; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G009370 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G009370
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionzinc finger protein 7-like
Genome locationchr01:7583568..7591723
RNA-Seq ExpressionLsi01G009370
SyntenyLsi01G009370
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12850.1 zinc finger protein 7-like [Cucumis melo var. makuwa]1.4e-5080Show/hide
Query:  MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQ
        M+FPYKQ QQ DSS     CNPDDNLGQLLSLGL R+  G   S A++SETKS+V+N NGG DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQ
Subjt:  MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQ

Query:  SDPKMMMLSTMAVSLNYAVASLGMKAHSLPHNPTQ
        SDPKMMMLSTMAVSLNYAVASLG++ HSLPH PTQ
Subjt:  SDPKMMMLSTMAVSLNYAVASLGMKAHSLPHNPTQ

XP_004141995.1 zinc finger protein 4 [Cucumis sativus]9.9e-5282.22Show/hide
Query:  MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQ
        MNFPYKQ QQ DSS     CNPDDNLGQLLSLGL R D G   S  + SETKS+VVN NGG DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQ
Subjt:  MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQ

Query:  SDPKMMMLSTMAVSLNYAVASLGMKAHSLPHNPTQ
        SDPKM+MLSTMAVSLNYAVASLG+K HSLPHNPTQ
Subjt:  SDPKMMMLSTMAVSLNYAVASLGMKAHSLPHNPTQ

XP_008441108.1 PREDICTED: zinc finger protein 7-like [Cucumis melo]4.9e-5180.74Show/hide
Query:  MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQ
        M+FPYKQ QQ DSS     CNPDDNLGQLLSLGL R+  G   S A++SETKS+V+N NGG DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQ
Subjt:  MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQ

Query:  SDPKMMMLSTMAVSLNYAVASLGMKAHSLPHNPTQ
        SDPKMMMLSTMAVSLNYAVASLG+K HSLPH PTQ
Subjt:  SDPKMMMLSTMAVSLNYAVASLGMKAHSLPHNPTQ

XP_022132698.1 zinc finger protein 4-like [Momordica charantia]1.1e-3467.18Show/hide
Query:  MNFPYKQLQQHDSSCNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNS-NGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPK
        MNFP K+ Q   +    DDNLG+ LSLGL RT   G  +T A+S TKSK+V +  GG DD+LFSCN+CM+KFYSSQALGGHQNAHK+ERGAAKR Q+D K
Subjt:  MNFPYKQLQQHDSSCNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNS-NGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPK

Query:  MMMLSTMAVS-LNYAVASLGMKAHSLPHNPT
        MMMLSTMAVS LNYAVASLG++ HS+ HNP+
Subjt:  MMMLSTMAVS-LNYAVASLGMKAHSLPHNPT

XP_038882248.1 zinc finger protein 7-like [Benincasa hispida]1.4e-5385.29Show/hide
Query:  MNFPYK-QLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQ
        MNFPYK Q+QQ DSS     CNPDDNLGQLLSLGLFR D GG PST AL ETKSKVVN NG  D RLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQ
Subjt:  MNFPYK-QLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQ

Query:  QSDPKMMMLSTMAVSLNYAVASLGMKAHSLPHNPTQ
        QSDPKMMMLSTMAVSLNYAVASLGM+ HSLPHNPTQ
Subjt:  QSDPKMMMLSTMAVSLNYAVASLGMKAHSLPHNPTQ

TrEMBL top hitse value%identityAlignment
A0A0A0KIE9 C2H2-type domain-containing protein4.8e-5282.22Show/hide
Query:  MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQ
        MNFPYKQ QQ DSS     CNPDDNLGQLLSLGL R D G   S  + SETKS+VVN NGG DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQ
Subjt:  MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQ

Query:  SDPKMMMLSTMAVSLNYAVASLGMKAHSLPHNPTQ
        SDPKM+MLSTMAVSLNYAVASLG+K HSLPHNPTQ
Subjt:  SDPKMMMLSTMAVSLNYAVASLGMKAHSLPHNPTQ

A0A1S3B3B0 zinc finger protein 7-like2.4e-5180.74Show/hide
Query:  MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQ
        M+FPYKQ QQ DSS     CNPDDNLGQLLSLGL R+  G   S A++SETKS+V+N NGG DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQ
Subjt:  MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQ

Query:  SDPKMMMLSTMAVSLNYAVASLGMKAHSLPHNPTQ
        SDPKMMMLSTMAVSLNYAVASLG+K HSLPH PTQ
Subjt:  SDPKMMMLSTMAVSLNYAVASLGMKAHSLPHNPTQ

A0A5D3CN29 Zinc finger protein 7-like6.9e-5180Show/hide
Query:  MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQ
        M+FPYKQ QQ DSS     CNPDDNLGQLLSLGL R+  G   S A++SETKS+V+N NGG DDRLFSCNYCMRKFYSSQALGGHQNAHK+ERGAAKRQQ
Subjt:  MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQ

Query:  SDPKMMMLSTMAVSLNYAVASLGMKAHSLPHNPTQ
        SDPKMMMLSTMAVSLNYAVASLG++ HSLPH PTQ
Subjt:  SDPKMMMLSTMAVSLNYAVASLGMKAHSLPHNPTQ

A0A6J1BX17 zinc finger protein 4-like5.3e-3567.18Show/hide
Query:  MNFPYKQLQQHDSSCNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNS-NGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPK
        MNFP K+ Q   +    DDNLG+ LSLGL RT   G  +T A+S TKSK+V +  GG DD+LFSCN+CM+KFYSSQALGGHQNAHK+ERGAAKR Q+D K
Subjt:  MNFPYKQLQQHDSSCNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNS-NGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPK

Query:  MMMLSTMAVS-LNYAVASLGMKAHSLPHNPT
        MMMLSTMAVS LNYAVASLG++ HS+ HNP+
Subjt:  MMMLSTMAVS-LNYAVASLGMKAHSLPHNPT

A0A6J1GFC5 zinc finger protein 7-like4.5e-3466.42Show/hide
Query:  MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKR-Q
        M+FP K    HDS+     C+PD NLGQLLSLGL   +  GQPST    +TKSK+ N    ++DRLFSCNYCM+KFYSSQALGGHQNAHK+ERGAAKR  
Subjt:  MNFPYKQLQQHDSS-----CNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKR-Q

Query:  QSDPK-MMMLSTMAVSLNYAVASLGMKAHSLPHNPTQ
         SDP+  +MLSTMA SLNYAVASLG+  HSLPHNPTQ
Subjt:  QSDPK-MMMLSTMAVSLNYAVASLGMKAHSLPHNPTQ

SwissProt top hitse value%identityAlignment
Q39261 Zinc finger protein 21.7e-0957.14Show/hide
Query:  AALSETKSKVVNSNGGSDD-RLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQ
        +++S + S   NS+   +  R+FSCNYC RKFYSSQALGGHQNAHK ER  AK+ +
Subjt:  AALSETKSKVVNSNGGSDD-RLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQ

Q39262 Zinc finger protein 38.0e-1245.83Show/hide
Query:  LSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA------------SLGMKAHSLPH
        + +T S V  S   ++ +LFSCNYC R FYSSQALGGHQNAHK+ER  AKR Q     M  S  A    Y  +            SLG++AHS+ H
Subjt:  LSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA------------SLGMKAHSLPH

Q39263 Zinc finger protein 42.0e-1054.55Show/hide
Query:  RLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVASLGMKAHSLP
        R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR        +      S NYA A+       LP
Subjt:  RLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVASLGMKAHSLP

Q39266 Zinc finger protein 71.4e-1150.56Show/hide
Query:  ETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVASLGMKAHS-LPHNPTQVP
        +TKS    +N     R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR     +  M         Y  +SLGM+AHS L H+    P
Subjt:  ETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVASLGMKAHS-LPHNPTQVP

Q42485 Zinc finger protein 11.2e-1047.37Show/hide
Query:  SDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTM----------AVSLNYAVAS------------LGMKAHSLPHNPT
        +D R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR Q     M LS++          +VS   ++AS            LG++AHS  H P+
Subjt:  SDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTM----------AVSLNYAVAS------------LGMKAHSLPHNPT

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 79.7e-1350.56Show/hide
Query:  ETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVASLGMKAHS-LPHNPTQVP
        +TKS    +N     R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR     +  M         Y  +SLGM+AHS L H+    P
Subjt:  ETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVASLGMKAHS-LPHNPTQVP

