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Lsi01G009560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G009560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein RER1
Genome locationchr01:7763021..7764514
RNA-Seq ExpressionLsi01G009560
SyntenyLsi01G009560
Gene Ontology termsGO:0051179 - localization (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domainsIPR004932 - Retrieval of early ER protein Rer1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034324.1 Protein RER1A [Cucurbita argyrosperma subsp. argyrosperma]4.9e-3294.87Show/hide
Query:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQSDTKSLLKD
        YSITKAFCIAF+MTFFSAFDVPVFWPILLFYWVVLFTLTMRRQI HMIKYKYVPFSFGKQRYDGK AA SDTKSLLKD
Subjt:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQSDTKSLLKD

XP_022949760.1 protein RER1A-like [Cucurbita moschata]4.9e-3294.87Show/hide
Query:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQSDTKSLLKD
        YSITKAFCIAF+MTFFSAFDVPVFWPILLFYWVVLFTLTMRRQI HMIKYKYVPFSFGKQRYDGK AA SDTKSLLKD
Subjt:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQSDTKSLLKD

XP_022977598.1 protein RER1A-like [Cucurbita maxima]4.9e-3294.87Show/hide
Query:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQSDTKSLLKD
        YSITKAFCIAF+MTFFSAFDVPVFWPILLFYWVVLFTLTMRRQI HMIKYKYVPFSFGKQRYDGK AA SDTKSLLKD
Subjt:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQSDTKSLLKD

XP_023544323.1 protein RER1A-like [Cucurbita pepo subsp. pepo]4.9e-3294.87Show/hide
Query:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQSDTKSLLKD
        YSITKAFCIAF+MTFFSAFDVPVFWPILLFYWVVLFTLTMRRQI HMIKYKYVPFSFGKQRYDGK AA SDTKSLLKD
Subjt:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQSDTKSLLKD

XP_038880923.1 protein RER1A-like [Benincasa hispida]1.4e-3193.59Show/hide
Query:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQSDTKSLLKD
        YSITKAFCIAF+MTFF+AFDVPVFWPILLFYWVVLFTLTMRRQI HMIKYKYVPFSFGKQRYDGK AA SDTKSLLKD
Subjt:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQSDTKSLLKD

TrEMBL top hitse value%identityAlignment
A0A6J1BTU8 Protein RER15.8e-3191.03Show/hide
Query:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQSDTKSLLKD
        YSITKAFCIAF+MTFFSAFDVPVFWPILLFYWVVLFTLTMRRQI HMIKYKYVPFSFGKQRYDGK AA S+ KS+LKD
Subjt:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQSDTKSLLKD

A0A6J1GCX4 Protein RER12.4e-3294.87Show/hide
Query:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQSDTKSLLKD
        YSITKAFCIAF+MTFFSAFDVPVFWPILLFYWVVLFTLTMRRQI HMIKYKYVPFSFGKQRYDGK AA SDTKSLLKD
Subjt:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQSDTKSLLKD

A0A6J1HHE0 Protein RER11.1e-2989.87Show/hide
Query:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGK-AAAQSDTKSLLKD
        YSITKAFCIAF+MTFFSAFDVPVFWPILLFYWVVLFTLTMRRQI HMIKYKYVPFSFGKQRYDGK A+A S+T +LLKD
Subjt:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGK-AAAQSDTKSLLKD

A0A6J1IRU9 Protein RER12.4e-3294.87Show/hide
Query:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQSDTKSLLKD
        YSITKAFCIAF+MTFFSAFDVPVFWPILLFYWVVLFTLTMRRQI HMIKYKYVPFSFGKQRYDGK AA SDTKSLLKD
Subjt:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQSDTKSLLKD

A0A6J1KTW6 Protein RER12.4e-2988.61Show/hide
Query:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGK-AAAQSDTKSLLKD
        YSITKAFCIAF+MTFFSAFDVPVFWPILLFYWVVLFTLTMRRQI HMIKYKYVPFSFGKQRYDGK A++ S+T +LLKD
Subjt:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGK-AAAQSDTKSLLKD

SwissProt top hitse value%identityAlignment
O15258 Protein RER13.9e-1658.82Show/hide
Query:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAA
        ++ TK   +A V TFF AF+VPVFWPIL+ Y+++LF +TM+RQI HMIKY+Y+PF+ GK+RY GK  A
Subjt:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAA

O48670 Protein RER1A9.2e-2678.57Show/hide
Query:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQS
        YS+TKAFCIAF+MTFFS FDVPVFWPILL YW+VLF LTMRRQI HMIKYKY+PFSFGKQ+Y G++++ S
Subjt:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQS

O48671 Protein RER1B3.0e-2477.94Show/hide
Query:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAA
        YS+TKAFCIAF+MTFFS FDVPVFWPILL YWVVLF LTMRRQI HMIK+KY+PFS GKQ+Y G+ ++
Subjt:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAA

Q5R5U4 Protein RER13.9e-1658.82Show/hide
Query:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAA
        ++ TK   +A V TFF AF+VPVFWPIL+ Y+++LF +TM+RQI HMIKY+Y+PF+ GK+RY GK  A
Subjt:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAA

Q9ZWI7 Protein RER1C1.5e-2074.24Show/hide
Query:  SITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAA
        SI +AF I F+MTFF  FDVPVFWPILLFYWV+LF LTMR+QI HMIKY+YVPFSFGK++Y  K A
Subjt:  SITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAA

Arabidopsis top hitse value%identityAlignment
AT2G18240.1 Rer1 family protein6.2e-1769.49Show/hide
Query:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGK
        Y+ TKAF +AFVMTFFS  DVPVFWPILL YW+VL++LTM+R IVHM KY+Y PF   K
Subjt:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGK

AT2G21600.1 endoplasmatic reticulum retrieval protein 1B2.1e-2577.94Show/hide
Query:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAA
        YS+TKAFCIAF+MTFFS FDVPVFWPILL YWVVLF LTMRRQI HMIK+KY+PFS GKQ+Y G+ ++
Subjt:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAA

AT2G23310.1 Rer1 family protein1.1e-2174.24Show/hide
Query:  SITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAA
        SI +AF I F+MTFF  FDVPVFWPILLFYWV+LF LTMR+QI HMIKY+YVPFSFGK++Y  K A
Subjt:  SITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAA

AT2G23310.2 Rer1 family protein2.7e-2074.24Show/hide
Query:  SITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAA
        SI +AF I F+MTFF  FDVPVFWPILLFYWV+LF LTMR+QI HMIKY+YVPFSFGK +Y  K A
Subjt:  SITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAA

AT4G39220.1 Rer1 family protein6.6e-2778.57Show/hide
Query:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQS
        YS+TKAFCIAF+MTFFS FDVPVFWPILL YW+VLF LTMRRQI HMIKYKY+PFSFGKQ+Y G++++ S
Subjt:  YSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTACTCTATCACAAAAGCCTTTTGTATTGCTTTTGTGATGACATTCTTTAGTGCATTTGATGTGCCTGTATTTTGGCCTATCCTTCTATTTTACTGGGTGGTGCT
GTTCACTCTCACCATGCGGAGACAGATAGTGCACATGATCAAATATAAATATGTCCCGTTCTCGTTTGGTAAACAGCGATATGATGGAAAGGCTGCTGCTCAAAGCGACA
CTAAGAGCCTTCTGAAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGTACTCTATCACAAAAGCCTTTTGTATTGCTTTTGTGATGACATTCTTTAGTGCATTTGATGTGCCTGTATTTTGGCCTATCCTTCTATTTTACTGGGTGGTGCT
GTTCACTCTCACCATGCGGAGACAGATAGTGCACATGATCAAATATAAATATGTCCCGTTCTCGTTTGGTAAACAGCGATATGATGGAAAGGCTGCTGCTCAAAGCGACA
CTAAGAGCCTTCTGAAGGATTGAACTATTTGGATAGAACTGCTAAACTCTTTTTATTCTGTTAAGTAGAACTGCTAAACTCTTTTTATTCTGCTGTATTCTTGTTCATAG
TTAGTTCTACATGAGGAGAAGGTGGTAAGAGATAATTGTAATGAAGATAAGTTAGGCTGATCATTTGTTGGTTCTTCATTTCCCCTGATCTTTGTACTTCTTTGGATGTT
CCTATGGAAAATCAAGTTTCAGGAAGATATTATGGTTGCTGAATTGTTCCCTTCTCTCCATGACATATTTTTTAGTTGTAAAGATGGAAAAATTACTGTAGTCTCAATCA
CCTGTAAGAAAACCTAAATTAAAACCATCTAATTTTTTAGAGCTTGTTGTACTAAGAAGCCATTTCTGAAGTAGAAAGAAAAAGAAAAAGAAAGAACAGAGGAGGGATAA
AAGCCACTGGTTTTGTTAGGCAAGAACGATCTCAGATTTTACCATAAGGATTTTTGTCCTTTTTTTAGTAGGAATTGGGAGATTTGAACCTTCGACTTCAAAGAAAGTAA
TTT
Protein sequenceShow/hide protein sequence
MMYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVVLFTLTMRRQIVHMIKYKYVPFSFGKQRYDGKAAAQSDTKSLLKD