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Lsi01G010800 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G010800
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDNA-binding WRKY
Genome locationchr01:8963004..8963528
RNA-Seq ExpressionLsi01G010800
SyntenyLsi01G010800
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR003657 - WRKY domain
IPR036576 - WRKY domain superfamily
IPR044810 - WRKY transcription factor, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604245.1 putative WRKY transcription factor 51, partial [Cucurbita argyrosperma subsp. sororia]3.2e-3267.5Show/hide
Query:  MNSPQNPSFFFDHHQLQDSSSSFMDFLNFSSYPLPDLSLEAETVALSLSEGGTGDGSRSMEAT--DGWCEAEGVKRKKEKGGGCNNRVAFITKSELEILD
        MN  QNPSFF D+HQ QDSS SFMDF   SSYPLPD  LEAET   SL+E  TG    S EAT  D  C+ +  KRKKE+G GCNNRVAF TKS  +ILD
Subjt:  MNSPQNPSFFFDHHQLQDSSSSFMDFLNFSSYPLPDLSLEAETVALSLSEGGTGDGSRSMEAT--DGWCEAEGVKRKKEKGGGCNNRVAFITKSELEILD

Query:  DGFKWRKYGKKSVKNSPHPR
        DGFKWRKYGKKSVKN+ HPR
Subjt:  DGFKWRKYGKKSVKNSPHPR

XP_004141964.1 probable WRKY transcription factor 51 [Cucumis sativus]5.5e-4072.87Show/hide
Query:  MNSPQNPSFFFDHHQLQD---SSSSFMDFLNFSSYPLPDLSLEAETVALSLSEGGTGDGSRSMEAT--------DGWCEAEGVKRKKEKGGGCNNRVAFI
        MNS QNP+FFFDHHQ  D   SSSS MDFLNFS YPLPD  LEAET   SLSE  TGDGS SM+AT        DGW E +GVKRKK +  G  NRVAFI
Subjt:  MNSPQNPSFFFDHHQLQD---SSSSFMDFLNFSSYPLPDLSLEAETVALSLSEGGTGDGSRSMEAT--------DGWCEAEGVKRKKEKGGGCNNRVAFI

Query:  TKSELEILDDGFKWRKYGKKSVKNSPHPR
        TKSELEILDDGFKWRKYGKKSVKNSPHPR
Subjt:  TKSELEILDDGFKWRKYGKKSVKNSPHPR

XP_008440131.1 PREDICTED: probable WRKY transcription factor 51 [Cucumis melo]8.7e-4677.34Show/hide
Query:  MNSPQNPSFFFDHHQL--QDSSSSFMDFLNFSSYPLPDLSLEAETVALSLSEGGTGDGSRSMEAT--------DGWCEAEGVKRKKEKGGGCNNRVAFIT
        MNS QNP+FFFDHHQ   QDSSSSFMDFLNFS YPLPD  LEAET   SLSE GTGDGSRSM+AT        DGW E +GVKRKKE+G GCN++VAFIT
Subjt:  MNSPQNPSFFFDHHQL--QDSSSSFMDFLNFSSYPLPDLSLEAETVALSLSEGGTGDGSRSMEAT--------DGWCEAEGVKRKKEKGGGCNNRVAFIT

Query:  KSELEILDDGFKWRKYGKKSVKNSPHPR
        KSELEILDDG+KWRKYGKKSVKNSPHPR
Subjt:  KSELEILDDGFKWRKYGKKSVKNSPHPR

XP_022133095.1 probable WRKY transcription factor 51 [Momordica charantia]9.4e-3264.29Show/hide
Query:  MNSPQNPSFFFDHHQLQDSSSSFMDFLNFSSYPLPDLSL-EAETVALSLSEGGTGDGSRSMEAT-------DGWCEAEGVKRKKEKGGGCNNRVAFITKS
        MNSPQNPS   +HH  QDSSSSFMDF +FS YP PD  + EAET+ L  +  G      + EAT       + WCE +GVKRKKE GGGC+NRVAF TKS
Subjt:  MNSPQNPSFFFDHHQLQDSSSSFMDFLNFSSYPLPDLSL-EAETVALSLSEGGTGDGSRSMEAT-------DGWCEAEGVKRKKEKGGGCNNRVAFITKS

