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Lsi01G010600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G010600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages;
Genome locationchr01:8797753..8805374
RNA-Seq ExpressionLsi01G010600
SyntenyLsi01G010600
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141960.1 uncharacterized protein LOC101206523 [Cucumis sativus]2.8e-4586.79Show/hide
Query:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCF
        +EKTAPWLSVPQFGDWDQKGQ+PDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA AAPPTTTD FPTDNHHPYHQ+HH PP        TRKSILSCF
Subjt:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCF

Query:  NCCVKA
        NCCVKA
Subjt:  NCCVKA

XP_008440144.1 PREDICTED: uncharacterized protein LOC103484698 isoform X2 [Cucumis melo]3.6e-4587.85Show/hide
Query:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPY-HQSHHPPPGTVIIFWKTRKSILSC
        +EKTAPWLSVPQFGDWDQKGQ+PDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA AAPPTTTD FPTDNHHPY HQSHHPPP        TRKSILSC
Subjt:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPY-HQSHHPPPGTVIIFWKTRKSILSC

Query:  FNCCVKA
        FNCCVKA
Subjt:  FNCCVKA

XP_022977957.1 uncharacterized protein LOC111478092 [Cucurbita maxima]1.6e-4586.79Show/hide
Query:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCF
        +EKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIASAAPPTTTD FPTDNHHPYHQSHH PP        TRKSILSCF
Subjt:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCF

Query:  NCCVKA
        NCC+KA
Subjt:  NCCVKA

XP_023545041.1 uncharacterized protein LOC111804467 [Cucurbita pepo subsp. pepo]2.8e-4586.79Show/hide
Query:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCF
        +EKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIASAAPPTTT+ FPTDNHHPYHQSHH PP        TRKSILSCF
Subjt:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCF

Query:  NCCVKA
        NCCVKA
Subjt:  NCCVKA

XP_038881128.1 uncharacterized protein LOC120072730 [Benincasa hispida]1.3e-4586.79Show/hide
Query:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCF
        +EKTAPWLSVPQFGDWDQKGQ+PDYSLDFSKLRENRKQNKR+VSRASLGNEEELI SAAPPTTT+ FPTDNHHPYHQSHHPPP        TRKSILSCF
Subjt:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCF

Query:  NCCVKA
        NCCVKA
Subjt:  NCCVKA

TrEMBL top hitse value%identityAlignment
A0A0A0KJ83 Uncharacterized protein1.4e-4586.79Show/hide
Query:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCF
        +EKTAPWLSVPQFGDWDQKGQ+PDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA AAPPTTTD FPTDNHHPYHQ+HH PP        TRKSILSCF
Subjt:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCF

Query:  NCCVKA
        NCCVKA
Subjt:  NCCVKA

A0A1S3B006 uncharacterized protein LOC103484698 isoform X12.3e-4588.68Show/hide
Query:  EKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPY-HQSHHPPPGTVIIFWKTRKSILSCF
        EKTAPWLSVPQFGDWDQKGQ+PDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA AAPPTTTD FPTDNHHPY HQSHHPPP        TRKSILSCF
Subjt:  EKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPY-HQSHHPPPGTVIIFWKTRKSILSCF

Query:  NCCVKA
        NCCVKA
Subjt:  NCCVKA

A0A1S3B0G0 uncharacterized protein LOC103484698 isoform X21.8e-4587.85Show/hide
Query:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPY-HQSHHPPPGTVIIFWKTRKSILSC
        +EKTAPWLSVPQFGDWDQKGQ+PDYSLDFSKLRENRKQNKRDVSRASLGNEEELIA AAPPTTTD FPTDNHHPY HQSHHPPP        TRKSILSC
Subjt:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPY-HQSHHPPPGTVIIFWKTRKSILSC

Query:  FNCCVKA
        FNCCVKA
Subjt:  FNCCVKA

A0A6J1GFA9 uncharacterized protein LOC1114534223.0e-4585.85Show/hide
Query:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCF
        +EKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRD+SRASLGNEEELIASAAPPTTT+ FPTDNHHPYHQSHH PP        TRKSILSCF
Subjt:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCF

Query:  NCCVKA
        NCCVKA
Subjt:  NCCVKA

A0A6J1IJV1 uncharacterized protein LOC1114780927.9e-4686.79Show/hide
Query:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCF
        +EKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIASAAPPTTTD FPTDNHHPYHQSHH PP        TRKSILSCF
Subjt:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCF

Query:  NCCVKA
        NCC+KA
Subjt:  NCCVKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09960.1 FUNCTIONS IN: molecular_function unknown2.5e-2858.56Show/hide
Query:  EEKTAPWLSVPQFGDWDQK--GQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPT---DNHHPYHQSHHPPPGTVIIFWKTRKS
        +EK  PWLSVPQFGDWDQK  G +PDYS+DF+K+RE RKQNKRD SRASLGNEEELI      T+T    T   +N   +  SHH  P +      TR+S
Subjt:  EEKTAPWLSVPQFGDWDQK--GQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPT---DNHHPYHQSHHPPPGTVIIFWKTRKS

