; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G010140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G010140
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionB3 domain-containing transcription factor VRN1-like isoform X2
Genome locationchr01:8411419..8413973
RNA-Seq ExpressionLsi01G010140
SyntenyLsi01G010140
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647490.1 hypothetical protein Csa_003352 [Cucumis sativus]3.9e-8044.34Show/hide
Query:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF
        MASPPKFFK+LL +N+E PKLMIP+MF+K YGKLLSSSVILKLPDG EWK+GLTT+ NGAVWL+KGWD+FS+HYCLE+G LLVFKLL+ RG SS +V+IF
Subjt:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF

Query:  DSTGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGC
        ++T +ET+YS NV + T + D   SDSD S ESF  HSKKR KAS+P R+  K+  K++ FSIKTEPEE                            E C
Subjt:  DSTGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGC

Query:  SIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFN----------------------------------------------
        +IFSDIP        +++VEISR+ + LKN+ ES +K GFKVVMSQSNVGGRFN                                              
Subjt:  SIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFN----------------------------------------------

Query:  ---------------------------------------------------------------------MNIPMAFAKEHFSAEMYFAKLQVRNKEWNVT
                                                                             +NIP+ FA +HFS EM+ AKLQV NKEW V 
Subjt:  ---------------------------------------------------------------------MNIPMAFAKEHFSAEMYFAKLQVRNKEWNVT

Query:  LKQYESYVRFSTGWSNVFHENDLRDGDTCLFEM
        LKQY ++ RFS GWS  + EN LRDG+TCLFEM
Subjt:  LKQYESYVRFSTGWSNVFHENDLRDGDTCLFEM

TYK12921.1 B3 domain-containing transcription factor VRN1-like isoform X2 [Cucumis melo var. makuwa]3.8e-8345.27Show/hide
Query:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF
        MAS PKFFK+LL +NIE PKLMIP+MF+KDYGK LS+ VIL+LPDG EWKVGLT   NG+VWLQ+GWD+FS+HYCLE+G LLVFKLLD RG SS +V+IF
Subjt:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF

Query:  DSTGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGC
        D+T +ETQYS NVN+ T + D   SDSD S ES R HSKKRKK SLP R+  K+  +++ F IKTEPEE                            EGC
Subjt:  DSTGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGC

Query:  SIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFN----------------------------------------------
        +IFSDIP        +++VEISR+R+ LKN+ ES +K GFKVVMS+SNVGGRFN                                              
Subjt:  SIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFN----------------------------------------------

Query:  ---------------------------------------------------------------------MNIPMAFAKEHFSAEMYFAKLQVRNKEWNVT
                                                                             +NIP+ FAKEHFS EM++AKLQVRNKEW VT
Subjt:  ---------------------------------------------------------------------MNIPMAFAKEHFSAEMYFAKLQVRNKEWNVT

Query:  LKQYESYVRFSTGWSNVFHENDLRDGDTCLFEM
        LKQY ++ R S GWS  +HEN LRDG+TCLFEM
Subjt:  LKQYESYVRFSTGWSNVFHENDLRDGDTCLFEM

XP_011657840.1 B3 domain-containing transcription factor VRN1 isoform X1 [Cucumis sativus]3.9e-8044.34Show/hide
Query:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF
        MASPPKFFK+LL +N+E PKLMIP+MF+K YGKLLSSSVILKLPDG EWK+GLTT+ NGAVWL+KGWD+FS+HYCLE+G LLVFKLL+ RG SS +V+IF
Subjt:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF

Query:  DSTGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGC
        ++T +ET+YS NV + T + D   SDSD S ESF  HSKKR KAS+P R+  K+  K++ FSIKTEPEE                            E C
Subjt:  DSTGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGC

Query:  SIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFN----------------------------------------------
        +IFSDIP        +++VEISR+ + LKN+ ES +K GFKVVMSQSNVGGRFN                                              
Subjt:  SIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFN----------------------------------------------

Query:  ---------------------------------------------------------------------MNIPMAFAKEHFSAEMYFAKLQVRNKEWNVT
                                                                             +NIP+ FA +HFS EM+ AKLQV NKEW V 
Subjt:  ---------------------------------------------------------------------MNIPMAFAKEHFSAEMYFAKLQVRNKEWNVT

