; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G009580 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G009580
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:7765479..7771470
RNA-Seq ExpressionLsi01G009580
SyntenyLsi01G009580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A8Y7N5 Uncharacterized protein9.9e-0423.55Show/hide
Query:  VKLQSQATSFNGDANWLVSNGLLQCFLVIRKDILVSVDVNNL-----GIFLREML--EIKI------------------------------QPINKLLFR
        V+L+  A   +GDA+ LV   L Q  LV+ + +LV  D ++L     G+ +   L  E+++                                +++LL R
Subjt:  VKLQSQATSFNGDANWLVSNGLLQCFLVIRKDILVSVDVNNL-----GIFLREML--EIKI------------------------------QPINKLLFR

Query:  ERDEFSSNDLIYAFNSCYGRECPTTPCFPQQQKHLTLVGSLRLIFKKLTATSLIFDWSNGTSGPPINRFRQPIAVVDGV--SAAGGLCLHDSSSRGRPSP
        +R +   +D + A +  + RE P                         TA  L+    + +  PP++R    +A    V   AA G  +  +++ G    
Subjt:  ERDEFSSNDLIYAFNSCYGRECPTTPCFPQQQKHLTLVGSLRLIFKKLTATSLIFDWSNGTSGPPINRFRQPIAVVDGV--SAAGGLCLHDSSSRGRPSP

Query:  QIHSPILVVGQIGELVQSNLIRAILRIMIIDKVQIILEDLKPLLPLFDSVIGLAVLRQP
        ++    LVVG++GELV++  + A L + ++D ++++LE L+P+  L ++ + LAVL  P
Subjt:  QIHSPILVVGQIGELVQSNLIRAILRIMIIDKVQIILEDLKPLLPLFDSVIGLAVLRQP
J3M227 Uncharacterized protein1.5e-0432.43Show/hide
Query:  LTATSLIFDWSNGTSGPPINRFRQPIAVVDGVSAAGGLCLHDSSSRGRPSPQIHSPILVVGQIGELVQSNLIRAIL----RIMIIDKVQIILEDLKPLLP
        LT  SL+ +  +G  GPP+N  RQ + VV G   AG L L     R  P  ++   +L+VG++GE V++   R       R++++D  +++ E   P L 
Subjt:  LTATSLIFDWSNGTSGPPINRFRQPIAVVDGVSAAGGLCLHDSSSRGRPSPQIHSPILVVGQIGELVQSNLIRAIL----RIMIIDKVQIILEDLKPLLP

