF--------CYERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQE

Query:  KHRRLLMNKFCGRYLREKYLHK-LIIYSEKVQDAYEN
            ++ NKF G       LH  L  +S  +Q    N
Subjt:  KHRRLLMNKFCGRYLREKYLHK-LIIYSEKVQDAYEN

Q5L0Q3 Ribonuclease 36.2e-0530.49Show/hide
Query:  DTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLI
        + LL  AF H S      R +   + RL FLG  V+EL +++Y  Q++P  S G + +   A++ + +L ++  A S   L+
Subjt:  DTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLI

Q8S1Z0 Ribonuclease III domain-containing protein RNC1, chloroplastic4.2e-21968.46Show/hide
Query:  PKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDD
        P N+P RLL+ELAERK+A SPKKK PPRRFIL+PPLDD++L +RFL+SPQL+LK+ PLLSSCLPS+ L+ AD+TWMDEYLLEAKQALGYPL PS++ GD 
Subjt:  PKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDD

Query:  N----PAKQFDTLLYLAFQH--PSCERTKARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDM
        +    PA+ FD LLYLAFQH   SCERT+ RH+RSGHSRL FLGQYV+ELA  E+FLQRYPRESPGPMRERVFALIGKR +P+WIKAASL NL+FPYDD+
Subjt:  N----PAKQFDTLLYLAFQH--PSCERTKARHIRSGHSRLLFLGQYVIELALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDM

Query:  DKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHFVKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMD
        DKMIRKDREPP K     +  A                                +  C+                            EVYRVLFE FGMD
Subjt:  DKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHFVKMMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMD

Query:  PDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIEL
        P+ E C+P+LRRQLEDVDYVSVEFE ++++WQD+ +Y+PP DALFAHPRLFRACVPPGMHRFRGNIWD+D+RP+VM  LGYP+P+ D+IP+ITEARNIEL
Subjt:  PDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIEL

Query:  GLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPA
        GLGLQLCFLHPSKHKFEHPRFC ERLEY+GQKIQD+VMAERLLMKHLDAPG+WL EKHRRLLMNK+CGRYLR+K+LH  IIY E VQD +E+NRRLRNP+
Subjt:  GLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPA

Query:  TTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
        TTAVQQA+HGL+Y VYGKPDVRRLMFEVFDFEQ+QPKAV
Subjt:  TTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV

Q9SZV0 Ribonuclease III domain-containing protein RNC1, chloroplastic1.3e-24170.97Show/hide
Query:  SSSFVKL-SSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAER
        SSS +++ SS +P  SFSSS++ F  K     +I       NLRI A      Q LP+++PQRLLKELA+RK AT PKKKVPP+RFILRPPLDDKKLAER
Subjt:  SSSFVKL-SSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAER

Query:  FLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVIEL
        FLNSPQL+LKSFPLLSSCLPSS+LNNADKTW+DEYLLE KQALGY LEPS+S GDDNPAK FDTLLYLAFQHPSC+R +ARH+++GHSRL FLGQYV+EL
Subjt:  FLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVIEL

Query:  ALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHFVK
        AL E+FLQRYPRESPGPMRERVFALIGKR LP+WIKAASLQNLIFPYDDMDK+IRK+REPPVK     +  A                            
Subjt:  ALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHFVK

Query:  MMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHPRL
            +  C+                            EVYRVLFEVFGMDPDA+EC+PR RRQLEDVDYVSVEFE K++ WQD+ +YKPPEDALFAHPRL
Subjt:  MMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHPRL

Query:  FRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAP
        FRACVPPGMHRFRGNIWD+DS+P+VMQ LGYP+ + D+I +ITEARNIELGLGLQLCFLHPSKHKFEHPRFC+ERLEY+GQKIQDI MAERLLMKHLDAP
Subjt:  FRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAP

Query:  GKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
        GKWLQEKHRRLLMNKFCGRYLREK LH  IIYSE+V D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVRRLMFEVFDFEQIQPKAV
Subjt:  GKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV

Arabidopsis top hitse value%identityAlignment
AT2G48121.1 BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1).2.0e-2284.21Show/hide
Query:  SEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
        +E+V D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVRRLMFEVFDFEQIQPKAV
Subjt:  SEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV

AT2G48121.2 LOCATED IN: mitochondrion3.2e-3385.71Show/hide
Query:  MNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
        MNKFCGRYLREK LH  IIYSE+V D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVRRLMFEVFDFEQIQPKAV
Subjt:  MNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV

AT4G37510.1 Ribonuclease III family protein9.4e-24370.97Show/hide
Query:  SSSFVKL-SSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAER
        SSS +++ SS +P  SFSSS++ F  K     +I       NLRI A      Q LP+++PQRLLKELA+RK AT PKKKVPP+RFILRPPLDDKKLAER
Subjt:  SSSFVKL-SSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDKKLAER

Query:  FLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVIEL
        FLNSPQL+LKSFPLLSSCLPSS+LNNADKTW+DEYLLE KQALGY LEPS+S GDDNPAK FDTLLYLAFQHPSC+R +ARH+++GHSRL FLGQYV+EL
Subjt:  FLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVIEL

Query:  ALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHFVK
        AL E+FLQRYPRESPGPMRERVFALIGKR LP+WIKAASLQNLIFPYDDMDK+IRK+REPPVK     +  A                            
Subjt:  ALAEYFLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHFVK

Query:  MMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHPRL
            +  C+                            EVYRVLFEVFGMDPDA+EC+PR RRQLEDVDYVSVEFE K++ WQD+ +YKPPEDALFAHPRL
Subjt:  MMLRVNSCYQYEIFLVAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHPRL

Query:  FRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAP
        FRACVPPGMHRFRGNIWD+DS+P+VMQ LGYP+ + D+I +ITEARNIELGLGLQLCFLHPSKHKFEHPRFC+ERLEY+GQKIQDI MAERLLMKHLDAP
Subjt:  FRACVPPGMHRFRGNIWDYDSRPQVMQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAP

