; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G010810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G010810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioniron-sulfur assembly protein IscA, chloroplastic-like
Genome locationchr01:8972619..8975549
RNA-Seq ExpressionLsi01G010810
SyntenyLsi01G010810
Gene Ontology termsGO:0016226 - iron-sulfur cluster assembly (biological process)
GO:0009570 - chloroplast stroma (cellular component)
GO:0030674 - protein binding, bridging (molecular function)
GO:0051536 - iron-sulfur cluster binding (molecular function)
InterPro domainsIPR000361 - FeS cluster biogenesis
IPR016092 - FeS cluster insertion protein
IPR017870 - FeS cluster insertion, C-terminal, conserved site
IPR031108 - FeS assembly protein IscA, plant/cyanobacteria type
IPR035903 - HesB-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595092.1 Iron-sulfur assembly protein IscA, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.6e-6198.32Show/hide
Query:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
        APASEGIAPAISLTDNALKH NKMR+ERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
Subjt:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF

Query:  KNPNATQTCGCGKSFAAEM
        KNPNATQTCGCGKSFAAEM
Subjt:  KNPNATQTCGCGKSFAAEM

KAG7034403.1 Iron-sulfur assembly protein IscA, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]4.0e-62100Show/hide
Query:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
        APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
Subjt:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF

Query:  KNPNATQTCGCGKSFAAEM
        KNPNATQTCGCGKSFAAEM
Subjt:  KNPNATQTCGCGKSFAAEM

XP_022950286.1 iron-sulfur assembly protein IscA, chloroplastic-like [Cucurbita moschata]4.0e-62100Show/hide
Query:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
        APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
Subjt:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF

Query:  KNPNATQTCGCGKSFAAEM
        KNPNATQTCGCGKSFAAEM
Subjt:  KNPNATQTCGCGKSFAAEM

XP_023003843.1 iron-sulfur assembly protein IscA, chloroplastic-like [Cucurbita maxima]1.5e-6196.69Show/hide
Query:  MTAPASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGF
        + APASEGIAPAISLTDNALKH NKMR+ERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGF
Subjt:  MTAPASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGF

Query:  SFKNPNATQTCGCGKSFAAEM
        SFKNPNATQTCGCGKSFAAEM
Subjt:  SFKNPNATQTCGCGKSFAAEM

XP_038880838.1 iron-sulfur assembly protein IscA, chloroplastic [Benincasa hispida]2.6e-6198.32Show/hide
Query:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
        APA+EGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
Subjt:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF

Query:  KNPNATQTCGCGKSFAAEM
        KNPNATQTCGCGKSFAAE+
Subjt:  KNPNATQTCGCGKSFAAEM

TrEMBL top hitse value%identityAlignment
A0A6J1BTR2 iron-sulfur assembly protein IscA, chloroplastic isoform X11.1e-6096.64Show/hide
Query:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
        AP SEGIAPAISLTDNAL HLNKMRS+RNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
Subjt:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF

Query:  KNPNATQTCGCGKSFAAEM
        KNPNATQTCGCGKSFAA+M
Subjt:  KNPNATQTCGCGKSFAAEM

A0A6J1GEF0 iron-sulfur assembly protein IscA, chloroplastic-like1.9e-62100Show/hide
Query:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
        APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
Subjt:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF

Query:  KNPNATQTCGCGKSFAAEM
        KNPNATQTCGCGKSFAAEM
Subjt:  KNPNATQTCGCGKSFAAEM

A0A6J1HDZ4 iron-sulfur assembly protein IscA, chloroplastic-like1.3e-6198.32Show/hide
Query:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
        APASEGIAPAISLTDNALKH NKMR+ERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
Subjt:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF

Query:  KNPNATQTCGCGKSFAAEM
        KNPNATQTCGCGKSFAAEM
Subjt:  KNPNATQTCGCGKSFAAEM

A0A6J1ISS5 iron-sulfur assembly protein IscA, chloroplastic-like6.2e-6198.32Show/hide
Query:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
        APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENR NARPDDSIIEYN FVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
Subjt:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF

Query:  KNPNATQTCGCGKSFAAEM
        KNPNATQTCGCGKSFAAEM
Subjt:  KNPNATQTCGCGKSFAAEM

A0A6J1KXS8 iron-sulfur assembly protein IscA, chloroplastic-like7.4e-6296.69Show/hide
Query:  MTAPASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGF
        + APASEGIAPAISLTDNALKH NKMR+ERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGF
Subjt:  MTAPASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGF

Query:  SFKNPNATQTCGCGKSFAAEM
        SFKNPNATQTCGCGKSFAAEM
Subjt:  SFKNPNATQTCGCGKSFAAEM

SwissProt top hitse value%identityAlignment
P51217 Uncharacterized protein ycf832.0e-3255.66Show/hide
Query:  ISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCG
        I+LT+ A + +  ++S  + ++CLRIGV+QGGCSGMSY+M FE+ ++ R  D ++  + F++ CDPKSLL+L+G+ LDYS  LIGGGF F NPNA+QTCG
Subjt:  ISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCG

Query:  CGKSFA
        CGKSF+
Subjt:  CGKSFA

P72731 Uncharacterized protein slr14172.3e-3662.96Show/hide
Query:  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQ
        A  I L+D ALKHL  ++ ++ +DLCLR+GVRQGGCSGMSY M+FE    A   D + +Y GF I+CD KSLL+L+G+ LDYS+ALIGGGF F NPNA Q
Subjt:  APAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQ

Query:  TCGCGKSF
        TCGCGKSF
Subjt:  TCGCGKSF

Q1XDR9 Uncharacterized protein ycf838.5e-3154.46Show/hide
Query:  EGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPN
        EG    I++T  ALK +  ++++   D+ LRIGVRQGGCSGMSY+M FE+    +  D  +  + F +VCDPKSLL+L+G+ LD+S  LIGGGF F NPN
Subjt:  EGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPN

Query:  ATQTCGCGKSFA
        A+QTCGCGKSF+
Subjt:  ATQTCGCGKSFA

Q9MSA1 Uncharacterized protein ycf834.2e-3054.21Show/hide
Query:  ISLTDNALKHLNKMRSERNED-LCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTC
        I++T +AL HLN +    +ED L +RIG++QGGCSG+SY M +E ++N   +D + +Y+ F +VCD KS+L+L+G+ LDYS +LI GGF F NPNA QTC
Subjt:  ISLTDNALKHLNKMRSERNED-LCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTC

Query:  GCGKSFA
        GCGKSF+
Subjt:  GCGKSFA

Q9XIK3 Iron-sulfur assembly protein IscA, chloroplastic3.6e-5888.24Show/hide
Query:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
        APA EG+ PAISL++NALKHL+KMRSER EDLCLRIGV+QGGCSGMSYTM+FENRANARPDDS IEY GF IVCDPKS+LFLFGMQLDYSDALIGGGFSF
Subjt:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF

Query:  KNPNATQTCGCGKSFAAEM
         NPNATQTCGCGKSFAAEM
Subjt:  KNPNATQTCGCGKSFAAEM

Arabidopsis top hitse value%identityAlignment
AT1G10500.1 chloroplast-localized ISCA-like protein2.6e-5988.24Show/hide
Query:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF
        APA EG+ PAISL++NALKHL+KMRSER EDLCLRIGV+QGGCSGMSYTM+FENRANARPDDS IEY GF IVCDPKS+LFLFGMQLDYSDALIGGGFSF
Subjt:  APASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSF

Query:  KNPNATQTCGCGKSFAAEM
         NPNATQTCGCGKSFAAEM
Subjt:  KNPNATQTCGCGKSFAAEM

AT2G36260.1 Iron-sulphur cluster biosynthesis family protein1.1e-1232.38Show/hide
Query:  ISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCG
        ++L+D A   + ++   + +   LR+ V   GC+G+SY + +         D ++E  G  I+ DPK+++ + G ++D+ D  +   F F NPNAT+ CG
Subjt:  ISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQTCG

Query:  CGKSF
        CG+SF
Subjt:  CGKSF

AT5G03905.1 Iron-sulphur cluster biosynthesis family protein4.6e-1637.27Show/hide
Query:  ISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFK-NPNATQTC
        + L+DN ++ + +++S   E   LR+GV  GGCSG  Y  E +NR N  PDD + E NG  +V D  S   + G  +DY + LI   F    NP+A   C
Subjt:  ISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFK-NPNATQTC

Query:  GCGKSFAAEM
         C  SF  ++
Subjt:  GCGKSFAAEM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCTCCAGCATCTGAGGGTATAGCACCGGCTATCTCATTAACCGATAATGCATTGAAACACTTGAATAAAATGAGATCTGAACGTAATGAAGATTTGTGCTTAAG
AATTGGTGTCAGACAGGGTGGATGCTCTGGTATGTCCTACACTATGGAGTTTGAGAACAGGGCAAATGCTAGACCTGATGACTCAATTATAGAATATAATGGTTTTGTGA
TAGTATGTGATCCAAAGAGCCTACTTTTCTTGTTTGGAATGCAATTGGACTACAGCGACGCACTTATTGGTGGGGGCTTCTCTTTCAAGAACCCGAATGCTACACAAACT
TGTGGTTGTGGAAAATCATTTGCTGCAGAAATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGCTCCAGCATCTGAGGGTATAGCACCGGCTATCTCATTAACCGATAATGCATTGAAACACTTGAATAAAATGAGATCTGAACGTAATGAAGATTTGTGCTTAAG
AATTGGTGTCAGACAGGGTGGATGCTCTGGTATGTCCTACACTATGGAGTTTGAGAACAGGGCAAATGCTAGACCTGATGACTCAATTATAGAATATAATGGTTTTGTGA
TAGTATGTGATCCAAAGAGCCTACTTTTCTTGTTTGGAATGCAATTGGACTACAGCGACGCACTTATTGGTGGGGGCTTCTCTTTCAAGAACCCGAATGCTACACAAACT
TGTGGTTGTGGAAAATCATTTGCTGCAGAAATGTAG
Protein sequenceShow/hide protein sequence
MTAPASEGIAPAISLTDNALKHLNKMRSERNEDLCLRIGVRQGGCSGMSYTMEFENRANARPDDSIIEYNGFVIVCDPKSLLFLFGMQLDYSDALIGGGFSFKNPNATQT
CGCGKSFAAEM