Query:  LKQYESYVRFSTGWSNVFHENDLRDGDTCLFEM
        LKQY ++ RFS GWS  + EN LRDG+TCLFEM
Subjt:  LKQYESYVRFSTGWSNVFHENDLRDGDTCLFEM

XP_031742404.1 B3 domain-containing transcription factor VRN1 isoform X2 [Cucumis sativus]1.5e-7944.11Show/hide
Query:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF
        MASPPKFFK+LL +N+E PKLMIP+MF+K YGKLLSSSVILKLPDG EWK+GLTT+ NGAVWL+KGWD+FS+HYCLE+G LLVFKLL+ RG SS +V+IF
Subjt:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF

Query:  DSTGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGC
        ++T +ET+YS NV + T + D   SDSD S ESF  HSKKR KAS+P R+  K+  K++ FSIKTEPEE +                            C
Subjt:  DSTGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGC

Query:  SIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFN----------------------------------------------
        +IFSDIP        +++VEISR+ + LKN+ ES +K GFKVVMSQSNVGGRFN                                              
Subjt:  SIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFN----------------------------------------------

Query:  ---------------------------------------------------------------------MNIPMAFAKEHFSAEMYFAKLQVRNKEWNVT
                                                                             +NIP+ FA +HFS EM+ AKLQV NKEW V 
Subjt:  ---------------------------------------------------------------------MNIPMAFAKEHFSAEMYFAKLQVRNKEWNVT

Query:  LKQYESYVRFSTGWSNVFHENDLRDGDTCLFEM
        LKQY ++ RFS GWS  + EN LRDG+TCLFEM
Subjt:  LKQYESYVRFSTGWSNVFHENDLRDGDTCLFEM

XP_031742405.1 B3 domain-containing transcription factor VRN1 isoform X3 [Cucumis sativus]2.9e-7553.11Show/hide
Query:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF
        MASPPKFFK+LL +N+E PKLMIP+MF+K YGKLLSSSVILKLPDG EWK+GLTT+ NGAVWL+KGWD+FS+HYCLE+G LLVFKLL+ RG SS +V+IF
Subjt:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF

Query:  DSTGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGC
        ++T +ET+YS NV + T + D   SDSD S ESF  HSKKR KAS+P R+  K+  K++ FSIKTEPEE                            E C
Subjt:  DSTGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGC

Query:  SIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQVRN-KEWNVTLKQYES---YVRFS
        +IFSDIP        +++VEISR+ + LKN+ ES +K GFKVVMSQSNVGGRFN+     FA ++ S E+    +Q  N K+W++  K  ES       S
Subjt:  SIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQVRN-KEWNVTLKQYES---YVRFS

Query:  TGWSNVFHENDLRDGDTCLFEM
         GW +   EN L+ GD   FE+
Subjt:  TGWSNVFHENDLRDGDTCLFEM

TrEMBL top hitse value%identityAlignment
A0A0A0KG44 Uncharacterized protein6.4e-6839.32Show/hide
Query:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF
        M S PKFF+++L  N+E PK+MIPK FV+DYGKLLS+SV LKL DG EW+VGL  A NGAVWL++GWD+FS+HYCLEFG LLVFKL DGR +S+ +V+IF
Subjt:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF

Query:  DSTGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHS--KKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAE
        D TGVET++   ++      ++S+SDSDESLES   H   KKRK  S+ C QS +++ K + F++KTE EEE+     K                     
Subjt:  DSTGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHS--KKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAE

Query:  GCSIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAE--------STDKPGFKVVMSQSNVGGRFNM-----------------------------------
           IF +IP CK+R+  + + ++SRK Q    K E        S  KP F+VVM QSNV GRFNM                                   
Subjt:  GCSIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAE--------STDKPGFKVVMSQSNVGGRFNM-----------------------------------

Query:  -----------------------------------------------------------------------------NIPMAFAKEHFSAEMYFAKLQVR
                                                                                     NIP+ FA ++FS EM+ A LQV 
Subjt:  -----------------------------------------------------------------------------NIPMAFAKEHFSAEMYFAKLQVR

Query:  NKEWNVTLKQYESYVRFSTGWSNVFHENDLRDGDTCLFEM
        NK+WNV LKQYESYVRFS+GW     EN L+DGD CLFEM
Subjt:  NKEWNVTLKQYESYVRFSTGWSNVFHENDLRDGDTCLFEM

