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Lsi01G010840 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G010840
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 2
Genome locationchr01:8985477..8985944
RNA-Seq ExpressionLsi01G010840
SyntenyLsi01G010840
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0031090 - organelle membrane (cellular component)
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEZ21254.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 [Tanacetum cinerariifolium]3.1e-2771.57Show/hide
Query:  SVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSASILGKR
        ++ GS    +G    PG+II TCTS+LGTVERVTRLL HSTTFVPIIHSLTERSSE QPAHTASGEDGTTGKDRLAKTPQARSV  L+  +GS   +G++
Subjt:  SVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSASILGKR

Query:  GS
        GS
Subjt:  GS

KAC9255308.1 hypothetical protein E3N88_46107 [Mikania micrantha]2.8e-2872.55Show/hide
Query:  SVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSASILGKR
        ++ GS    +G    PG+IITTCTS+LGTVERVTRLL HSTTFVP+IHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSV  L   +GS   +G++
Subjt:  SVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSASILGKR

Query:  GS
        GS
Subjt:  GS

KAD0475168.1 hypothetical protein E3N88_44205 [Mikania micrantha]2.4e-2778.26Show/hide
Query:  GLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSASILGKRGS
        G    PG+IITTCTS+LGTVERVTRLL HSTTFVP+IHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSV  L   +GS   +G++GS
Subjt:  GLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSASILGKRGS

KAD4981916.1 hypothetical protein E3N88_18587 [Mikania micrantha]2.2e-2872.55Show/hide
Query:  SVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSASILGKR
        ++ GS    +G    PG+IITTCTS+LGTVERVTRLL HSTTFVP+IHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSV  L +  GS   +G++
Subjt:  SVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSASILGKR

Query:  GS
        GS
Subjt:  GS

YP_008992385.1 hypothetical protein Salmi_Mp140 [Salvia miltiorrhiza]8.5e-3380.85Show/hide
Query:  MEDRPTRVFMSVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSV
        MEDRPTRV  ++ GS    +G    PG+IITTCT HLGTVERVTRLL HSTTFVP+IHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSV
Subjt:  MEDRPTRVFMSVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSV

TrEMBL top hitse value%identityAlignment
A0A4D8YFM0 Uncharacterized protein3.3e-3070Show/hide
Query:  TRVFMSVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSAS
        TRV  ++ GS    +G    PG+IITTCT HLGTVERVTRLL HSTTFVP+IHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSV  L E    A 
Subjt:  TRVFMSVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSAS

Query:  ILGKRGSEPI
            RG+E +
Subjt:  ILGKRGSEPI

A0A5N6LCP7 ATP synthase subunit alpha, mitochondrial1.2e-2778.26Show/hide
Query:  GLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSASILGKRGS
        G    PG+IITTCTS+LGTVERVTRLL HSTTFVP+IHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSV  L   +GS   +G++GS
Subjt:  GLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSASILGKRGS

A0A5N6LCV2 Uncharacterized protein1.4e-2872.55Show/hide
Query:  SVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSASILGKR
        ++ GS    +G    PG+IITTCTS+LGTVERVTRLL HSTTFVP+IHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSV  L   +GS   +G++
Subjt:  SVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSASILGKR

Query:  GS
        GS
Subjt:  GS

A0A5N6NKT9 Reverse transcriptase Ty1/copia-type domain-containing protein1.0e-2872.55Show/hide
Query:  SVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSASILGKR
        ++ GS    +G    PG+IITTCTS+LGTVERVTRLL HSTTFVP+IHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSV  L +  GS   +G++
Subjt:  SVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSASILGKR

Query:  GS
        GS
Subjt:  GS

V9P5B5 Uncharacterized protein4.1e-3380.85Show/hide
Query:  MEDRPTRVFMSVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSV
        MEDRPTRV  ++ GS    +G    PG+IITTCT HLGTVERVTRLL HSTTFVP+IHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSV
Subjt:  MEDRPTRVFMSVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGACCGACCGACCCGGGTTTTCATGAGCGTTGGCGGGTCCTGGAGTGCCTGTCAAGGGCTCCCGCGCATACCCGGGTTGATCATCACCACCTGCACCTCACATCT
CGGCACAGTGGAACGTGTAACCCGCCTGCTGTCTCATTCAACTACATTTGTTCCTATAATTCATAGCCTAACAGAACGCAGCAGCGAGGGGCAACCTGCCCATACAGCCA
GTGGGGAGGATGGCACTACTGGCAAAGACCGTCTGGCGAAAACGCCGCAGGCGCGAAGCGTGAAAAGGCTCTATGAAGTAAAGGGAAGTGCATCAATTCTTGGAAAAAGA
GGGAGCGAGCCTATAGAAAAAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGACCGACCGACCCGGGTTTTCATGAGCGTTGGCGGGTCCTGGAGTGCCTGTCAAGGGCTCCCGCGCATACCCGGGTTGATCATCACCACCTGCACCTCACATCT
CGGCACAGTGGAACGTGTAACCCGCCTGCTGTCTCATTCAACTACATTTGTTCCTATAATTCATAGCCTAACAGAACGCAGCAGCGAGGGGCAACCTGCCCATACAGCCA
GTGGGGAGGATGGCACTACTGGCAAAGACCGTCTGGCGAAAACGCCGCAGGCGCGAAGCGTGAAAAGGCTCTATGAAGTAAAGGGAAGTGCATCAATTCTTGGAAAAAGA
GGGAGCGAGCCTATAGAAAAAATCTAA
Protein sequenceShow/hide protein sequence
MEDRPTRVFMSVGGSWSACQGLPRIPGLIITTCTSHLGTVERVTRLLSHSTTFVPIIHSLTERSSEGQPAHTASGEDGTTGKDRLAKTPQARSVKRLYEVKGSASILGKR
GSEPIEKI