Query:  ELEILDDGFKWRKYGKKSVKNSPHPR
        ELEILDDGFKWRKYGKKSVK+SP+PR
Subjt:  ELEILDDGFKWRKYGKKSVKNSPHPR

XP_038883139.1 probable WRKY transcription factor 75 [Benincasa hispida]3.3e-3772.03Show/hide
Query:  MNSPQNPSFFFDHHQLQDSSSSFMDFLNFSSYPLPDLSLEAETVALSLSEGGTGDGSRSMEATDGWCEAEGVKRKKEKGGGCNNRVAFITKSELEILDDG
        MNSPQN SFFFD+HQ QDSSSS MDFLNFS YP PD  LEA               S      DGWCEA+GV+RKKE+GGGCNNRVAFITKSELEILDDG
Subjt:  MNSPQNPSFFFDHHQLQDSSSSFMDFLNFSSYPLPDLSLEAETVALSLSEGGTGDGSRSMEATDGWCEAEGVKRKKEKGGGCNNRVAFITKSELEILDDG

Query:  FKWRKYGKKSVKNSPHPR
        FKWRKYGKKSVKNSPH R
Subjt:  FKWRKYGKKSVKNSPHPR

TrEMBL top hitse value%identityAlignment
A0A0A0KFX2 WRKY domain-containing protein2.7e-4072.87Show/hide
Query:  MNSPQNPSFFFDHHQLQD---SSSSFMDFLNFSSYPLPDLSLEAETVALSLSEGGTGDGSRSMEAT--------DGWCEAEGVKRKKEKGGGCNNRVAFI
        MNS QNP+FFFDHHQ  D   SSSS MDFLNFS YPLPD  LEAET   SLSE  TGDGS SM+AT        DGW E +GVKRKK +  G  NRVAFI
Subjt:  MNSPQNPSFFFDHHQLQD---SSSSFMDFLNFSSYPLPDLSLEAETVALSLSEGGTGDGSRSMEAT--------DGWCEAEGVKRKKEKGGGCNNRVAFI

Query:  TKSELEILDDGFKWRKYGKKSVKNSPHPR
        TKSELEILDDGFKWRKYGKKSVKNSPHPR
Subjt:  TKSELEILDDGFKWRKYGKKSVKNSPHPR

A0A1S3AZZ8 probable WRKY transcription factor 514.2e-4677.34Show/hide
Query:  MNSPQNPSFFFDHHQL--QDSSSSFMDFLNFSSYPLPDLSLEAETVALSLSEGGTGDGSRSMEAT--------DGWCEAEGVKRKKEKGGGCNNRVAFIT
        MNS QNP+FFFDHHQ   QDSSSSFMDFLNFS YPLPD  LEAET   SLSE GTGDGSRSM+AT        DGW E +GVKRKKE+G GCN++VAFIT
Subjt:  MNSPQNPSFFFDHHQL--QDSSSSFMDFLNFSSYPLPDLSLEAETVALSLSEGGTGDGSRSMEAT--------DGWCEAEGVKRKKEKGGGCNNRVAFIT

Query:  KSELEILDDGFKWRKYGKKSVKNSPHPR
        KSELEILDDG+KWRKYGKKSVKNSPHPR
Subjt:  KSELEILDDGFKWRKYGKKSVKNSPHPR

A0A6J1BUC3 probable WRKY transcription factor 514.5e-3264.29Show/hide
Query:  MNSPQNPSFFFDHHQLQDSSSSFMDFLNFSSYPLPDLSL-EAETVALSLSEGGTGDGSRSMEAT-------DGWCEAEGVKRKKEKGGGCNNRVAFITKS
        MNSPQNPS   +HH  QDSSSSFMDF +FS YP PD  + EAET+ L  +  G      + EAT       + WCE +GVKRKKE GGGC+NRVAF TKS
Subjt:  MNSPQNPSFFFDHHQLQDSSSSFMDFLNFSSYPLPDLSL-EAETVALSLSEGGTGDGSRSMEAT-------DGWCEAEGVKRKKEKGGGCNNRVAFITKS

