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Lsi01G009320 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G009320
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGibberellin regulated protein
Genome locationchr01:7534930..7535476
RNA-Seq ExpressionLsi01G009320
SyntenyLsi01G009320
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647513.1 hypothetical protein Csa_002853 [Cucumis sativus]2.8e-3595Show/hide
Query:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKSVSVTLVLLS ILSSF LQYA ADSSTTYAPRVKDRCLKYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

KAG6595002.1 Snakin-1, partial [Cucurbita argyrosperma subsp. sororia]4.4e-3388.75Show/hide
Query:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LVL+S +LSSFLLQ+AIADSS TYAPRVKDRCLKYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

TYK12845.1 peamaclein-like [Cucumis melo var. makuwa]3.6e-3593.75Show/hide
Query:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS+SVTLVLLSFILSSF LQY  ADSSTTYAPRVKDRCLKYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_031742787.1 peamaclein-like isoform X1 [Cucumis sativus]6.4e-3278.95Show/hide
Query:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPR---------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKSVSVTLVLLS ILSSF LQYA ADSSTTYAP+               VKDRCLKYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPR---------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

XP_038880848.1 peamaclein-like [Benincasa hispida]4.9e-3279.79Show/hide
Query:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPR--------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS SV LVLLS ILSSFLLQYAIADSSTTYAP               VKDRCLKYCG+CCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPR--------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

TrEMBL top hitse value%identityAlignment
A0A0A0KLG3 Uncharacterized protein3.1e-3278.95Show/hide
Query:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPR---------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKSVSVTLVLLS ILSSF LQYA ADSSTTYAP+               VKDRCLKYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPR---------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A1S3B1M5 peamaclein-like6.9e-3278.72Show/hide
Query:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPR--------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS+SVTLVLLSFILSSF LQY  ADSSTTYAP               VKDRCLKYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPR--------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A5D3CMS1 Peamaclein-like1.7e-3593.75Show/hide
Query:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS+SVTLVLLSFILSSF LQY  ADSSTTYAPRVKDRCLKYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A6J1HEX9 peamaclein-like3.2e-2973.4Show/hide
Query:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPR--------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LVL+S +LSSFLLQ+AIADS  TYAP               VKDRCLKYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPR--------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

A0A6J1KSF0 peamaclein-like1.6e-2872.34Show/hide
Query:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPR--------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MKS S++LVL+S ILSSFLL +AIADSS TY P               VKDRC+KYCGLCCQQC CVPSGTYGNKSECPCYRDKLNSKGKSKCP
Subjt:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPR--------------VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

SwissProt top hitse value%identityAlignment
O80641 Gibberellin-regulated protein 82.7e-1751.72Show/hide
Query:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPRVK-------DRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK V V   ++S +L+S     + ADSS      V+       + CLKYC +CCQ+CNCVPSGT+G+K ECPCYRD  NSKG SKCP
Subjt:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPRVK-------DRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

O82328 Gibberellin-regulated protein 71.2e-1778.26Show/hide
Query:  VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        +KDRCLKYCG+CC+ C CVPSGTYGNK EC CYRDKL+SKG  KCP
Subjt:  VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

P86888 Peamaclein3.5e-1775.56Show/hide
Query:  KDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        ++RCLKYCG+CC++C+CVPSGTYGNK ECPCYRD  NSKG  KCP
Subjt:  KDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Q8LFM2 Gibberellin-regulated protein 109.3e-1853.33Show/hide
Query:  MKSVSVTLVLLSFILSSFLLQYAIADSS---------TTYAPRVKDRCLKYCGLCCQQCN-CVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK  +V ++++S +++S L   + ADSS          + A R +DRCLKYC +CC++CN CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  MKSVSVTLVLLSFILSSFLLQYAIADSS---------TTYAPRVKDRCLKYCGLCCQQCN-CVPSGTYGNKSECPCYRDKLNSKGKSKCP