AT1G66140.1 zinc finger protein 41.4e-1154.55Show/hide
Query:  RLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVASLGMKAHSLP
        R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR        +      S NYA A+       LP
Subjt:  RLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVASLGMKAHSLP

AT1G80730.1 zinc-finger protein 18.2e-1247.37Show/hide
Query:  SDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTM----------AVSLNYAVAS------------LGMKAHSLPHNPT
        +D R+FSCNYC RKFYSSQALGGHQNAHK+ER  AKR Q     M LS++          +VS   ++AS            LG++AHS  H P+
Subjt:  SDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTM----------AVSLNYAVAS------------LGMKAHSLPHNPT

AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein4.3e-1347.19Show/hide
Query:  NSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA-----------SLGMKAHSLPHNPT
        N +  ++ +LFSCNYC R FYSSQALGGHQNAHK+ER  AKR Q      M S  A    Y  A           +LG++AHS+ H P+
Subjt:  NSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA-----------SLGMKAHSLPHNPT

AT5G25160.1 zinc finger protein 35.7e-1345.83Show/hide
Query:  LSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA------------SLGMKAHSLPH
        + +T S V  S   ++ +LFSCNYC R FYSSQALGGHQNAHK+ER  AKR Q     M  S  A    Y  +            SLG++AHS+ H
Subjt:  LSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSLNYAVA------------SLGMKAHSLPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTCCCCTACAAACAACTACAACAACATGACTCAAGTTGCAACCCAGATGATAACTTAGGCCAATTATTGAGTTTAGGCCTCTTCCGAACCGACAGCGGTGGCCA
GCCATCGACCGCCGCTCTCTCGGAGACCAAATCAAAGGTCGTAAACAGTAATGGTGGCAGCGACGACAGGTTGTTCTCATGCAACTATTGCATGAGAAAGTTTTATAGTT
CACAAGCTTTGGGAGGGCACCAAAATGCTCACAAGAAAGAAAGAGGAGCTGCCAAAAGGCAACAGTCAGATCCCAAGATGATGATGCTATCAACAATGGCTGTTTCTCTC
AACTATGCAGTTGCTTCACTTGGTATGAAAGCTCATTCCCTTCCCCATAACCCTACACAAGTCCCTTCCTCTTACGAATTGTCTGCTTCCGCCGGCAGCCGTCATTGTCA
TCGACAAACAAATCCAGCTGTAAAGGACACTCAATCTGACTTGGCACTCATTCTGGGCCCCCCTGTCCTCTCTCCCCACGACATGGCTACGCGTCCCGGCCCCATCTGTC
CCTTTTCCGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTTCCCCTACAAACAACTACAACAACATGACTCAAGTTGCAACCCAGATGATAACTTAGGCCAATTATTGAGTTTAGGCCTCTTCCGAACCGACAGCGGTGGCCA
GCCATCGACCGCCGCTCTCTCGGAGACCAAATCAAAGGTCGTAAACAGTAATGGTGGCAGCGACGACAGGTTGTTCTCATGCAACTATTGCATGAGAAAGTTTTATAGTT
CACAAGCTTTGGGAGGGCACCAAAATGCTCACAAGAAAGAAAGAGGAGCTGCCAAAAGGCAACAGTCAGATCCCAAGATGATGATGCTATCAACAATGGCTGTTTCTCTC
AACTATGCAGTTGCTTCACTTGGTATGAAAGCTCATTCCCTTCCCCATAACCCTACACAAGTCCCTTCCTCTTACGAATTGTCTGCTTCCGCCGGCAGCCGTCATTGTCA
TCGACAAACAAATCCAGCTGTAAAGGACACTCAATCTGACTTGGCACTCATTCTGGGCCCCCCTGTCCTCTCTCCCCACGACATGGCTACGCGTCCCGGCCCCATCTGTC
CCTTTTCCGCGTAG
Protein sequenceShow/hide protein sequence
MNFPYKQLQQHDSSCNPDDNLGQLLSLGLFRTDSGGQPSTAALSETKSKVVNSNGGSDDRLFSCNYCMRKFYSSQALGGHQNAHKKERGAAKRQQSDPKMMMLSTMAVSL
NYAVASLGMKAHSLPHNPTQVPSSYELSASAGSRHCHRQTNPAVKDTQSDLALILGPPVLSPHDMATRPGPICPFSA