Query:  ELEILDDGFKWRKYGKKSVKNSPHPR
        ELEILDDGFKWRKYGKKSVK+SP+PR
Subjt:  ELEILDDGFKWRKYGKKSVKNSPHPR

A0A6J1INQ9 probable WRKY transcription factor 511.0e-2864.71Show/hide
Query:  MNSPQNPSFFFDHHQLQDSSSSFMDFLNFSSYPLPDLSLEAETVALSLSEGGTGDGSRSMEATDGWCEAEGV-KRKKEKGGGCNNRVAFITKSELEILDD
        MN  QNPSFF D+HQ QDSS SFMD  + SSYPLP+  LEAET+A   +E  T     SM+AT     +  V KRKKE+G GCNNRVAF TKS LEILDD
Subjt:  MNSPQNPSFFFDHHQLQDSSSSFMDFLNFSSYPLPDLSLEAETVALSLSEGGTGDGSRSMEATDGWCEAEGV-KRKKEKGGGCNNRVAFITKSELEILDD

Query:  GFKWRKYGKKSVKNSPHPR
        GFKWRKYGKKSVKN+ H R
Subjt:  GFKWRKYGKKSVKNSPHPR

A0A6J1KRV9 probable WRKY transcription factor 511.9e-2255.47Show/hide
Query:  MNSPQNPSFFFDHHQLQDSSSSFMDFLNFSSYPLPDLSLEAETVALSLSEGGTGDGSRSME---------ATDGWCEAEGVKRKKE-KGGGCNNRVAFIT
        MNS QNP+      Q +D SSSFMD L+FS YPLPD  LE E     L E   G  SRSME         + D W E   VKR++  +GGGC ++VAF T
Subjt:  MNSPQNPSFFFDHHQLQDSSSSFMDFLNFSSYPLPDLSLEAETVALSLSEGGTGDGSRSME---------ATDGWCEAEGVKRKKE-KGGGCNNRVAFIT

Query:  KSELEILDDGFKWRKYGKKSVKNSPHPR
        KSELEIL DGFKWRKYGKKS+KN+P+PR
Subjt:  KSELEILDDGFKWRKYGKKSVKNSPHPR

SwissProt top hitse value%identityAlignment
Q8VWQ5 Probable WRKY transcription factor 504.3e-1171.74Show/hide
Query:  KRKKEKGGGCNNRVAFITKSELEILDDGFKWRKYGKKSVKNSPHPR
        K++K+K  G   RVAF T+SE+E+LDDGFKWRKYGKK VKNSPHPR
Subjt:  KRKKEKGGGCNNRVAFITKSELEILDDGFKWRKYGKKSVKNSPHPR

Q93WU9 Probable WRKY transcription factor 511.5e-0835.88Show/hide
Query:  MNSPQNPSFFFDHHQLQDSSSSFMDFLNFSSYPLPDLS-------LEAE---TVALSLSEGGTGDGSRSMEATDGWCEAEGVKR---KKEKGGGCNNRVA
        MN  QNPS  F +   ++  + FMD  +FS+    D+        +E E     ++  SE  TG+   S  AT    + E   R   + ++     +RVA
Subjt:  MNSPQNPSFFFDHHQLQDSSSSFMDFLNFSSYPLPDLS-------LEAE---TVALSLSEGGTGDGSRSMEATDGWCEAEGVKR---KKEKGGGCNNRVA