Query:  GKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV
        GKWLQEKHRRLLMNKFCGRYLREK LH  IIYSE+V D YE+NRRLRNPATTAVQQA+HGL+Y +YGKPDVRRLMFEVFDFEQIQPKAV
Subjt:  GKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEKVQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCCACCCCAACATTATCTTCAGTATTCACAACCAATGGAACTTTCTTCTTCTTTTGTTAAACTCTCATCCCCTTCTCCTAATTACTCTTTCTCGTCTTCTTTAAC
CCCATTTATTGTTAAAATTCACCTCAATCATGCCATTTTCCCGAACCCCTCGTCCTCGAATTTGCGTATTTTTGCAGTTGCAATTGACCCACAACAAGAACTGCCCAAAA
ACAACCCTCAGAGACTGCTCAAGGAGCTTGCGGAGCGAAAACGAGCCACTTCTCCGAAGAAAAAGGTACCCCCAAGAAGGTTTATTCTTAGACCGCCATTAGATGATAAG
AAATTAGCGGAAAGGTTTCTCAATAGCCCTCAATTAACTCTCAAATCATTCCCATTACTGAGTTCTTGTTTACCATCTTCGCGGCTTAACAATGCTGATAAAACTTGGAT
GGACGAGTACTTGCTGGAAGCCAAGCAAGCCCTTGGATACCCCCTTGAGCCCTCTGATAGTTATGGAGACGACAATCCTGCAAAACAATTTGACACTTTGTTGTACCTGG
CCTTTCAGCATCCCTCATGCGAAAGAACAAAAGCCCGGCACATAAGATCGGGGCATTCGAGGCTATTGTTTTTGGGCCAATATGTAATCGAATTGGCCTTAGCGGAGTAT
TTTCTGCAGAGGTATCCTAGGGAATCGCCAGGTCCAATGAGGGAGAGGGTTTTTGCGTTAATTGGGAAGAGGAACCTTCCAAGGTGGATCAAAGCTGCCAGTTTGCAGAA
TTTGATATTCCCATATGATGATATGGACAAGATGATTAGGAAGGACCGCGAACCACCTGTGAAGGTAAACGTTGAAGGCATAATTGCTGCTCCTGGTAATCTAAATCTTG
GTAGCCTAGTTATGACCGTCGTAGACATTGAGCTTCATTATATAGATGGTCAACATTTCGTGAAGATGATGTTACGTGTTAATTCTTGTTACCAATATGAAATATTCTTG
GTAGCAGCAAAGGTTAGGAAGGAAATACTAGAGTTAAATCGTAGATGTGCTTTTACATCAAATCATGAAGTGTACCGGGTTCTTTTTGAGGTGTTTGGAATGGATCCAGA
TGCAGAGGAATGCGAACCAAGGTTACGCAGGCAACTTGAAGATGTAGATTATGTCTCTGTTGAATTTGAGGACAAAAGGATCAGCTGGCAAGATATGGTTTCCTATAAGC
CACCAGAAGATGCTCTGTTTGCGCACCCTAGGCTCTTCAGAGCTTGTGTCCCACCTGGCATGCATCGTTTCCGGGGTAATATATGGGATTACGATAGCCGACCTCAAGTA
ATGCAAGCACTAGGATACCCTATACCTGTTACTGACAAAATTCCTGACATCACGGAAGCGAGAAATATTGAACTTGGACTTGGACTGCAGCTTTGTTTTTTGCATCCATC
AAAACACAAGTTTGAACACCCTCGTTTCTGCTATGAACGATTAGAATACCTTGGCCAAAAGATCCAGGATATCGTGATGGCTGAGAGACTGTTGATGAAGCATTTAGATG
CTCCTGGAAAGTGGTTGCAGGAGAAGCACCGACGATTGCTCATGAACAAGTTTTGCGGGCGATATTTGAGAGAGAAATATCTTCATAAACTTATCATCTACTCCGAAAAA
GTTCAAGATGCATATGAGAACAACCGGAGGCTTCGAAACCCGGCCACCACGGCTGTTCAGCAAGCTCTTCATGGACTTTCTTATGTAGTTTATGGGAAGCCTGATGTGAG
ACGTCTCATGTTTGAGGTTTTTGATTTTGAGCAAATCCAACCTAAAGCTGTACGAGAATCTTGA
mRNA sequenceShow/hide mRNA sequence
TAAACCCTCACAAGACTCTGTAATTTCTCTTCCGCCACGCCTCCGCACCTTATCCATTCCTCTTCAGTTTTCTACTCCCAAGTCCCAACCCCTCCCAAAACCCTGCAACA
AAGGGCAAAATATTCAACTTCATAGCGAGGATTTCCCCATCCTCAAACCGGCCATGTCCAGTTTCTCGTAACCGAAGTTCTTAATGCTCGGTCCCCGACCTTCCGAATGA
ACCCACCCCAACATTATCTTCAGTATTCACAACCAATGGAACTTTCTTCTTCTTTTGTTAAACTCTCATCCCCTTCTCCTAATTACTCTTTCTCGTCTTCTTTAACCCCA