A0A0A0KJE0 Uncharacterized protein1.0e-6545.4Show/hide
Query:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF
        M+S PKFF+M+LQ N++ PKLMIPK FV+DYGK LS+ V LKL DG+EWKVGL  A NGA+WL+KGWD+FS+HYCLEFGSLL+F LL+GR +S+ EV+IF
Subjt:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF

Query:  DSTGVETQYSCNVNNCTTQSDD------SNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYV
        D TGVET+Y  +       SD       S SDSDES ESFR HSKKRK A +PC  + K++ K  S +IK EP +            +   ++C+     
Subjt:  DSTGVETQYSCNVNNCTTQSDD------SNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYV

Query:  LIAEGCSIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTD--------KPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQVRN-KEWNVT
              ++  + P+CKKR+  + +V+ SRK+Q    K E+T         KP FKVVM ++NV GRFNM IP  FA ++ S E     LQ+ N + W + 
Subjt:  LIAEGCSIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTD--------KPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQVRN-KEWNVT

Query:  LK----QYESYVRFSTGWSNVFHENDLRDGDTCLFEM
         K       ++   S+GW +   +N L++GD  LF++
Subjt:  LK----QYESYVRFSTGWSNVFHENDLRDGDTCLFEM

A0A0A0KL64 Uncharacterized protein1.9e-8044.34Show/hide
Query:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF
        MASPPKFFK+LL +N+E PKLMIP+MF+K YGKLLSSSVILKLPDG EWK+GLTT+ NGAVWL+KGWD+FS+HYCLE+G LLVFKLL+ RG SS +V+IF
Subjt:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF

Query:  DSTGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGC
        ++T +ET+YS NV + T + D   SDSD S ESF  HSKKR KAS+P R+  K+  K++ FSIKTEPEE                            E C
Subjt:  DSTGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGC

Query:  SIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFN----------------------------------------------
        +IFSDIP        +++VEISR+ + LKN+ ES +K GFKVVMSQSNVGGRFN                                              
Subjt:  SIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFN----------------------------------------------

Query:  ---------------------------------------------------------------------MNIPMAFAKEHFSAEMYFAKLQVRNKEWNVT
                                                                             +NIP+ FA +HFS EM+ AKLQV NKEW V 
Subjt:  ---------------------------------------------------------------------MNIPMAFAKEHFSAEMYFAKLQVRNKEWNVT

Query:  LKQYESYVRFSTGWSNVFHENDLRDGDTCLFEM
        LKQY ++ RFS GWS  + EN LRDG+TCLFEM
Subjt:  LKQYESYVRFSTGWSNVFHENDLRDGDTCLFEM

A0A1S3B0K5 B3 domain-containing transcription factor VRN1-like1.3e-6839.35Show/hide
Query:  TMASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSI
        TM+S PKFF+M+LQ N++ PKLMIPK FV+DYGK+LS+SV LKL DG EWKVGL TA NGAVWL+KGWD+FS+HYCLEFGSLL+F LLDGR +S   V+I
Subjt:  TMASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSI

Query:  FDSTGVETQY--------------------SCNVNNCTTQSD-DSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKA
        FD TGVET+Y                    S +  N  T SD +++SDSDES ESFR HSKKRK  S+PC QS +++ K +SF+IKTEP E +  +  + 
Subjt:  FDSTGVETQY--------------------SCNVNNCTTQSD-DSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKA

Query:  MVLSNSFKKCSEKNYVLIAEGCSIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTD--------KPGFKVVMSQSNVGGRFNM---------------
               ++C+            I  +  + KKR+  + +V++SRK+Q    K E+T         KP FKVVM +SNV GRF M               
Subjt:  MVLSNSFKKCSEKNYVLIAEGCSIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTD--------KPGFKVVMSQSNVGGRFNM---------------

Query:  -------------------------------------------------------------------------------------------------NIP
                                                                                                         NIP
Subjt:  -------------------------------------------------------------------------------------------------NIP

Query:  MAFAKEHFSAEMYFAKLQVRNKEWNVTLKQYESYVRFSTGWSNVFHENDLRDGDTCLFEM
          FA+ +FS +M  A LQV NK+W+V LKQYES  RFS+GW     EN L DGDTCLFEM
Subjt:  MAFAKEHFSAEMYFAKLQVRNKEWNVTLKQYESYVRFSTGWSNVFHENDLRDGDTCLFEM

