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Lsi01G010770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G010770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHeat shock protein 40
Genome locationchr01:8948481..8952505
RNA-Seq ExpressionLsi01G010770
SyntenyLsi01G010770
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647478.1 hypothetical protein Csa_003673 [Cucumis sativus]4.0e-1858.14Show/hide
Query:  MEKKNSDEKRSSMIVIRYGETRRKATAYWSPAMDNIVQVSYKKTLIEAMDQIDSKIDRVLYSSN-KTRRLPIFDEICPFYSSLWRW
        MEKKN+D+K++  IV+R GET++K+T+ WSPAMDNIV++S K +L EA+D++D+KID +LYSS+ +T+RLPIF+EICP +SS +++
Subjt:  MEKKNSDEKRSSMIVIRYGETRRKATAYWSPAMDNIVQVSYKKTLIEAMDQIDSKIDRVLYSSN-KTRRLPIFDEICPFYSSLWRW
KAG6604244.1 hypothetical protein SDJN03_04853, partial [Cucurbita argyrosperma subsp. sororia]5.3e-1059.42Show/hide
Query:  IVIRYGETRRKATAYWSPAMDNIVQV-SYKKTLIEAMDQIDSKIDRVLYSSNKTRRLPIFDEICPFYSS
        IV+  GET  K T  WSP MD+IVQ+ S  K+L + +D+IDSKIDRVLYSS   RRLPIF+E+CP  S+
Subjt:  IVIRYGETRRKATAYWSPAMDNIVQV-SYKKTLIEAMDQIDSKIDRVLYSSNKTRRLPIFDEICPFYSS
TYK12969.1 heat shock protein 40 [Cucumis melo var. makuwa]3.3e-2065.43Show/hide
Query:  MEKKNSDEKRSSMIVIRYGETRRKATAYWSPAMDNIVQVSYKKTLIEAMDQIDSKIDRVLYSSNKTRRLPIFDEICPFYSS
        MEKKN+D+K++  IV+R GETR+K+TA WSPAMDNIV++S K TL +A+D++DSKID +LYS  KT+RLPIF+EICP +SS
Subjt:  MEKKNSDEKRSSMIVIRYGETRRKATAYWSPAMDNIVQVSYKKTLIEAMDQIDSKIDRVLYSSNKTRRLPIFDEICPFYSS
TrEMBL top hitse value%identityAlignment
A0A0A0KKZ2 Uncharacterized protein2.5e-1860.98Show/hide
Query:  MEKKNSDEKRSSMIVIRYGETRRKATAYWSPAMDNIVQVSYKKTLIEAMDQIDSKIDRVLYSSN-KTRRLPIFDEICPFYSS
        MEKKN+D+K++  IV+R GET++K+T+ WSPAMDNIV++S K +L EA+D++D+KID +LYSS+ +T+RLPIF+EICP +SS
Subjt:  MEKKNSDEKRSSMIVIRYGETRRKATAYWSPAMDNIVQVSYKKTLIEAMDQIDSKIDRVLYSSN-KTRRLPIFDEICPFYSS
A0A5D3CRK5 Heat shock protein 401.6e-2065.43Show/hide
Query:  MEKKNSDEKRSSMIVIRYGETRRKATAYWSPAMDNIVQVSYKKTLIEAMDQIDSKIDRVLYSSNKTRRLPIFDEICPFYSS
        MEKKN+D+K++  IV+R GETR+K+TA WSPAMDNIV++S K TL +A+D++DSKID +LYS  KT+RLPIF+EICP +SS
Subjt:  MEKKNSDEKRSSMIVIRYGETRRKATAYWSPAMDNIVQVSYKKTLIEAMDQIDSKIDRVLYSSNKTRRLPIFDEICPFYSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAACTTAAACCGAAAAACCGCCATCAATTGACCGGCGCCGGCATGGAGAAGAAAAACAGCGACGAGAAAAGAAGTTCGATGATTGTGATTAGGTATGGGGA
AACAAGAAGAAAGGCAACGGCATATTGGTCGCCGGCGATGGATAATATAGTGCAAGTTTCTTACAAGAAGACATTGATTGAAGCAATGGATCAAATCGATTCCAAAATCG
ATCGTGTTCTTTATTCTTCCAACAAGACCAGGAGATTACCAATTTTTGATGAGATTTGTCCATTTTATTCCTCTTTATGGAGATGGGTGGAAGAGATTAAAGTTTTTAGA
TCGAACAGCTGGTTAAGGCATACATACCCTAACAATGGATTAGGGAATCTGAACAATAAGAACAATGGATTTTTTACCTCGCTCACATTTGGACGTAATCGAGCTGAAGA
ATCGATGCAAAGGTTAAGGCACAGAAAATACGTTGAAGAAAGAACTAAGTTCTTACCCACAGAACTAAGCTTCTTTGTCCTTCAGCAACACCGAAATCAATGGGACGTCT
GCCTGACAAAAGTCACTTTCCACACTAAAGTTATGCCATCATTGCAATGTCCTGGAAATTTATTTGTCGAGATGATGCGTAAACTTTGGTACGATATGTTAGAAGTATCA
CCTGGGGTTGGAATTTCTCAGAAAGAAGAATGTTGGAAGATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAAACTTAAACCGAAAAACCGCCATCAATTGACCGGCGCCGGCATGGAGAAGAAAAACAGCGACGAGAAAAGAAGTTCGATGATTGTGATTAGGTATGGGGA
AACAAGAAGAAAGGCAACGGCATATTGGTCGCCGGCGATGGATAATATAGTGCAAGTTTCTTACAAGAAGACATTGATTGAAGCAATGGATCAAATCGATTCCAAAATCG
ATCGTGTTCTTTATTCTTCCAACAAGACCAGGAGATTACCAATTTTTGATGAGATTTGTCCATTTTATTCCTCTTTATGGAGATGGGTGGAAGAGATTAAAGTTTTTAGA
TCGAACAGCTGGTTAAGGCATACATACCCTAACAATGGATTAGGGAATCTGAACAATAAGAACAATGGATTTTTTACCTCGCTCACATTTGGACGTAATCGAGCTGAAGA
ATCGATGCAAAGGTTAAGGCACAGAAAATACGTTGAAGAAAGAACTAAGTTCTTACCCACAGAACTAAGCTTCTTTGTCCTTCAGCAACACCGAAATCAATGGGACGTCT
GCCTGACAAAAGTCACTTTCCACACTAAAGTTATGCCATCATTGCAATGTCCTGGAAATTTATTTGTCGAGATGATGCGTAAACTTTGGTACGATATGTTAGAAGTATCA
CCTGGGGTTGGAATTTCTCAGAAAGAAGAATGTTGGAAGATTTAA
Protein sequenceShow/hide protein sequence
MASKLKPKNRHQLTGAGMEKKNSDEKRSSMIVIRYGETRRKATAYWSPAMDNIVQVSYKKTLIEAMDQIDSKIDRVLYSSNKTRRLPIFDEICPFYSSLWRWVEEIKVFR
SNSWLRHTYPNNGLGNLNNKNNGFFTSLTFGRNRAEESMQRLRHRKYVEERTKFLPTELSFFVLQQHRNQWDVCLTKVTFHTKVMPSLQCPGNLFVEMMRKLWYDMLEVS
PGVGISQKEECWKI