Query:  LFDSVIGLAVLRQPQVIDFSNLAVAPAAECGGGNGKEE-EGEEGEQRG
        L D+V+ LAVLR P  +    L +AP       + +    G++ +QRG
Subjt:  LFDSVIGLAVLRQPQVIDFSNLAVAPAAECGGGNGKEE-EGEEGEQRG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGTAGTAGCGATTCACATCCTCAGACAATTGGGACAAATAGCTATCATTGATGTCATAAACTACCTCTTGACAGAGACGATTGAAAAGGTCTGCAACCTCCTCAT
CACTACCAAGCCAATGCTCTATTATTCCACAGTAATGGAGACCGGAGGAGACTTCGCCGAAAAACATCGAGGCAATGAAGTCCGTCTTGATAACCAAGCGGGTCACCAAG
CTGAAGCTCTATCAGCCGATCCAATACAAACAGGGGCACCTGATTTTCTAGCATTATCATATCCCTCTGGATCGAATGCATTGAGCCACGCATTGCGAAGATTGGATCAT
TTCGAGGATACCCAAGATGTGGTAAAGCGACCGCCATTTATGGCGTTCCATTTGCCGGAGCCGGCGCTTTCCATGGTGGTAAGTAGCCATCCTCACCCCATTCTGTGCCC
CATGAGTTCCTTACAAGCCAATAATCAACTCCGTTCTCTGTGCCGTAACCAACAGCGACGACACCATGGTCGAGAGCTGAGCCACATTTACCATTTAAAAAGTATATGTG
TGTCAGAGAAGTTTGCTCACCGACTGGTAAAGTTGCAAAGCCAAGCCACCAGCTTCAATGGCGACGCTAACTGGTTGGTGAGCAATGGCCTTCTTCAATGCTTCCTCGTC
ATTCGCAAGGACATCCTCGTATCCGTCGATGTTAACAACCTTGGCATTTTTCTGAGAGAGATGTTGGAAATCAAAATTCAGCCAATTAACAAGCTCTTGTTCAGAGAGAG
AGATGAGTTCTCCAGTAACGATCTGATTTATGCCTTCAACAGCTGCTATGGTCGAGAATGCCCAACAACTCCCTGTTTCCCCCAACAACAGAAACATCTCACATTAGTGG
GCTCACTTCGGTTGATATTTAAAAAACTCACCGCAACTTCCTTGATTTTTGACTGGAGCAACGGCACCTCTGGACCTCCAATCAACAGATTCCGGCAACCGATCGCGGTT
GTTGACGGCGTATCGGCGGCTGGCGGACTTTGCCTTCATGACTCGTCGAGCAGGGGGAGACCTAGTCCCCAAATACACAGCCCGATACTCGTCGTTGGTCAGATCGGCGA
ACTTGTTCAATCCAACCTTATACGTGCGATTCTCAGAATTATGATCATCGATAAAGTTCAGATTATCCTTGAAGATCTGAAACCTCTTCTCCCGCTCTTCGATTCCGTTA
TAGGCCTTGCCGTGCTTCGCCAGCCACAGGTCATAGATTTCTCTAACCTCGCCGTCGCTCCGGCGGCTGAGTGCGGAGGCGGAAATGGAAAGGAAGAAGAAGGAGAGGAG
GGCGAGCAAAGAGGGGGCGGCGGCCATGGCGAAGGTTGCTTCAAGAACAGGGAAGATTGTTCGATTCTGAGTTATGGAGAAAGTGGGGAAGTGGCTATGGGTATTTATAG
CCTAAAGGAACTCAAAAGTGAGGGGAAATTTTTTCCCACTGATATGGGTTTAGTTTAA
mRNA sequenceShow/hide mRNA sequence
GGCAACTCCATCATAAGATAACCAAAATGAAAACTTTGGTATTACAAATCCAATAACACAGTTCCATCAGCAATTTGAACTTTCCAAGAAATTAGAAAATCGATCCAATA
AATAATAGAGAGAGAGAAGAAACAATCGTAAAACAGAGGCTTTTTATGAGATAGAGATAGGGTAGGTTCTGAGTTGTGAGTTGTGAGTTGTGAGTCAATTTGGGGGCTTG
TAATAAGCATAAACTCCATAGAAGGCTTGTGCAAAAGTAAGCAACAAAAGAACTACTGCTGCAACCAAAGAGATAATGGCCCATGGATTGCTGAAGTAGTTGTGTTTTAA
AGTTGCTCTCCAAGCATTCCATCTATGGTTGTAGTAGCGATTCACATCCTCAGACAATTGGGACAAATAGCTATCATTGATGTCATAAACTACCTCTTGACAGAGACGAT
TGAAAAGGTCTGCAACCTCCTCATCACTACCAAGCCAATGCTCTATTATTCCACAGTAATGGAGACCGGAGGAGACTTCGCCGAAAAACATCGAGGCAATGAAGTCCGTC
TTGATAACCAAGCGGGTCACCAAGCTGAAGCTCTATCAGCCGATCCAATACAAACAGGGGCACCTGATTTTCTAGCATTATCATATCCCTCTGGATCGAATGCATTGAGC
CACGCATTGCGAAGATTGGATCATTTCGAGGATACCCAAGATGTGGTAAAGCGACCGCCATTTATGGCGTTCCATTTGCCGGAGCCGGCGCTTTCCATGGTGGTAAGTAG
CCATCCTCACCCCATTCTGTGCCCCATGAGTTCCTTACAAGCCAATAATCAACTCCGTTCTCTGTGCCGTAACCAACAGCGACGACACCATGGTCGAGAGCTGAGCCACA
TTTACCATTTAAAAAGTATATGTGTGTCAGAGAAGTTTGCTCACCGACTGGTAAAGTTGCAAAGCCAAGCCACCAGCTTCAATGGCGACGCTAACTGGTTGGTGAGCAAT
GGCCTTCTTCAATGCTTCCTCGTCATTCGCAAGGACATCCTCGTATCCGTCGATGTTAACAACCTTGGCATTTTTCTGAGAGAGATGTTGGAAATCAAAATTCAGCCAAT
TAACAAGCTCTTGTTCAGAGAGAGAGATGAGTTCTCCAGTAACGATCTGATTTATGCCTTCAACAGCTGCTATGGTCGAGAATGCCCAACAACTCCCTGTTTCCCCCAAC
AACAGAAACATCTCACATTAGTGGGCTCACTTCGGTTGATATTTAAAAAACTCACCGCAACTTCCTTGATTTTTGACTGGAGCAACGGCACCTCTGGACCTCCAATCAAC
AGATTCCGGCAACCGATCGCGGTTGTTGACGGCGTATCGGCGGCTGGCGGACTTTGCCTTCATGACTCGTCGAGCAGGGGGAGACCTAGTCCCCAAATACACAGCCCGAT
ACTCGTCGTTGGTCAGATCGGCGAACTTGTTCAATCCAACCTTATACGTGCGATTCTCAGAATTATGATCATCGATAAAGTTCAGATTATCCTTGAAGATCTGAAACCTC
TTCTCCCGCTCTTCGATTCCGTTATAGGCCTTGCCGTGCTTCGCCAGCCACAGGTCATAGATTTCTCTAACCTCGCCGTCGCTCCGGCGGCTGAGTGCGGAGGCGGAAAT
GGAAAGGAAGAAGAAGGAGAGGAGGGCGAGCAAAGAGGGGGCGGCGGCCATGGCGAAGGTTGCTTCAAGAACAGGGAAGATTGTTCGATTCTGAGTTATGGAGAAAGTGG
GGAAGTGGCTATGGGTATTTATAGCCTAAAGGAACTCAAAAGTGAGGGGAAATTTTTTCCCACTGATATGGGTTTAGTTTAA
Protein sequenceShow/hide protein sequence
MVVVAIHILRQLGQIAIIDVINYLLTETIEKVCNLLITTKPMLYYSTVMETGGDFAEKHRGNEVRLDNQAGHQAEALSADPIQTGAPDFLALSYPSGSNALSHALRRLDH
FEDTQDVVKRPPFMAFHLPEPALSMVVSSHPHPILCPMSSLQANNQLRSLCRNQQRRHHGRELSHIYHLKSICVSEKFAHRLVKLQSQATSFNGDANWLVSNGLLQCFLV
IRKDILVSVDVNNLGIFLREMLEIKIQPINKLLFRERDEFSSNDLIYAFNSCYGRECPTTPCFPQQQKHLTLVGSLRLIFKKLTATSLIFDWSNGTSGPPINRFRQPIAV
VDGVSAAGGLCLHDSSSRGRPSPQIHSPILVVGQIGELVQSNLIRAILRIMIIDKVQIILEDLKPLLPLFDSVIGLAVLRQPQVIDFSNLAVAPAAECGGGNGKEEEGEE
GEQRGGGGHGEGCFKNREDCSILSYGESGEVAMGIYSLKELKSEGKFFPTDMGLV