A0A5D3CM75 B3 domain-containing transcription factor VRN1-like isoform X21.8e-8345.27Show/hide
Query:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF
        MAS PKFFK+LL +NIE PKLMIP+MF+KDYGK LS+ VIL+LPDG EWKVGLT   NG+VWLQ+GWD+FS+HYCLE+G LLVFKLLD RG SS +V+IF
Subjt:  MASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIF

Query:  DSTGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGC
        D+T +ETQYS NVN+ T + D   SDSD S ES R HSKKRKK SLP R+  K+  +++ F IKTEPEE                            EGC
Subjt:  DSTGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGC

Query:  SIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFN----------------------------------------------
        +IFSDIP        +++VEISR+R+ LKN+ ES +K GFKVVMS+SNVGGRFN                                              
Subjt:  SIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFN----------------------------------------------

Query:  ---------------------------------------------------------------------MNIPMAFAKEHFSAEMYFAKLQVRNKEWNVT
                                                                             +NIP+ FAKEHFS EM++AKLQVRNKEW VT
Subjt:  ---------------------------------------------------------------------MNIPMAFAKEHFSAEMYFAKLQVRNKEWNVT

Query:  LKQYESYVRFSTGWSNVFHENDLRDGDTCLFEM
        LKQY ++ R S GWS  +HEN LRDG+TCLFEM
Subjt:  LKQYESYVRFSTGWSNVFHENDLRDGDTCLFEM

SwissProt top hitse value%identityAlignment
Q10GM3 B3 domain-containing protein Os03g06222001.5e-0524.13Show/hide
Query:  LMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIFDSTGVETQYSCNVNNCTTQS
        + +P  F  ++   +S  V L+ P G  W +G+  +  G + LQ GW EF D   +E G  L+F+      +SS +V IFD +G E      V +     
Subjt:  LMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIFDSTGVETQYSCNVNNCTTQS

Query:  DDSNSDSDESLESFRR--------HSKKRKKASLPCRQSCK---RITKKESFSIKTEPEEED-IFSHVKAMVLSNSFKKCSEKNYVLIAEGCSIFSDIPN
         ++++ +++   + RR        +  +        R SC+   R  K+  FS +TE +E D     V A      + +     +  +AE          
Subjt:  DDSNSDSDESLESFRR--------HSKKRKKASLPCRQSCK---RITKKESFSIKTEPEEED-IFSHVKAMVLSNSFKKCSEKNYVLIAEGCSIFSDIPN

Query:  CKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGR--FNMNIPMAFAKEHFSAEMYFAKLQ--VRNKEWNVTLKQYESYVRF-STGWSNVF
            + +ED  EISR    ++        P F  V+  S+V       + +   FA ++  A      L+   R  EW+V     ++   F   GW    
Subjt:  CKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGR--FNMNIPMAFAKEHFSAEMYFAKLQ--VRNKEWNVTLKQYESYVRF-STGWSNVF

Query:  HENDLRDGDTCLFEM
         +N L   D CLFE+
Subjt:  HENDLRDGDTCLFEM

Q851V5 Putative B3 domain-containing protein Os03g06216001.2e-0724.38Show/hide
Query:  FFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIFDSTGVE
        FFK+++    E  +++IP  F++ +   +  ++ L+L DG  + V +T    G + LQ GW  F   + L+ G  LVF      G S L+V IF  +G E
Subjt:  FFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIFDSTGVE

Query:  TQYS----CNVNNCTTQSDD----SNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAE
          +S     N  +C  + ++    S++  D  ++S +  SK  K+                        E+E+  ++++ + L                +
Subjt:  TQYS----CNVNNCTTQSDD----SNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAE

Query:  GCSIFSDIPNCKKRMPKEDDVEISRKRQGLKNK--AESTDKPGFKVVMSQSNVGGRF-NMNIPMAFAKEHFSAEMYFAKLQVRNKEWNVTLKQYESYV-R
        G  + + I      +PK   +   +K+Q L++K  A  ++ P +  ++ +S V G+   ++I   +A  +   +     LQ   K W V  +  ++   R
Subjt:  GCSIFSDIPNCKKRMPKEDDVEISRKRQGLKNK--AESTDKPGFKVVMSQSNVGGRF-NMNIPMAFAKEHFSAEMYFAKLQVRNKEWNVTLKQYESYV-R

