; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G009550 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G009550
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein RER1
Genome locationchr01:7761687..7762493
RNA-Seq ExpressionLsi01G009550
SyntenyLsi01G009550
Gene Ontology termsGO:0006621 - protein retention in ER lumen (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR004932 - Retrieval of early ER protein Rer1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034324.1 Protein RER1A [Cucurbita argyrosperma subsp. argyrosperma]5.5e-5691.13Show/hide
Query:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ
        MES AAGVGLG A DV STTLFSRWSH VSRRYQHLLD+CTPYIFYRW ACFF+  IYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLH 
Subjt:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ

Query:  GPALPLRESDEFRPFVRRLPEFKF
        GPALPLRESDEFRPFVRRLPEFKF
Subjt:  GPALPLRESDEFRPFVRRLPEFKF

XP_022949760.1 protein RER1A-like [Cucurbita moschata]8.5e-5791.94Show/hide
Query:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ
        MES AAGVGLG AEDV STTLFSRWSH VSRRYQHLLD+CTPYIFYRW ACFF+  IYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLH 
Subjt:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ

Query:  GPALPLRESDEFRPFVRRLPEFKF
        GPALPLRESDEFRPFVRRLPEFKF
Subjt:  GPALPLRESDEFRPFVRRLPEFKF

XP_022977598.1 protein RER1A-like [Cucurbita maxima]1.5e-5691.94Show/hide
Query:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ
        MES AAGVGL AAE VSSTTLF+RWSHAVSRRYQHLLD+CTPYIFYRW ACFF+  IYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLH 
Subjt:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ

Query:  GPALPLRESDEFRPFVRRLPEFKF
        GPALPLRESDEFRPFVRRLPEFKF
Subjt:  GPALPLRESDEFRPFVRRLPEFKF

XP_023544323.1 protein RER1A-like [Cucurbita pepo subsp. pepo]1.1e-5692.74Show/hide
Query:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ
        MES AAGV LGAAEDV STTLFSRWSHAVSRRYQHLLD+CTPYIFYRW ACFF+  IYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLH 
Subjt:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ

Query:  GPALPLRESDEFRPFVRRLPEFKF
        GPALPLRESDEFRPFVRRLPEFKF
Subjt:  GPALPLRESDEFRPFVRRLPEFKF

XP_038880923.1 protein RER1A-like [Benincasa hispida]2.5e-5692.74Show/hide
Query:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ
        ME VAAGVGLGAAEDVSSTTLFSR SHAVSRRYQHLLD+CTPYIFYRW ACFFI  IYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDL++
Subjt:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ

Query:  GPALPLRESDEFRPFVRRLPEFKF
        GPALP+RESDEFRPFVRRLPEFKF
Subjt:  GPALPLRESDEFRPFVRRLPEFKF

TrEMBL top hitse value%identityAlignment
A0A6J1BTU8 Protein RER11.6e-5388.1Show/hide
Query:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ
        MESVAAGVGLGAAED SSTT+ SRWSHAVSRRYQHLLD+CTP+IFYRW ACF I  IYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEI DLH+
Subjt:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ

Query:  --GPALPLRESDEFRPFVRRLPEFKF
          GPALP+ ESDEFRPFVRRLPEFKF
Subjt:  --GPALPLRESDEFRPFVRRLPEFKF

A0A6J1GCX4 Protein RER14.1e-5791.94Show/hide
Query:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ
        MES AAGVGLG AEDV STTLFSRWSH VSRRYQHLLD+CTPYIFYRW ACFF+  IYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLH 
Subjt:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ

Query:  GPALPLRESDEFRPFVRRLPEFKF
        GPALPLRESDEFRPFVRRLPEFKF
Subjt:  GPALPLRESDEFRPFVRRLPEFKF

A0A6J1HHE0 Protein RER13.5e-5691.13Show/hide
Query:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ
        MESVAAGVG GAAEDVSSTTLF+RWSHA S RYQHLLD+C+PYIFYRW ACFFI  IYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLH 
Subjt:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ

Query:  GPALPLRESDEFRPFVRRLPEFKF
        GPALP+RESDEFRPFVRRLPEFKF
Subjt:  GPALPLRESDEFRPFVRRLPEFKF

A0A6J1IRU9 Protein RER17.0e-5791.94Show/hide
Query:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ
        MES AAGVGL AAE VSSTTLF+RWSHAVSRRYQHLLD+CTPYIFYRW ACFF+  IYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLH 
Subjt:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ

Query:  GPALPLRESDEFRPFVRRLPEFKF
        GPALPLRESDEFRPFVRRLPEFKF
Subjt:  GPALPLRESDEFRPFVRRLPEFKF

A0A6J1KTW6 Protein RER13.5e-5691.13Show/hide
Query:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ
        MESVAAGVG GAAEDVSSTTLF+RWSHA S RYQHLLD+C+PYIFYRW ACFFI  IYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLH 
Subjt:  MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQ

Query:  GPALPLRESDEFRPFVRRLPEFKF
        GPALP+RESDEFRPFVRRLPEFKF
Subjt:  GPALPLRESDEFRPFVRRLPEFKF

SwissProt top hitse value%identityAlignment
O48670 Protein RER1A1.6e-2960.19Show/hide
Query:  SSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQGPALPLRESDEFRPFV
        S  T   + +H   R YQH LDK TP+  YRW     +  IY LRVY I+GFYI++YGLGIY+LNLLIGFLSP VDPE   +  GP+LP R SDEF+PF+
Subjt:  SSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQGPALPLRESDEFRPFV

Query:  RRLPEFKF
        RRLPEFKF
Subjt:  RRLPEFKF

O48671 Protein RER1B3.6e-2659.26Show/hide
Query:  SSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQGPALPLRESDEFRPFV
        S  T   +  H   R YQ+ LDK TP+   RW        IY LRVY I GFYI+SYGLGIY+LNLLIGFLSP VDPE L++  G  LP R SDEF+PF+
Subjt:  SSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQGPALPLRESDEFRPFV

Query:  RRLPEFKF
        RRLPEFKF
Subjt:  RRLPEFKF

Q5ZHM5 Protein RER15.2e-2560.22Show/hide
Query:  YQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEIL-DLHQGPALPLRESDEFRPFVRRLPEFKF
        YQ  LDK TPY   RW     ++FIY++RVYL++G+YIV+Y LGIY LNL I FLSP+VDP ++ D   GP+LP R+++EFRPF+RRLPEFKF
Subjt:  YQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEIL-DLHQGPALPLRESDEFRPFVRRLPEFKF

Q9CQU3 Protein RER16.8e-2553.92Show/hide
Query:  RWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEIL-DLHQGPALPLRESDEFRPFVRRLPEF
        R+   + + YQ  LDK TPY   RW     ++F+Y++RVYL++G+YIV+Y LGIY LNL I FLSP+VDP ++ D   GP+LP ++++EFRPF+RRLPEF
Subjt:  RWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEIL-DLHQGPALPLRESDEFRPFVRRLPEF

Query:  KF
        KF
Subjt:  KF

Q9ZWI7 Protein RER1C2.4e-3054.1Show/hide
Query:  SVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQGP
        + A    L +++  S     +R  HA S+R QHLLDK  P++ YRW AC  +  IY++RVY +EGFYI++Y +GIY+LNL+I FLSPQ DPE   L  G 
Subjt:  SVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQGP

Query:  ALPLRESDEFRPFVRRLPEFKF
        +LP R SDE+RPFVRRLPEFKF
Subjt:  ALPLRESDEFRPFVRRLPEFKF

Arabidopsis top hitse value%identityAlignment
AT2G18240.1 Rer1 family protein1.7e-2351.96Show/hide
Query:  SRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQGPALPLRESDEFRPFVRRLPEF
        ++W    S+ +Q+ LD+  P I  RW        IY+ RVY + G++++SYGL  YILNLLIGFLSP+VDPE L+     +LP+ ESDE++PFVRRLPEF
Subjt:  SRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQGPALPLRESDEFRPFVRRLPEF

Query:  KF
        KF
Subjt:  KF

AT2G21600.1 endoplasmatic reticulum retrieval protein 1B2.6e-2759.26Show/hide
Query:  SSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQGPALPLRESDEFRPFV
        S  T   +  H   R YQ+ LDK TP+   RW        IY LRVY I GFYI+SYGLGIY+LNLLIGFLSP VDPE L++  G  LP R SDEF+PF+
Subjt:  SSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQGPALPLRESDEFRPFV

Query:  RRLPEFKF
        RRLPEFKF
Subjt:  RRLPEFKF

AT2G23310.1 Rer1 family protein1.7e-3154.1Show/hide
Query:  SVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQGP
        + A    L +++  S     +R  HA S+R QHLLDK  P++ YRW AC  +  IY++RVY +EGFYI++Y +GIY+LNL+I FLSPQ DPE   L  G 
Subjt:  SVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQGP

Query:  ALPLRESDEFRPFVRRLPEFKF
        +LP R SDE+RPFVRRLPEFKF
Subjt:  ALPLRESDEFRPFVRRLPEFKF

AT2G23310.2 Rer1 family protein1.7e-3154.1Show/hide
Query:  SVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQGP
        + A    L +++  S     +R  HA S+R QHLLDK  P++ YRW AC  +  IY++RVY +EGFYI++Y +GIY+LNL+I FLSPQ DPE   L  G 
Subjt:  SVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQGP

Query:  ALPLRESDEFRPFVRRLPEFKF
        +LP R SDE+RPFVRRLPEFKF
Subjt:  ALPLRESDEFRPFVRRLPEFKF

AT4G39220.1 Rer1 family protein1.1e-3060.19Show/hide
Query:  SSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQGPALPLRESDEFRPFV
        S  T   + +H   R YQH LDK TP+  YRW     +  IY LRVY I+GFYI++YGLGIY+LNLLIGFLSP VDPE   +  GP+LP R SDEF+PF+
Subjt:  SSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQGPALPLRESDEFRPFV

Query:  RRLPEFKF
        RRLPEFKF
Subjt:  RRLPEFKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGTGTAGCGGCTGGCGTTGGTCTTGGCGCCGCAGAAGATGTTTCTTCTACCACTCTCTTTTCACGGTGGAGCCATGCCGTTTCCCGGCGGTATCAGCATCTCCT
CGATAAGTGTACCCCATACATCTTCTACCGTTGGACGGCCTGTTTTTTCATCACCTTTATCTATGTCCTTCGGGTTTACCTCATCGAAGGATTCTACATCGTCTCTTACG
GTCTCGGAATTTACATCCTCAATCTTCTAATCGGCTTTCTCTCCCCTCAAGTGGATCCTGAGATCCTGGATCTCCATCAAGGCCCTGCGCTTCCTCTCAGGGAATCCGAC
GAGTTCCGTCCTTTCGTTCGTAGGCTTCCGGAGTTCAAGTTCTGCGTCACGAGCTTGAATGTTAATAATTGGGGTAGGAATTCTTTTGACTTTTCACACATAGGACGTGG
ATTTGATTATGATTGGTGCTGGAATCTCTAG
mRNA sequenceShow/hide mRNA sequence
GTAAGAAGAACGGCCAGTTGGTCAACCCTACAATGACAAATGGCAGAAGAGAGAATTATAGAGAGAAACATCGGAATTAGGAAGGGAAAAGTTCAAAGGAAATCTTGAGT
ATAGAAATTGCGCGACGACACCTGCTGATACTCGTGGTTCCTAATGGAAAGTGTAGCGGCTGGCGTTGGTCTTGGCGCCGCAGAAGATGTTTCTTCTACCACTCTCTTTT
CACGGTGGAGCCATGCCGTTTCCCGGCGGTATCAGCATCTCCTCGATAAGTGTACCCCATACATCTTCTACCGTTGGACGGCCTGTTTTTTCATCACCTTTATCTATGTC
CTTCGGGTTTACCTCATCGAAGGATTCTACATCGTCTCTTACGGTCTCGGAATTTACATCCTCAATCTTCTAATCGGCTTTCTCTCCCCTCAAGTGGATCCTGAGATCCT
GGATCTCCATCAAGGCCCTGCGCTTCCTCTCAGGGAATCCGACGAGTTCCGTCCTTTCGTTCGTAGGCTTCCGGAGTTCAAGTTCTGCGTCACGAGCTTGAATGTTAATA
ATTGGGGTAGGAATTCTTTTGACTTTTCACACATAGGACGTGGATTTGATTATGATTGGTGCTGGAATCTCTAG
Protein sequenceShow/hide protein sequence
MESVAAGVGLGAAEDVSSTTLFSRWSHAVSRRYQHLLDKCTPYIFYRWTACFFITFIYVLRVYLIEGFYIVSYGLGIYILNLLIGFLSPQVDPEILDLHQGPALPLRESD
EFRPFVRRLPEFKFCVTSLNVNNWGRNSFDFSHIGRGFDYDWCWNL