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Lsi01G009150 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G009150
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description4F5 domain-containing protein
Genome locationchr01:7408854..7411082
RNA-Seq ExpressionLsi01G009150
SyntenyLsi01G009150
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007513 - Uncharacterised protein family SERF, N-terminal
IPR026939 - ZNF706/At2g23090 superfamily
IPR039713 - At2g23090-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3663051.1 hypothetical protein FXO38_10838 [Capsicum annuum]5.3e-0888.37Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
        MGGGNGQKAKMAREKNMEK+KA KGSQLEANKKAMSIQ  VC+
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
KAF3671733.1 putative acyl-CoA-binding domain-containing protein 3-like [Capsicum annuum]5.3e-0888.37Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
        MGGGNGQKAKMAREKNMEK+KA KGSQLEANKKAMSIQ  VC+
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
XP_022133290.1 uncharacterized protein At2g23090 [Momordica charantia]5.3e-0888.37Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
        MGGGNGQKAKMAREKNMEKLKASKGSQLE+NKKAM+IQ  VC+
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
XP_022963417.1 uncharacterized protein At2g23090 [Cucurbita moschata]2.4e-0890.7Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
        MGGGNGQKAKMAREKNMEKLKASKGSQLE+NKKAMSIQ  VC+
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
XP_038882025.1 uncharacterized protein At2g23090 [Benincasa hispida]2.4e-0890.7Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
        MGGGNGQK+KMAREKNMEKLKASKGSQLEANKKAMSIQ  VC+
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
TrEMBL top hitse value%identityAlignment
A0A2G2X1K7 Uncharacterized protein (Fragment)2.6e-0888.37Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
        MGGGNGQKAKMAREKNMEK+KA KGSQLEANKKAMSIQ  VC+
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
A0A4D8ZTV8 4F5 domain-containing protein2.0e-0868.52Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQV---CVDNELTISVMD
        MGGGNGQKAKMARE+NMEKLK  KGSQLE NKKAM+IQV   C++  +T+ ++D
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQV---CVDNELTISVMD
A0A6J1BUU7 uncharacterized protein At2g230902.6e-0888.37Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
        MGGGNGQKAKMAREKNMEKLKASKGSQLE+NKKAM+IQ  VC+
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
A0A6J1HF74 uncharacterized protein At2g230901.2e-0890.7Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
        MGGGNGQKAKMAREKNMEKLKASKGSQLE+NKKAMSIQ  VC+
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
A0A6J1KLS2 uncharacterized protein At2g230901.2e-0890.7Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
        MGGGNGQKAKMAREKNMEKLKASKGSQLE+NKKAMSIQ  VC+
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQ--VCV
SwissProt top hitse value%identityAlignment
O64818 Uncharacterized protein At2g230901.8e-0675Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKAS-KGSQLEANKKAMSIQ--VCV
        MGGGN QK+ MAR KN+EK KA+ KGSQLEANKKAMSIQ  VC+
Subjt:  MGGGNGQKAKMAREKNMEKLKAS-KGSQLEANKKAMSIQ--VCV
Arabidopsis top hitse value%identityAlignment
AT2G23090.1 Uncharacterised protein family SERF1.3e-0775Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKAS-KGSQLEANKKAMSIQ--VCV
        MGGGN QK+ MAR KN+EK KA+ KGSQLEANKKAMSIQ  VC+
Subjt:  MGGGNGQKAKMAREKNMEKLKAS-KGSQLEANKKAMSIQ--VCV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGTGGGAACGGGCAGAAAGCGAAGATGGCTCGCGAGAAGAACATGGAGAAGCTGAAAGCTTCTAAGGGAAGTCAGCTGGAAGCAAACAAGAAAGCAATGTCTAT
TCAGGTATGTGTTGACAATGAACTTACCATTAGTGTTATGGACTATGGAGTTCATATCTGTTTCGTTAATGCAAGGTATGTATGCAAACCTTTATTTGCACCACTTCAGA
AGTCAAATGCAGGGAACATGCTGAGGCAAAGCACCCAAAATCTGATGTCTATACTTGTTTCCCACATCTTAAAAAATGAAAGAATAAACAAGAAAGAACAGTGTCAAGGC
ACACTCTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATCCACATGACAGCTCTAGCTATAAGATTAACAAACCGCATTGTGTTATTTGCGTCTTGCTTCCGAGTTCCGACCCCTTCCAAGCGAAGGCGATCTCTTCTTCGAATTAG
GGTTTCAAATTATTGAGGTTTTTTCGGGGTTCCTCGTAAAAATGGGAGGTGGGAACGGGCAGAAAGCGAAGATGGCTCGCGAGAAGAACATGGAGAAGCTGAAAGCTTCT
AAGGGAAGTCAGCTGGAAGCAAACAAGAAAGCAATGTCTATTCAGGTATGTGTTGACAATGAACTTACCATTAGTGTTATGGACTATGGAGTTCATATCTGTTTCGTTAA
TGCAAGGTATGTATGCAAACCTTTATTTGCACCACTTCAGAAGTCAAATGCAGGGAACATGCTGAGGCAAAGCACCCAAAATCTGATGTCTATACTTGTTTCCCACATCT
TAAAAAATGAAAGAATAAACAAGAAAGAACAGTGTCAAGGCACACTCTGCTAGCAACCTCCTTGCCTCGTTGTTTAGATGTGAATCTTTGCCTTTTGGACTCTAGCAGGA
TACATGATTTCTGGACGTGAACTGTGTTTGCGTGCTATATAGTGTGTTTATTTTATTGTCTTGTTCCCCATGTATCAGAAAATTGGCTTTGGATTAATATATTAGGGGTA
TATTTTCCATGGTATTGTTTAATTGGTGTAGTTAACTGATAGGCGGGTTGCTCTAGATTCTTCTATGAATTTACATGTTAGTTTTGCTATCTTTACTTGCATTGTTTTTA
TTTGACGAACTTACGGAGATTATTTTTCACATGGTGAATATTGTAGTACGTACTCCTTTCATATTTGTGTCAAATAGAAGAAAGATGAAAGATACTCAATTACACACTTC
ACTACGAAGCCTTAAGCTAATAAACACAGTTCAAAGTTTATATTA
Protein sequenceShow/hide protein sequence
MGGGNGQKAKMAREKNMEKLKASKGSQLEANKKAMSIQVCVDNELTISVMDYGVHICFVNARYVCKPLFAPLQKSNAGNMLRQSTQNLMSILVSHILKNERINKKEQCQG
TLC