Query:  FSTGWSNVFHENDLRDGDTCLFEM
         STGWS    EN+L+ GD CLFE+
Subjt:  FSTGWSNVFHENDLRDGDTCLFEM

Q8L3W1 B3 domain-containing transcription factor VRN13.1e-1926.75Show/hide
Query:  PKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIFDSTG
        P F K++  S I+  +L +P  FV  +   LS +V L +PDG  W+VGL  A N  +W Q GW EF D Y +  G LL+F+     GNS+  V IF+ + 
Subjt:  PKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIFDSTG

Query:  VETQYSC-----NVNNCTTQS---DDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLI
         E  Y       + +N   ++   +D   +  E +     +     ++++P  +       +  F+   + EE       K        KK ++   +  
Subjt:  VETQYSC-----NVNNCTTQS---DDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLI

Query:  A-------EGCSIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQVRNKEWNVTLKQY
        +       E  S F +  + +KR    ++    R+R     K      P F+VV+  S +     M +P  FA+++ S    F K+Q+  K+W V     
Subjt:  A-------EGCSIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQVRNKEWNVTLKQY

Query:  ESYVRFSTGWSNVFHENDLRDGDTCLFEM
            +FS GW     EN+L +GD C+FE+
Subjt:  ESYVRFSTGWSNVFHENDLRDGDTCLFEM

Q8RYD1 B3 domain-containing protein REM161.2e-1025.4Show/hide
Query:  KLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIFD-STGVETQYSCNVNNCTT
        +L+IP+ F     + L   V LK P G+ + VG+       +  + GWD+F   + LE   LLVFK     G S  EV +FD  T  E   S  V  C  
Subjt:  KLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIFD-STGVETQYSCNVNNCTT

Query:  QSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGCSIFSDIPNCKKRMPKED-
                          H++K K +     Q                  EE I S +     S      S  + V ++EG    S     ++ +  ++ 
Subjt:  QSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGCSIFSDIPNCKKRMPKED-

Query:  ----DVEI-----SRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQVRNKEWNVTLKQY--ESYVRFSTGWSNVFHEN
            DVE+     ++K   L  +A S D  GF V M +S+V  +  + IP  +  ++         +QV   +W +    +        STGW     +N
Subjt:  ----DVEI-----SRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQVRNKEWNVTLKQY--ESYVRFSTGWSNVFHEN

Query:  DLRDGDTCLFE
        +LR+GD C+FE
Subjt:  DLRDGDTCLFE

Q9FJG2 B3 domain-containing protein At5g180003.0e-0623.84Show/hide
Query:  PKFFKMLLQSNIEYPKL-MIPKMFVKDYG-KLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIFDS
        P FFK+L + +     + MIP   ++    K  S  ++L++P G  W+V ++   N      +GW++F +   L     L F       N    V+IF++
Subjt:  PKFFKMLLQSNIEYPKL-MIPKMFVKDYG-KLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIFDS

Query:  TGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGCSI
         G E      +    T +  S  +  E  +S  +  KK ++               ES+S  + P       H  A   S    +  E N          
Subjt:  TGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGCSI

Query:  FSDIPNCKKRMPKEDDVEISRKR--QGLKNKAE---STDKPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQV--RNKEWNVTLKQYESYVRF
               KK   K +  + S+K+  + + N +E   S+  P FK+ + +S++     + IP  F   H   E    K+      K W+VT    +   RF
Subjt:  FSDIPNCKKRMPKEDDVEISRKR--QGLKNKAE---STDKPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQV--RNKEWNVTLKQYESYVRF

Query:  STGWSNVFHENDLRDGDTCLFEM
        S GWS +  E  L  GD C F++
Subjt:  STGWSNVFHENDLRDGDTCLFEM

Arabidopsis top hitse value%identityAlignment
AT1G49480.1 related to vernalization1 11.2e-0729.51Show/hide
Query:  AEGCSIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQVRNKEWNVTLKQYESYVRFS
        +E  S F +  + +KR    ++    R+R     K      P F+VV+  S +     M +P  FA+++ S    F KLQ+  K+W V         +FS
Subjt:  AEGCSIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQVRNKEWNVTLKQYESYVRFS

Query:  TGWSNVFHENDLRDGDTCLFEM
         GW     EN++ +GD C+FE+
Subjt:  TGWSNVFHENDLRDGDTCLFEM

AT3G18990.1 AP2/B3-like transcriptional factor family protein2.2e-2026.75Show/hide
Query:  PKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIFDSTG
        P F K++  S I+  +L +P  FV  +   LS +V L +PDG  W+VGL  A N  +W Q GW EF D Y +  G LL+F+     GNS+  V IF+ + 
Subjt:  PKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIFDSTG

Query:  VETQYSC-----NVNNCTTQS---DDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLI
         E  Y       + +N   ++   +D   +  E +     +     ++++P  +       +  F+   + EE       K        KK ++   +  
Subjt:  VETQYSC-----NVNNCTTQS---DDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLI

Query:  A-------EGCSIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQVRNKEWNVTLKQY
        +       E  S F +  + +KR    ++    R+R     K      P F+VV+  S +     M +P  FA+++ S    F K+Q+  K+W V     
Subjt:  A-------EGCSIFSDIPNCKKRMPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQVRNKEWNVTLKQY

Query:  ESYVRFSTGWSNVFHENDLRDGDTCLFEM
            +FS GW     EN+L +GD C+FE+
Subjt:  ESYVRFSTGWSNVFHENDLRDGDTCLFEM

AT4G33280.1 AP2/B3-like transcriptional factor family protein8.4e-1225.4Show/hide
Query:  KLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIFD-STGVETQYSCNVNNCTT
        +L+IP+ F     + L   V LK P G+ + VG+       +  + GWD+F   + LE   LLVFK     G S  EV +FD  T  E   S  V  C  
Subjt:  KLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIFD-STGVETQYSCNVNNCTT

Query:  QSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGCSIFSDIPNCKKRMPKED-
                          H++K K +     Q                  EE I S +     S      S  + V ++EG    S     ++ +  ++ 
Subjt:  QSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGCSIFSDIPNCKKRMPKED-

Query:  ----DVEI-----SRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQVRNKEWNVTLKQY--ESYVRFSTGWSNVFHEN
            DVE+     ++K   L  +A S D  GF V M +S+V  +  + IP  +  ++         +QV   +W +    +        STGW     +N
Subjt:  ----DVEI-----SRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQVRNKEWNVTLKQY--ESYVRFSTGWSNVFHEN

Query:  DLRDGDTCLFE
        +LR+GD C+FE
Subjt:  DLRDGDTCLFE

AT5G18000.1 VERDANDI2.1e-0723.84Show/hide
Query:  PKFFKMLLQSNIEYPKL-MIPKMFVKDYG-KLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIFDS
        P FFK+L + +     + MIP   ++    K  S  ++L++P G  W+V ++   N      +GW++F +   L     L F       N    V+IF++
Subjt:  PKFFKMLLQSNIEYPKL-MIPKMFVKDYG-KLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIFDS

Query:  TGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGCSI
         G E      +    T +  S  +  E  +S  +  KK ++               ES+S  + P       H  A   S    +  E N          
Subjt:  TGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGCSI

Query:  FSDIPNCKKRMPKEDDVEISRKR--QGLKNKAE---STDKPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQV--RNKEWNVTLKQYESYVRF
               KK   K +  + S+K+  + + N +E   S+  P FK+ + +S++     + IP  F   H   E    K+      K W+VT    +   RF
Subjt:  FSDIPNCKKRMPKEDDVEISRKR--QGLKNKAE---STDKPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQV--RNKEWNVTLKQYESYVRF