Query:  FITKSELEILDDGFKWRKYGKKSVKNSPHPR
        F T+S+++++DDGFKWRKYGKKSVKN+ + R
Subjt:  FITKSELEILDDGFKWRKYGKKSVKNSPHPR

Q93WV4 WRKY transcription factor 718.0e-1039.64Show/hide
Query:  SSSFMDFLNFSSYPLPDLSLEAETVALSLSEG----GTGDGSRSMEATDGWCEAEG------VKRKKEKGGGCNN--RVAFITKSELEILDDGFKWRKYG
        SS F       + P  +L+  +  V+ S +EG     T D S  ME  +G     G       K+ K+KG       RVAF+TKSE++ L+DG++WRKYG
Subjt:  SSSFMDFLNFSSYPLPDLSLEAETVALSLSEG----GTGDGSRSMEATDGWCEAEG------VKRKKEKGGGCNN--RVAFITKSELEILDDGFKWRKYG

Query:  KKSVKNSPHPR
        +K+VKNSP+PR
Subjt:  KKSVKNSPHPR

Q9FGZ4 Probable WRKY transcription factor 483.4e-0833.33Show/hide
Query:  NSPQNPSFFFDHHQL--QDSSSSFMDFLNFSSYPLPD-----------LSLEAETVALSLSEGGTGDGS------RSMEATDGWCEAEGVK-----RKKE
        +S  + SF FD   L   ++++SF     F+  PLP             S  + +V+ S +E    + S      +  E  D   E +G K     +KK 
Subjt:  NSPQNPSFFFDHHQL--QDSSSSFMDFLNFSSYPLPD-----------LSLEAETVALSLSEGGTGDGS------RSMEATDGWCEAEGVK-----RKKE

Query:  KGGGCNNRVAFITKSELEILDDGFKWRKYGKKSVKNSPHPR
        +      R AF+TKS+++ LDDG++WRKYG+K+VKNSP+PR
Subjt:  KGGGCNNRVAFITKSELEILDDGFKWRKYGKKSVKNSPHPR

Q9FL26 WRKY transcription factor 81.2e-0855.32Show/hide
Query:  VKRKKEKGGGCNNRVAFITKSELEILDDGFKWRKYGKKSVKNSPHPR
        VK KK++      RV+F+TK+E++ L+DG++WRKYG+K+VKNSP+PR
Subjt:  VKRKKEKGGGCNNRVAFITKSELEILDDGFKWRKYGKKSVKNSPHPR

Arabidopsis top hitse value%identityAlignment
AT1G29860.1 WRKY DNA-binding protein 715.7e-1139.64Show/hide
Query:  SSSFMDFLNFSSYPLPDLSLEAETVALSLSEG----GTGDGSRSMEATDGWCEAEG------VKRKKEKGGGCNN--RVAFITKSELEILDDGFKWRKYG
        SS F       + P  +L+  +  V+ S +EG     T D S  ME  +G     G       K+ K+KG       RVAF+TKSE++ L+DG++WRKYG
Subjt:  SSSFMDFLNFSSYPLPDLSLEAETVALSLSEG----GTGDGSRSMEATDGWCEAEG------VKRKKEKGGGCNN--RVAFITKSELEILDDGFKWRKYG

Query:  KKSVKNSPHPR
        +K+VKNSP+PR
Subjt:  KKSVKNSPHPR

AT5G26170.1 WRKY DNA-binding protein 503.0e-1271.74Show/hide
Query:  KRKKEKGGGCNNRVAFITKSELEILDDGFKWRKYGKKSVKNSPHPR
        K++K+K  G   RVAF T+SE+E+LDDGFKWRKYGKK VKNSPHPR
Subjt:  KRKKEKGGGCNNRVAFITKSELEILDDGFKWRKYGKKSVKNSPHPR

AT5G46350.1 WRKY DNA-binding protein 88.2e-1055.32Show/hide
Query:  VKRKKEKGGGCNNRVAFITKSELEILDDGFKWRKYGKKSVKNSPHPR
        VK KK++      RV+F+TK+E++ L+DG++WRKYG+K+VKNSP+PR
Subjt:  VKRKKEKGGGCNNRVAFITKSELEILDDGFKWRKYGKKSVKNSPHPR