Query:  ILSCFNCCVKA
        + SCFNCCVKA
Subjt:  ILSCFNCCVKA

AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein1.8e-1340Show/hide
Query:  KTAPWLSVPQFGDWDQKG--QVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCF
        + A W  VPQFG WDQKG     +YS+ FSK R NRKQNK  V  +SLG+E+EL+ S             NH   H  H       ++    +K IL+  
Subjt:  KTAPWLSVPQFGDWDQKG--QVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCF

Query:  NCCVK
        NCC++
Subjt:  NCCVK

AT5G64850.1 FUNCTIONS IN: molecular_function unknown6.9e-2655.26Show/hide
Query:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELI--------ASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKT
        E K +PWLSVPQFGDWDQKG   DYS+DFSK+RE RK NKRD SRASLGNEEELI           A P       +DN++    SHH P          
Subjt:  EEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRASLGNEEELI--------ASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKT

Query:  RKSILSCFNCCVKA
        R+ I SCFNCCVKA
Subjt:  RKSILSCFNCCVKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAATATTGAGAGGCTGTGTATGTTGTACTCCAACGAAGAAGAATATAAGAATTGCAGTGTCCTTTCCCGGTGTTACTTCGTTGCTTCTGCTCTACGCTTTCACTC
TCAATCCTCTTCGCAGGGTAAGGAGCTTGAACTCTTCTCCTCTTGCTGCTTCAAGCGTCTTCTTGTCCGCGCGACTCTTGAAGAGAAAACTGCTCCCTGGCTTTCAGTGC
CACAGTTTGGAGATTGGGACCAGAAGGGACAGGTGCCTGACTACTCGCTTGATTTCTCAAAACTTAGGGAAAATAGGAAACAAAACAAGAGAGACGTGTCCCGGGCGAGT
CTTGGAAATGAAGAGGAGCTCATTGCCTCAGCTGCACCCCCAACAACAACAGACCCTTTCCCTACTGATAATCATCACCCCTATCATCAGAGTCACCACCCTCCACCAGG
GACGGTGATCATATTTTGGAAGACAAGAAAGAGCATTCTAAGCTGCTTCAACTGCTGCGTGAAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAATATTGAGAGGCTGTGTATGTTGTACTCCAACGAAGAAGAATATAAGAATTGCAGTGTCCTTTCCCGGTGTTACTTCGTTGCTTCTGCTCTACGCTTTCACTC
TCAATCCTCTTCGCAGGGTAAGGAGCTTGAACTCTTCTCCTCTTGCTGCTTCAAGCGTCTTCTTGTCCGCGCGACTCTTGAAGAGAAAACTGCTCCCTGGCTTTCAGTGC
CACAGTTTGGAGATTGGGACCAGAAGGGACAGGTGCCTGACTACTCGCTTGATTTCTCAAAACTTAGGGAAAATAGGAAACAAAACAAGAGAGACGTGTCCCGGGCGAGT
CTTGGAAATGAAGAGGAGCTCATTGCCTCAGCTGCACCCCCAACAACAACAGACCCTTTCCCTACTGATAATCATCACCCCTATCATCAGAGTCACCACCCTCCACCAGG
GACGGTGATCATATTTTGGAAGACAAGAAAGAGCATTCTAAGCTGCTTCAACTGCTGCGTGAAAGCTTGAATTAAGTAGTCTTGAAGACGACCTCTGCAGGCCCACTTTT
GAGAATCGAGAATCAAGAATGAGTAGTGAGAGTAAGAGCGAAAGCAAGTGTCGAGTTATCAAGAGACAAACGAAAGTGAATTAGCGAGAAGTGAGCTTTAAGGGTCACCA
CAAGTGCTTCGAAGGATTGTTACATTAAAGTAAAGGTGAAAAAGCTTGGAGACTTTTTGGTTGGCAATTTGGATTTTATGTTTTAGATTCATTGTGTCTAGCAAATATCT
GTTCAACCTGGATTCTATTTCTGAAAATTGTTTTCGAATGTGATCCGAACCATGGAAATTTTGAGAACAATATTTTTATGTTTTCAATATATTCAGATTTTGAATTTT
Protein sequenceShow/hide protein sequence
MDNIERLCMLYSNEEEYKNCSVLSRCYFVASALRFHSQSSSQGKELELFSSCCFKRLLVRATLEEKTAPWLSVPQFGDWDQKGQVPDYSLDFSKLRENRKQNKRDVSRAS
LGNEEELIASAAPPTTTDPFPTDNHHPYHQSHHPPPGTVIIFWKTRKSILSCFNCCVKA