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Lsi01G009170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G009170
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description4F5 domain-containing protein/zf-met2 domain-containing protein
Genome locationchr01:7415768..7417677
RNA-Seq ExpressionLsi01G009170
SyntenyLsi01G009170
Gene Ontology termsNA
InterPro domainsIPR026939 - ZNF706/At2g23090 superfamily
IPR039438 - At2g23090-like, zinc-binding domain
IPR039713 - At2g23090-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647516.1 hypothetical protein Csa_003813 [Cucumis sativus]2.2e-3564.34Show/hide
Query:  IIEVLSGFLVKMGGGNGQKAKMAREKNMEKLK-ASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKA
        I +VLSGFLVKMGGGNGQK+KMAREKNMEKLK ASKGE                F+GG+L      ++V   + V               GSQLEANKKA
Subjt:  IIEVLSGFLVKMGGGNGQKAKMAREKNMEKLK-ASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKA

Query:  MSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        MSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDV+TCFPHLKK
Subjt:  MSIQCKVCMQTFICTTSEVKCREHAEAKHPKSDVYTCFPHLKK

KAF3785435.1 Uncharacterized protein EJ110_NYTH27414 [Nymphaea thermarum]2.2e-2757.69Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF
        MGGGNGQK++MAREK MEK+K +KGE YLS S  L +  S                  S+  +R S           +GSQLE NKKAM+IQCKVCMQTF
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF

Query:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLK
        +CTTSEVKCREHAEAKHPK+D+Y CFPHLK
Subjt:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLK

XP_022133290.1 uncharacterized protein At2g23090 [Momordica charantia]1.7e-2757.25Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF
        MGGGNGQKAKMAREKNMEKLKASK                                                      GSQLE+NKKAM+IQCKVCMQTF
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF

Query:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
Subjt:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK

XP_022963417.1 uncharacterized protein At2g23090 [Cucurbita moschata]1.7e-2757.25Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF
        MGGGNGQKAKMAREKNMEKLKASK                                                      GSQLE+NKKAMSIQCKVCMQTF
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF

Query:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        ICTTSEVKCREHAEAKHPK+DVYTCFPHLKK
Subjt:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK

XP_038882025.1 uncharacterized protein At2g23090 [Benincasa hispida]1.7e-2757.25Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF
        MGGGNGQK+KMAREKNMEKLKASK                                                      GSQLEANKKAMSIQCKVCMQTF
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF

Query:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        ICTT+EVKCREHAEAKHPKSDVYTCFPHLKK
Subjt:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK

TrEMBL top hitse value%identityAlignment
A0A1S3B0Z2 uncharacterized protein At2g230901.1e-2757.25Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF
        MGGGNGQK+KMAREKNMEKLKAS                                                       GSQLEANKKAMSIQCKVCMQTF
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF

Query:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
Subjt:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK

A0A2G3CPQ2 Uncharacterized protein3.1e-2756.49Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF
        MGGGNGQKAKMAREKNMEK+KA K                                                      GSQLEANKKAMSIQCKVCMQTF
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF

Query:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        ICTTSEVKCREHAEAKHPKSDVY CFPHLKK
Subjt:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK

A0A6J1BUU7 uncharacterized protein At2g230908.2e-2857.25Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF
        MGGGNGQKAKMAREKNMEKLKASK                                                      GSQLE+NKKAM+IQCKVCMQTF
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF

Query:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
Subjt:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK

A0A6J1HF74 uncharacterized protein At2g230908.2e-2857.25Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF
        MGGGNGQKAKMAREKNMEKLKASK                                                      GSQLE+NKKAMSIQCKVCMQTF
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF

Query:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        ICTTSEVKCREHAEAKHPK+DVYTCFPHLKK
Subjt:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK

A0A6J1KLS2 uncharacterized protein At2g230908.2e-2857.25Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF
        MGGGNGQKAKMAREKNMEKLKASK                                                      GSQLE+NKKAMSIQCKVCMQTF
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF

Query:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        ICTTSEVKCREHAEAKHPK+DVYTCFPHLKK
Subjt:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK

SwissProt top hitse value%identityAlignment
O64818 Uncharacterized protein At2g230906.2e-2551.91Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF
        MGGGN QK+ MAR KN+EK KA                             AG                         GSQLEANKKAMSIQCKVCMQTF
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF

Query:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        ICTTSEVKCREHAEAKHPK+DV  CFPHLKK
Subjt:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK

Arabidopsis top hitse value%identityAlignment
AT2G23090.1 Uncharacterised protein family SERF4.4e-2651.91Show/hide
Query:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF
        MGGGN QK+ MAR KN+EK KA                             AG                         GSQLEANKKAMSIQCKVCMQTF
Subjt:  MGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQTF

Query:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK
        ICTTSEVKCREHAEAKHPK+DV  CFPHLKK
Subjt:  ICTTSEVKCREHAEAKHPKSDVYTCFPHLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTATTGAGGTTCTTTCGGGGTTCCTCGTAAAAATGGGAGGTGGGAACGGGCAGAAAGCGAAGATGGCTCGCGAGAAGAATATGGAGAAGCTGAAAGCTTCTAAGGGCGA
GTTTTATCTCTCTAATTCTTCGCCTTTATTTGTCGACAATTCTTTCTTTTTTGTTGGAGGATTCTTGGGGGGGCGGGCGGGCGGCGTAGCTGTTGAGTCTATTATTTTCG
TTCGTTATTCGGTTGAGATTTTGAAGATTTTGTTTGTTCTGTTATCAGGAAGTCAGCTGGAAGCAAACAAGAAAGCAATGTCTATTCAGTGCAAGGTATGTATGCAAACC
TTTATCTGCACCACTTCAGAGGTCAAATGCAGGGAACATGCTGAGGCAAAGCACCCAAAATCTGATGTCTATACTTGTTTCCCACATCTTAAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATTATTGAGGTTCTTTCGGGGTTCCTCGTAAAAATGGGAGGTGGGAACGGGCAGAAAGCGAAGATGGCTCGCGAGAAGAATATGGAGAAGCTGAAAGCTTCTAAGGGCGA
GTTTTATCTCTCTAATTCTTCGCCTTTATTTGTCGACAATTCTTTCTTTTTTGTTGGAGGATTCTTGGGGGGGCGGGCGGGCGGCGTAGCTGTTGAGTCTATTATTTTCG
TTCGTTATTCGGTTGAGATTTTGAAGATTTTGTTTGTTCTGTTATCAGGAAGTCAGCTGGAAGCAAACAAGAAAGCAATGTCTATTCAGTGCAAGGTATGTATGCAAACC
TTTATCTGCACCACTTCAGAGGTCAAATGCAGGGAACATGCTGAGGCAAAGCACCCAAAATCTGATGTCTATACTTGTTTCCCACATCTTAAAAAATGA
Protein sequenceShow/hide protein sequence
IIEVLSGFLVKMGGGNGQKAKMAREKNMEKLKASKGEFYLSNSSPLFVDNSFFFVGGFLGGRAGGVAVESIIFVRYSVEILKILFVLLSGSQLEANKKAMSIQCKVCMQT
FICTTSEVKCREHAEAKHPKSDVYTCFPHLKK