Q948Z4 Snakin-11.5e-2054.55Show/hide
Query:  MKSVSVTLVLLSFILSSFLLQYAIADSS--------TTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK   +TL+L++ +++  L+Q  +A SS              + DRCLKYCG+CC++C CVPSGTYGNK ECPCYRDK NSKGKSKCP
Subjt:  MKSVSVTLVLLSFILSSFLLQYAIADSS--------TTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

Arabidopsis top hitse value%identityAlignment
AT1G10588.1 Gibberellin-regulated family protein7.3e-1851.16Show/hide
Query:  VSVTLVLLSFILSSFLLQYAIADSST---------TYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        V V   ++S +L+S     + ADSS          + A R  + CL+ C +CCQ+CNCVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  VSVTLVLLSFILSSFLLQYAIADSST---------TYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT1G10588.2 Gibberellin-regulated family protein7.3e-1851.76Show/hide
Query:  VSVTLVLLSFILSSFLLQYAIADSS--------TTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        V V   ++S +L+S     + ADSS         + A R  + CL+ C +CCQ+CNCVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  VSVTLVLLSFILSSFLLQYAIADSS--------TTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT2G14900.1 Gibberellin-regulated family protein8.6e-1978.26Show/hide
Query:  VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        +KDRCLKYCG+CC+ C CVPSGTYGNK EC CYRDKL+SKG  KCP
Subjt:  VKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT2G39540.1 Gibberellin-regulated family protein1.9e-1851.72Show/hide
Query:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPRVK-------DRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK V V   ++S +L+S     + ADSS      V+       + CLKYC +CCQ+CNCVPSGT+G+K ECPCYRD  NSKG SKCP
Subjt:  MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPRVK-------DRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP

AT5G59845.1 Gibberellin-regulated family protein6.6e-1953.33Show/hide
Query:  MKSVSVTLVLLSFILSSFLLQYAIADSS---------TTYAPRVKDRCLKYCGLCCQQCN-CVPSGTYGNKSECPCYRDKLNSKGKSKCP
        MK  +V ++++S +++S L   + ADSS          + A R +DRCLKYC +CC++CN CVPSGTYGNK ECPCYRD  NSKG SKCP
Subjt:  MKSVSVTLVLLSFILSSFLLQYAIADSS---------TTYAPRVKDRCLKYCGLCCQQCN-CVPSGTYGNKSECPCYRDKLNSKGKSKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTGTTTCTGTCACTTTGGTTCTTCTTTCATTCATTCTGAGCTCCTTCCTCCTCCAATATGCCATTGCTGATTCCTCTACAACCTATGCTCCAAGGGTGAAGGA
CAGGTGCTTGAAGTATTGTGGACTCTGCTGCCAACAGTGCAATTGTGTGCCCTCTGGAACCTATGGAAACAAGTCAGAATGCCCTTGTTATAGAGACAAGTTGAACTCCA
AGGGAAAATCTAAATGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
AAAACATTCTTCACAGTCCTTTTCCATTCTCACATTCCCCTCCACTCCACAAACCAAGTCTATAAATATCAGATAGAAACTATTGAAATGTCAGTAGAACACTAACCTTA
AAGCAGAAAGAGAAAGATGAAATCTGTTTCTGTCACTTTGGTTCTTCTTTCATTCATTCTGAGCTCCTTCCTCCTCCAATATGCCATTGCTGATTCCTCTACAACCTATG
CTCCAAGGGTGAAGGACAGGTGCTTGAAGTATTGTGGACTCTGCTGCCAACAGTGCAATTGTGTGCCCTCTGGAACCTATGGAAACAAGTCAGAATGCCCTTGTTATAGA
GACAAGTTGAACTCCAAGGGAAAATCTAAATGCCCTTGA
Protein sequenceShow/hide protein sequence
MKSVSVTLVLLSFILSSFLLQYAIADSSTTYAPRVKDRCLKYCGLCCQQCNCVPSGTYGNKSECPCYRDKLNSKGKSKCP