; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G010390 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G010390
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHTH-type transcriptional regulator protein ptxE
Genome locationchr01:8573944..8574408
RNA-Seq ExpressionLsi01G010390
SyntenyLsi01G010390
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141948.1 uncharacterized protein LOC101203564 [Cucumis sativus]7.6e-7495.45Show/hide
Query:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSES AVATAKLIL DGSLQEFSYPVKVSYVLQK+PSCFICNSDEMDFDDALSAI+DDEELQLGQLYFALPL+RLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE
        MKC GGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGR+KFAANLMAIPE
Subjt:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE

XP_008440178.1 PREDICTED: uncharacterized protein LOC103484721 [Cucumis melo]9.9e-7494.81Show/hide
Query:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSESAAVATAKLIL DGSLQEFSYPVKVSYVLQK+PSCFICNSDEMDFDDALSAI+DDEELQ+GQLYFALPL+RL+QPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE
        MKC GGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGR+KFAANLMAIPE
Subjt:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE

XP_022963140.1 uncharacterized protein LOC111463438 [Cucurbita moschata]1.3e-7091.56Show/hide
Query:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSES AVATAKLIL DGSLQEFSYPVKVSYVLQK+PSCFICNSDEMDFDDALSAI+D+EELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE
        MKCG GDKC HRRRSVSP+VFTVEELKTRKR++AGR GAGGR+KFAANL AIPE
Subjt:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE

XP_023518464.1 uncharacterized protein LOC111781952 [Cucurbita pepo subsp. pepo]2.1e-7193.51Show/hide
Query:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSES AVATAKLIL DGSLQEFSYPVKVSYVLQK+PSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE
        MKCG GDKC HRRRSVSPVVFTVEELKTRKR++AGR GAGGR KFAANL AIPE
Subjt:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE

XP_038883003.1 uncharacterized protein LOC120074082 [Benincasa hispida]2.0e-7496.75Show/hide
Query:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSESAAVATAKLIL DGSLQEFSYPVKVSYVLQ +PSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPL+RLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE
        MKCGGGDKC HRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE
Subjt:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE

TrEMBL top hitse value%identityAlignment
A0A0A0KJB4 Uncharacterized protein3.7e-7495.45Show/hide
Query:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSES AVATAKLIL DGSLQEFSYPVKVSYVLQK+PSCFICNSDEMDFDDALSAI+DDEELQLGQLYFALPL+RLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE
        MKC GGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGR+KFAANLMAIPE
Subjt:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE

A0A1S3B0H3 uncharacterized protein LOC1034847214.8e-7494.81Show/hide
Query:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSESAAVATAKLIL DGSLQEFSYPVKVSYVLQK+PSCFICNSDEMDFDDALSAI+DDEELQ+GQLYFALPL+RL+QPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE
        MKC GGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGR+KFAANLMAIPE
Subjt:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE

A0A5D3CRH4 HTH-type transcriptional regulator protein ptxE4.8e-7494.81Show/hide
Query:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSESAAVATAKLIL DGSLQEFSYPVKVSYVLQK+PSCFICNSDEMDFDDALSAI+DDEELQ+GQLYFALPL+RL+QPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE
        MKC GGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGR+KFAANLMAIPE
Subjt:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE

A0A6J1HH54 uncharacterized protein LOC1114634386.5e-7191.56Show/hide
Query:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSES AVATAKLIL DGSLQEFSYPVKVSYVLQK+PSCFICNSDEMDFDDALSAI+D+EELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE
        MKCG GDKC HRRRSVSP+VFTVEELKTRKR++AGR GAGGR+KFAANL AIPE
Subjt:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE

A0A6J1KPP1 uncharacterized protein LOC1114971503.2e-7090.26Show/hide
Query:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSES AVATAKLIL DG+LQEFSYPVKVSY+LQK+PSCFICNSDEMDFDDALSAISD+EELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
Subjt:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE
        MKCG GDKC HRRRSVSPVVF +EELKTRKR++AGR GAGGR KFAANL AIPE
Subjt:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76600.1 unknown protein1.1e-1739.76Show/hide
Query:  MGICSSSES----AAVATAKLILQDGSLQEFSYPVKVSYVLQKH----------PSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQA
        MG+C S       ++  TAK++  +G L+E+  PV  S VL+             S F+CNSD + +DD + AI  DE LQ  Q+YF LP+S+ +  L A
Subjt:  MGICSSSES----AAVATAKLILQDGSLQEFSYPVKVSYVLQKH----------PSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQA

Query:  EEMAALAVKANSALMKCGGGDKCGHRRRS--VSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLM
         +MAALAVKA+ A+ K  G  K   RRRS  +SPVV T+ +     R+AA     GG    A N+M
Subjt:  EEMAALAVKANSALMKCGGGDKCGHRRRS--VSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLM

AT2G23690.1 unknown protein9.3e-4662.8Show/hide
Query:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSS ES  VATAKLIL DG + EF+ PVKV YVLQK+P CFICNSD+MDFD+ +SAIS DEE QLGQLYFALPLS L   L+AEEMAALAVKA+SAL
Subjt:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGGG---DKCGHRRRSVSPVVFTVEEL-------KTRKRVAAGRGGAGGRRKFAANLMAIPE
        M+ GG    DKC  RR+ VSPV+F+   +       +TR     G GG  GRRK+AA L  I E
Subjt:  MKCGGG---DKCGHRRRSVSPVVFTVEEL-------KTRKRVAAGRGGAGGRRKFAANLMAIPE

AT3G50800.1 unknown protein2.8e-3454.19Show/hide
Query:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MG C+S ES    TAKLIL DG+LQEFS PVKV  +LQK+P+ F+CNSD+MDFDDA+ A+   E+L+ G+LYF LPL+ L  PL+A+EMAALAVKA+SAL
Subjt:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAG-GRRKFAANLMAIPE
         K GGG   G            V  +K       G GG G GRRKF A L +I E
Subjt:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGRGGAG-GRRKFAANLMAIPE

AT4G37240.1 unknown protein1.9e-4367.35Show/hide
Query:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MGICSSSES  VATAKLILQDG + EF+ PVKV YVL K+P CFICNSD+MDFDDA++AIS DEELQLGQ+YFALPL  L+QPL+AEEMAALAVKA+SAL
Subjt:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGR---GGAGGRRK
        M+ GGG   G RR+ V P+V      K R RV +G    G   GRRK
Subjt:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVAAGR---GGAGGRRK

AT5G66580.1 unknown protein8.7e-3654.66Show/hide
Query:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL
        MG C+S ES    +AKLIL DG+LQEFS PVKV  +LQK+P+ F+CNSDEMDFDDA+SA++ +EEL+ GQLYF LPL+ L  PL+AEEMAALAVKA+SAL
Subjt:  MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSAL

Query:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVA-------AGRGGAGGRRKFAANLMAIPE
         K GG         S    V T E+   +K +A        GRG   G+R+F ANL  I E
Subjt:  MKCGGGDKCGHRRRSVSPVVFTVEELKTRKRVA-------AGRGGAGGRRKFAANLMAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATTTGCAGTTCTTCGGAATCTGCCGCCGTTGCCACCGCCAAATTGATTCTTCAGGACGGAAGCCTGCAGGAATTTTCGTATCCGGTTAAGGTTTCGTACGTTCT
TCAAAAGCATCCGTCTTGCTTTATATGCAACTCCGACGAGATGGATTTCGATGACGCCTTGTCGGCCATTAGCGATGACGAGGAGCTTCAACTTGGACAGCTTTATTTTG
CGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGGCAGAGGAAATGGCCGCATTGGCTGTCAAGGCCAACTCTGCGCTAATGAAATGTGGTGGCGGAGATAAATGTGGC
CACCGCCGGAGATCGGTGTCTCCGGTTGTTTTCACGGTTGAGGAACTCAAGACTCGTAAACGAGTGGCCGCCGGCCGTGGTGGCGCCGGTGGAAGACGAAAGTTCGCGGC
GAATTTGATGGCGATTCCTGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTATTTGCAGTTCTTCGGAATCTGCCGCCGTTGCCACCGCCAAATTGATTCTTCAGGACGGAAGCCTGCAGGAATTTTCGTATCCGGTTAAGGTTTCGTACGTTCT
TCAAAAGCATCCGTCTTGCTTTATATGCAACTCCGACGAGATGGATTTCGATGACGCCTTGTCGGCCATTAGCGATGACGAGGAGCTTCAACTTGGACAGCTTTATTTTG
CGCTGCCGTTGAGTAGGCTGAAGCAGCCGCTTCAGGCAGAGGAAATGGCCGCATTGGCTGTCAAGGCCAACTCTGCGCTAATGAAATGTGGTGGCGGAGATAAATGTGGC
CACCGCCGGAGATCGGTGTCTCCGGTTGTTTTCACGGTTGAGGAACTCAAGACTCGTAAACGAGTGGCCGCCGGCCGTGGTGGCGCCGGTGGAAGACGAAAGTTCGCGGC
GAATTTGATGGCGATTCCTGAGTAG
Protein sequenceShow/hide protein sequence
MGICSSSESAAVATAKLILQDGSLQEFSYPVKVSYVLQKHPSCFICNSDEMDFDDALSAISDDEELQLGQLYFALPLSRLKQPLQAEEMAALAVKANSALMKCGGGDKCG
HRRRSVSPVVFTVEELKTRKRVAAGRGGAGGRRKFAANLMAIPE