TTTATTGTTAAAATTCACCTCAATCATGCCATTTTCCCGAACCCCTCGTCCTCGAATTTGCGTATTTTTGCAGTTGCAATTGACCCACAACAAGAACTGCCCAAAAACAA
CCCTCAGAGACTGCTCAAGGAGCTTGCGGAGCGAAAACGAGCCACTTCTCCGAAGAAAAAGGTACCCCCAAGAAGGTTTATTCTTAGACCGCCATTAGATGATAAGAAAT
TAGCGGAAAGGTTTCTCAATAGCCCTCAATTAACTCTCAAATCATTCCCATTACTGAGTTCTTGTTTACCATCTTCGCGGCTTAACAATGCTGATAAAACTTGGATGGAC
GAGTACTTGCTGGAAGCCAAGCAAGCCCTTGGATACCCCCTTGAGCCCTCTGATAGTTATGGAGACGACAATCCTGCAAAACAATTTGACACTTTGTTGTACCTGGCCTT
TCAGCATCCCTCATGCGAAAGAACAAAAGCCCGGCACATAAGATCGGGGCATTCGAGGCTATTGTTTTTGGGCCAATATGTAATCGAATTGGCCTTAGCGGAGTATTTTC
TGCAGAGGTATCCTAGGGAATCGCCAGGTCCAATGAGGGAGAGGGTTTTTGCGTTAATTGGGAAGAGGAACCTTCCAAGGTGGATCAAAGCTGCCAGTTTGCAGAATTTG
ATATTCCCATATGATGATATGGACAAGATGATTAGGAAGGACCGCGAACCACCTGTGAAGGTAAACGTTGAAGGCATAATTGCTGCTCCTGGTAATCTAAATCTTGGTAG
CCTAGTTATGACCGTCGTAGACATTGAGCTTCATTATATAGATGGTCAACATTTCGTGAAGATGATGTTACGTGTTAATTCTTGTTACCAATATGAAATATTCTTGGTAG
CAGCAAAGGTTAGGAAGGAAATACTAGAGTTAAATCGTAGATGTGCTTTTACATCAAATCATGAAGTGTACCGGGTTCTTTTTGAGGTGTTTGGAATGGATCCAGATGCA
GAGGAATGCGAACCAAGGTTACGCAGGCAACTTGAAGATGTAGATTATGTCTCTGTTGAATTTGAGGACAAAAGGATCAGCTGGCAAGATATGGTTTCCTATAAGCCACC
AGAAGATGCTCTGTTTGCGCACCCTAGGCTCTTCAGAGCTTGTGTCCCACCTGGCATGCATCGTTTCCGGGGTAATATATGGGATTACGATAGCCGACCTCAAGTAATGC
AAGCACTAGGATACCCTATACCTGTTACTGACAAAATTCCTGACATCACGGAAGCGAGAAATATTGAACTTGGACTTGGACTGCAGCTTTGTTTTTTGCATCCATCAAAA
CACAAGTTTGAACACCCTCGTTTCTGCTATGAACGATTAGAATACCTTGGCCAAAAGATCCAGGATATCGTGATGGCTGAGAGACTGTTGATGAAGCATTTAGATGCTCC
TGGAAAGTGGTTGCAGGAGAAGCACCGACGATTGCTCATGAACAAGTTTTGCGGGCGATATTTGAGAGAGAAATATCTTCATAAACTTATCATCTACTCCGAAAAAGTTC
AAGATGCATATGAGAACAACCGGAGGCTTCGAAACCCGGCCACCACGGCTGTTCAGCAAGCTCTTCATGGACTTTCTTATGTAGTTTATGGGAAGCCTGATGTGAGACGT
CTCATGTTTGAGGTTTTTGATTTTGAGCAAATCCAACCTAAAGCTGTACGAGAATCTTGA
Protein sequenceShow/hide protein sequence
MNPPQHYLQYSQPMELSSSFVKLSSPSPNYSFSSSLTPFIVKIHLNHAIFPNPSSSNLRIFAVAIDPQQELPKNNPQRLLKELAERKRATSPKKKVPPRRFILRPPLDDK
KLAERFLNSPQLTLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEPSDSYGDDNPAKQFDTLLYLAFQHPSCERTKARHIRSGHSRLLFLGQYVIELALAEY
FLQRYPRESPGPMRERVFALIGKRNLPRWIKAASLQNLIFPYDDMDKMIRKDREPPVKVNVEGIIAAPGNLNLGSLVMTVVDIELHYIDGQHFVKMMLRVNSCYQYEIFL
VAAKVRKEILELNRRCAFTSNHEVYRVLFEVFGMDPDAEECEPRLRRQLEDVDYVSVEFEDKRISWQDMVSYKPPEDALFAHPRLFRACVPPGMHRFRGNIWDYDSRPQV
MQALGYPIPVTDKIPDITEARNIELGLGLQLCFLHPSKHKFEHPRFCYERLEYLGQKIQDIVMAERLLMKHLDAPGKWLQEKHRRLLMNKFCGRYLREKYLHKLIIYSEK
VQDAYENNRRLRNPATTAVQQALHGLSYVVYGKPDVRRLMFEVFDFEQIQPKAVRES