AT5G49520.1 WRKY DNA-binding protein 482.4e-0933.33Show/hide
Query:  NSPQNPSFFFDHHQL--QDSSSSFMDFLNFSSYPLPD-----------LSLEAETVALSLSEGGTGDGS------RSMEATDGWCEAEGVK-----RKKE
        +S  + SF FD   L   ++++SF     F+  PLP             S  + +V+ S +E    + S      +  E  D   E +G K     +KK 
Subjt:  NSPQNPSFFFDHHQL--QDSSSSFMDFLNFSSYPLPD-----------LSLEAETVALSLSEGGTGDGS------RSMEATDGWCEAEGVK-----RKKE

Query:  KGGGCNNRVAFITKSELEILDDGFKWRKYGKKSVKNSPHPR
        +      R AF+TKS+++ LDDG++WRKYG+K+VKNSP+PR
Subjt:  KGGGCNNRVAFITKSELEILDDGFKWRKYGKKSVKNSPHPR

AT5G64810.1 WRKY DNA-binding protein 511.1e-0935.88Show/hide
Query:  MNSPQNPSFFFDHHQLQDSSSSFMDFLNFSSYPLPDLS-------LEAE---TVALSLSEGGTGDGSRSMEATDGWCEAEGVKR---KKEKGGGCNNRVA
        MN  QNPS  F +   ++  + FMD  +FS+    D+        +E E     ++  SE  TG+   S  AT    + E   R   + ++     +RVA
Subjt:  MNSPQNPSFFFDHHQLQDSSSSFMDFLNFSSYPLPDLS-------LEAE---TVALSLSEGGTGDGSRSMEATDGWCEAEGVKR---KKEKGGGCNNRVA

Query:  FITKSELEILDDGFKWRKYGKKSVKNSPHPR
        F T+S+++++DDGFKWRKYGKKSVKN+ + R
Subjt:  FITKSELEILDDGFKWRKYGKKSVKNSPHPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCCCACAAAACCCTAGCTTCTTCTTTGACCACCATCAACTTCAAGACTCATCTTCTTCATTTATGGATTTTCTCAATTTCTCAAGTTACCCGCTTCCCGATCT
CAGCCTTGAAGCCGAGACTGTGGCGTTGTCGTTGTCGGAGGGAGGAACCGGCGACGGGAGCAGATCCATGGAAGCAACAGATGGGTGGTGTGAGGCGGAGGGTGTGAAGA
GAAAAAAAGAGAAAGGAGGTGGGTGCAATAATAGGGTTGCATTTATAACAAAGTCGGAATTGGAAATATTGGATGATGGCTTCAAATGGAGAAAGTATGGCAAAAAATCT
GTCAAGAATAGCCCTCATCCAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACTCCCCACAAAACCCTAGCTTCTTCTTTGACCACCATCAACTTCAAGACTCATCTTCTTCATTTATGGATTTTCTCAATTTCTCAAGTTACCCGCTTCCCGATCT
CAGCCTTGAAGCCGAGACTGTGGCGTTGTCGTTGTCGGAGGGAGGAACCGGCGACGGGAGCAGATCCATGGAAGCAACAGATGGGTGGTGTGAGGCGGAGGGTGTGAAGA
GAAAAAAAGAGAAAGGAGGTGGGTGCAATAATAGGGTTGCATTTATAACAAAGTCGGAATTGGAAATATTGGATGATGGCTTCAAATGGAGAAAGTATGGCAAAAAATCT
GTCAAGAATAGCCCTCATCCAAGGTAA
Protein sequenceShow/hide protein sequence
MNSPQNPSFFFDHHQLQDSSSSFMDFLNFSSYPLPDLSLEAETVALSLSEGGTGDGSRSMEATDGWCEAEGVKRKKEKGGGCNNRVAFITKSELEILDDGFKWRKYGKKS
VKNSPHPR