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Lsi01G010660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G010660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionABC transporter F family member 5
Genome locationchr01:8841561..8845678
RNA-Seq ExpressionLsi01G010660
SyntenyLsi01G010660
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI21514.3 unnamed protein product, partial [Vitis vinifera]4.7e-1582.14Show/hide
Query:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
        P K+ LE   EAITEY+GTV+TVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN  L
Subjt:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
RVX21107.1 ABC transporter F family member 5 [Vitis vinifera]4.7e-1582.14Show/hide
Query:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
        P K+ LE   EAITEY+GTV+TVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN  L
Subjt:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
XP_002279804.1 PREDICTED: ABC transporter F family member 5 [Vitis vinifera]4.7e-1582.14Show/hide
Query:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
        P K+ LE   EAITEY+GTV+TVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN  L
Subjt:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
XP_023544115.1 ABC transporter F family member 5 isoform X1 [Cucurbita pepo subsp. pepo]8.0e-1583.93Show/hide
Query:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
        P K+ LE   EAI EYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN  L
Subjt:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
XP_034690331.1 ABC transporter F family member 5 [Vitis riparia]4.7e-1582.14Show/hide
Query:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
        P K+ LE   EAITEY+GTV+TVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN  L
Subjt:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
TrEMBL top hitse value%identityAlignment
A0A438F551 ABC transporter F family member 52.3e-1582.14Show/hide
Query:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
        P K+ LE   EAITEY+GTV+TVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN  L
Subjt:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
A0A438KIT4 ABC transporter F family member 52.3e-1582.14Show/hide
Query:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
        P K+ LE   EAITEY+GTV+TVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN  L
Subjt:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
A0A6J1IRL1 ABC transporter F family member 5 isoform X13.9e-1583.93Show/hide
Query:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
        P K+ LE   EAI EYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN  L
Subjt:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
A0A6J1ISR3 ABC transporter F family member 5 isoform X23.9e-1583.93Show/hide
Query:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
        P K+ LE   EAI EYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN  L
Subjt:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
F6H4A9 Uncharacterized protein2.3e-1582.14Show/hide
Query:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
        P K+ LE   EAITEY+GTV+TVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN  L
Subjt:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
SwissProt top hitse value%identityAlignment
O05519 Putative ATP-binding protein YdiF4.1e-0647.62Show/hide
Query:  AITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN
        A+ +Y GT++ VSHDRYFI +I  RV+E+   ++++Y GDY+
Subjt:  AITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN
O06476 Uncharacterized ABC transporter ATP-binding protein YfmR3.5e-0543.18Show/hide
Query:  ITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
        +++Y G V+ V+HDRYF+ ++ NR+ E++ G+L  Y G+Y V L
Subjt:  ITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
P44808 Probable ATP-binding protein YheS5.0e-0436.59Show/hide
Query:  ITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN
        + +Y+GT++ +SHDR F+  IV +++ +++  L +Y GDY+
Subjt:  ITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN
Q9FIB4 ABC transporter F family member 21.3e-1579.25Show/hide
Query:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN
        P K+ LE   EAI EY+GTVITVSHDRYFIKQIVNRVIEV+DG L DYAGDYN
Subjt:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN
Q9LV93 ABC transporter F family member 58.3e-1575Show/hide
Query:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
        P K+ LE   EAI EY+GTVI VSHDRYFIKQIVNRVIEV+DG L+DYAGDYN  L
Subjt:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
Arabidopsis top hitse value%identityAlignment
AT5G09930.1 ABC transporter family protein9.1e-1779.25Show/hide
Query:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN
        P K+ LE   EAI EY+GTVITVSHDRYFIKQIVNRVIEV+DG L DYAGDYN
Subjt:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYN
AT5G64840.1 general control non-repressible 55.9e-1675Show/hide
Query:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL
        P K+ LE   EAI EY+GTVI VSHDRYFIKQIVNRVIEV+DG L+DYAGDYN  L
Subjt:  PLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAGGTCAGCTGTGACAAGGAAGTCTGTACTTGAAAACCAAACACCTTTGAAGAAGAAATTGGAACCAGATTCTGAGGCAATAACTGAATACCGTGGCACTGTCAT
CACTGTTTCTCATGATCGATACTTTATAAAGCAAATTGTAAATAGAGTCATTGAAGTTAAAGACGGAAATTTACAGGATTACGCGGGTGATTACAATGTAAGGCTGCTTC
GACTCTTCACTTATTTATCATCTAATGCTCCCGTTATGAATAATGGCAGCTGCAACAATTTTCAACTCAATGAAAGTCACTTGTCTTCCCAAACAAGTTCTTGGTCCAGC
ATTGAAGGTCAAGAATTTGTAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAGGTCAGCTGTGACAAGGAAGTCTGTACTTGAAAACCAAACACCTTTGAAGAAGAAATTGGAACCAGATTCTGAGGCAATAACTGAATACCGTGGCACTGTCAT
CACTGTTTCTCATGATCGATACTTTATAAAGCAAATTGTAAATAGAGTCATTGAAGTTAAAGACGGAAATTTACAGGATTACGCGGGTGATTACAATGTAAGGCTGCTTC
GACTCTTCACTTATTTATCATCTAATGCTCCCGTTATGAATAATGGCAGCTGCAACAATTTTCAACTCAATGAAAGTCACTTGTCTTCCCAAACAAGTTCTTGGTCCAGC
ATTGAAGGTCAAGAATTTGTAAGATGA
Protein sequenceShow/hide protein sequence
MDRSAVTRKSVLENQTPLKKKLEPDSEAITEYRGTVITVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNVRLLRLFTYLSSNAPVMNNGSCNNFQLNESHLSSQTSSWSS
IEGQEFVR