Query:  STGWSNVFHENDLRDGDTCLFEM
        S GWS +  E  L  GD C F++
Subjt:  STGWSNVFHENDLRDGDTCLFEM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCTACCTTCCTCCACCACTAACAATGGCTTCTCCTCCTAAGTTTTTCAAAATGCTTCTGCAGAGTAACATCGAATATCCAAAATTGATGATTCCGAAGATGTTTGTCAA
AGACTACGGTAAGCTTTTATCAAGTTCTGTAATTCTTAAGCTTCCAGATGGAATGGAATGGAAAGTGGGTTTGACGACGGCCGCTAACGGCGCCGTTTGGCTGCAAAAGG
GATGGGACGAATTTTCCGACCATTACTGTTTAGAGTTTGGTTCGTTGTTAGTTTTTAAATTATTGGATGGAAGAGGAAATTCTAGTTTAGAAGTATCAATATTTGATTCA
ACTGGAGTGGAAACCCAATATTCTTGCAATGTTAACAATTGTACAACACAATCTGATGATTCTAATTCTGATTCTGATGAAAGTTTGGAGAGTTTTCGCCGACATTCCAA
GAAGCGGAAGAAGGCTTCCCTTCCTTGTCGTCAATCTTGTAAGAGAATAACAAAGAAAGAATCGTTTTCAATCAAAACGGAACCTGAAGAAGAAGATATTTTCAGTCATG
TTAAGGCTATGGTACTCTCAAACAGTTTTAAAAAGTGTTCTGAAAAGAATTATGTTTTAATTGCAGAAGGATGCAGTATTTTTAGTGATATACCAAATTGTAAGAAAAGA
ATGCCAAAAGAAGATGATGTTGAGATTTCAAGGAAAAGGCAAGGATTAAAAAACAAAGCTGAATCAACTGATAAACCTGGCTTCAAAGTTGTGATGAGCCAATCAAACGT
AGGAGGTAGATTTAATATGAACATTCCCATGGCCTTTGCAAAGGAGCATTTTTCAGCAGAAATGTACTTTGCAAAACTTCAAGTTAGGAACAAAGAATGGAATGTAACAT
TGAAGCAATATGAGAGTTATGTCAGATTCTCAACTGGTTGGAGTAATGTTTTTCATGAGAATGACTTGAGAGATGGGGACACATGCTTGTTTGAGATG
mRNA sequenceShow/hide mRNA sequence
CTCTACCTTCCTCCACCACTAACAATGGCTTCTCCTCCTAAGTTTTTCAAAATGCTTCTGCAGAGTAACATCGAATATCCAAAATTGATGATTCCGAAGATGTTTGTCAA
AGACTACGGTAAGCTTTTATCAAGTTCTGTAATTCTTAAGCTTCCAGATGGAATGGAATGGAAAGTGGGTTTGACGACGGCCGCTAACGGCGCCGTTTGGCTGCAAAAGG
GATGGGACGAATTTTCCGACCATTACTGTTTAGAGTTTGGTTCGTTGTTAGTTTTTAAATTATTGGATGGAAGAGGAAATTCTAGTTTAGAAGTATCAATATTTGATTCA
ACTGGAGTGGAAACCCAATATTCTTGCAATGTTAACAATTGTACAACACAATCTGATGATTCTAATTCTGATTCTGATGAAAGTTTGGAGAGTTTTCGCCGACATTCCAA
GAAGCGGAAGAAGGCTTCCCTTCCTTGTCGTCAATCTTGTAAGAGAATAACAAAGAAAGAATCGTTTTCAATCAAAACGGAACCTGAAGAAGAAGATATTTTCAGTCATG
TTAAGGCTATGGTACTCTCAAACAGTTTTAAAAAGTGTTCTGAAAAGAATTATGTTTTAATTGCAGAAGGATGCAGTATTTTTAGTGATATACCAAATTGTAAGAAAAGA
ATGCCAAAAGAAGATGATGTTGAGATTTCAAGGAAAAGGCAAGGATTAAAAAACAAAGCTGAATCAACTGATAAACCTGGCTTCAAAGTTGTGATGAGCCAATCAAACGT
AGGAGGTAGATTTAATATGAACATTCCCATGGCCTTTGCAAAGGAGCATTTTTCAGCAGAAATGTACTTTGCAAAACTTCAAGTTAGGAACAAAGAATGGAATGTAACAT
TGAAGCAATATGAGAGTTATGTCAGATTCTCAACTGGTTGGAGTAATGTTTTTCATGAGAATGACTTGAGAGATGGGGACACATGCTTGTTTGAGATG
Protein sequenceShow/hide protein sequence
LYLPPPLTMASPPKFFKMLLQSNIEYPKLMIPKMFVKDYGKLLSSSVILKLPDGMEWKVGLTTAANGAVWLQKGWDEFSDHYCLEFGSLLVFKLLDGRGNSSLEVSIFDS
TGVETQYSCNVNNCTTQSDDSNSDSDESLESFRRHSKKRKKASLPCRQSCKRITKKESFSIKTEPEEEDIFSHVKAMVLSNSFKKCSEKNYVLIAEGCSIFSDIPNCKKR
MPKEDDVEISRKRQGLKNKAESTDKPGFKVVMSQSNVGGRFNMNIPMAFAKEHFSAEMYFAKLQVRNKEWNVTLKQYESYVRFSTGWSNVFHENDLRDGDTCLFEM