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Lsi01G010870 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G010870
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNADH dehydrogenase subunit 7
Genome locationchr01:8991253..8992847
RNA-Seq ExpressionLsi01G010870
SyntenyLsi01G010870
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051287 - NAD binding (molecular function)
InterPro domainsIPR001135 - NADH-quinone oxidoreductase, subunit D
IPR022885 - NAD(P)H-quinone oxidoreductase subunit D/H
IPR029014 - [NiFe]-hydrogenase, large subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8362771.1 hypothetical protein BUALT_BualtUnG0042100 [Buddleja alternifolia]2.4e-5292.37Show/hide
Query:  MMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQG
        MMGNYHVRFGERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPG AHSQG
Subjt:  MMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQG

Query:  LDSMSKHHMPADVVTIIG
        LDSMSKHHMPADVVTIIG
Subjt:  LDSMSKHHMPADVVTIIG

QVJ97872.1 hypothetical protein [Apium graveolens]1.5e-5191.53Show/hide
Query:  MMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQG
        MMGNYHVRFGERWDR     +RCKLFLSIAGQMTT  SSVYSTSIHHFE YTEGFSVPA STYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQG
Subjt:  MMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQG

Query:  LDSMSKHHMPADVVTIIG
        LDSMSKHHMPADVVTIIG
Subjt:  LDSMSKHHMPADVVTIIG

XP_016435338.1 PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like [Nicotiana tabacum]4.5e-5191.45Show/hide
Query:  MGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGL
        MGNYHVRFGERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVPA STYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPG AHSQGL
Subjt:  MGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGL

Query:  DSMSKHHMPADVVTIIG
        DSMSKHHMPADVVTIIG
Subjt:  DSMSKHHMPADVVTIIG

XP_018628934.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like [Nicotiana tomentosiformis]5.8e-5189.83Show/hide
Query:  MMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQG
        MMGNYHVRFGERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVP+ ST+TAVEAPKGEFGVFLVSNGSNRPYRRKIRAPG AHSQG
Subjt:  MMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQG

Query:  LDSMSKHHMPADVVTIIG
        LDSMSKHHMPADVVTIIG
Subjt:  LDSMSKHHMPADVVTIIG

XP_022897754.1 uncharacterized protein LOC111411454 [Olea europaea var. sylvestris]1.2e-5192.31Show/hide
Query:  MGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGL
        MGNYHVRFGERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPG AHSQGL
Subjt:  MGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGL

Query:  DSMSKHHMPADVVTIIG
        DSMSKHHMPADVVTIIG
Subjt:  DSMSKHHMPADVVTIIG

TrEMBL top hitse value%identityAlignment
A0A151UDY3 NADH-ubiquinone oxidoreductase 49 kDa subunit4.1e-5090.6Show/hide
Query:  MGNYHVRFGERWD--RQDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGL
        MGNYHVRFGER D      +RCKLFLSIAG+MTTG SSVYSTSIHHFELYTEGFSVPA STYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGL
Subjt:  MGNYHVRFGERWD--RQDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGL

Query:  DSMSKHHMPADVVTIIG
        DSMSKHHMPADVVTIIG
Subjt:  DSMSKHHMPADVVTIIG

A0A1S3X6J4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like2.2e-5191.45Show/hide
Query:  MGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGL
        MGNYHVRFGERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVPA STYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPG AHSQGL
Subjt:  MGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGL

Query:  DSMSKHHMPADVVTIIG
        DSMSKHHMPADVVTIIG
Subjt:  DSMSKHHMPADVVTIIG

A0A2G2Y7L1 Complex1_49kDa domain-containing protein2.4e-5089.74Show/hide
Query:  MGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGL
        MGNYHVRFGERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGFSVPA STYT VEAPKGEFGVFLVSNGSNRPY RKIRAPG AHSQGL
Subjt:  MGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGL

Query:  DSMSKHHMPADVVTIIG
        DSMSKHHMPADVVTIIG
Subjt:  DSMSKHHMPADVVTIIG

A0A6N2B279 Complex1_49kDa domain-containing protein8.5e-4885.59Show/hide
Query:  MMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQG
        MMGNYHVRFGERWDR     +RCKLFLSIAGQMTT  SSVYSTSIHHFE Y EGFSVP  STYT VEAPKGEFGVFLVSNGSNRPYR  IRAPG AHSQG
Subjt:  MMGNYHVRFGERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQG

Query:  LDSMSKHHMPADVVTIIG
        L+SMSKHHMPADVVTIIG
Subjt:  LDSMSKHHMPADVVTIIG

D7TKS7 Complex1_49kDa domain-containing protein8.0e-4690.83Show/hide
Query:  GERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHM
        GERWDR     +RCKLFLSIAGQMTTG SSVYSTSIHHFE YTEGF VPA STYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHM
Subjt:  GERWDR--QDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHM

Query:  PADVVTIIG
        PADVVTIIG
Subjt:  PADVVTIIG

SwissProt top hitse value%identityAlignment
O21270 NADH-ubiquinone oxidoreductase 49 kDa subunit8.8e-2675.68Show/hide
Query:  IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIG
        IHHF+LYTEG+SVP   TYTAVEAPKGEFGV+LVS+GS++PYR KI+APG +H QGL+ MSK HM ADVVTIIG
Subjt:  IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIG

P93306 NADH dehydrogenase [ubiquinone] iron-sulfur protein 25.2e-3475.76Show/hide
Query:  PARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIG
        P+RC++ LS+             +SIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYR KIRAPG AH QGLD MSKHHM ADVVTIIG
Subjt:  PARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIG

Q36450 NADH dehydrogenase [ubiquinone] iron-sulfur protein 25.2e-3493.42Show/hide
Query:  TSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIG
        +SIHHFE YTEGFSVPA STYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAP  AHSQGLDSMSKHHMPADVVTIIG
Subjt:  TSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIG

Q37619 NADH-ubiquinone oxidoreductase 49 kDa subunit6.8e-2675.68Show/hide
Query:  IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIG
        IHHF+ YT GF VPA  TYTAVEAPKGEFGV+LVSNG+++PYR KIRAPG AH QGLD M+++HM ADVVTIIG
Subjt:  IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIG

Q9TC96 NADH dehydrogenase [ubiquinone] iron-sulfur protein 22.7e-2778.38Show/hide
Query:  IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIG
        IHHF+L+TEG++VP S TYT+VEAPKGEFGV+LVSNG+NRPYR KIRAPG  H QGLD MSK+HM ADVVTIIG
Subjt:  IHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIG

Arabidopsis top hitse value%identityAlignment
ATCG01110.1 NAD(P)H dehydrogenase subunit H2.2e-0843.75Show/hide
Query:  FSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIG
        F +     Y  VEAPKGE G+FL+ + S  P+R KIR PG  + Q L  + K    AD++TI+G
Subjt:  FSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIG

ATMG00510.1 NADH dehydrogenase subunit 72.5e-3980.81Show/hide
Query:  PARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIG
        P+RC++ LS+             +SIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIG
Subjt:  PARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGGAAACTACCACGTTAGGTTTGGAGAGAGATGGGACCGGCAAGACCCAGCCAGATGCAAGCTTTTTCTTTCAATAGCCGGCCAAATGACTACAGGATCATCATC
GGTCTACTCTACCTCAATTCACCATTTCGAACTTTATACAGAAGGTTTTTCCGTACCAGCTTCTTCTACCTATACCGCAGTGGAAGCACCTAAAGGTGAATTTGGTGTCT
TTCTGGTCAGTAATGGAAGCAATCGTCCCTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTCCAAACATCACATGCCAGCGGAT
GTGGTCACCATCATAGGCTGGGCTTACGTTTTTCAACTGCATCGTACCGTACGATGGGAGGGGTCCGTACCTCCTTTAGATATCTCGAGCCCCCGTGCTCCTAATGTCGA
GCTAGAACGACAGCTACCGTGGAATCTGCGATCACACATGAGTACCTCGCCTTCCAAAAAAAGCGGCTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGGAAACTACCACGTTAGGTTTGGAGAGAGATGGGACCGGCAAGACCCAGCCAGATGCAAGCTTTTTCTTTCAATAGCCGGCCAAATGACTACAGGATCATCATC
GGTCTACTCTACCTCAATTCACCATTTCGAACTTTATACAGAAGGTTTTTCCGTACCAGCTTCTTCTACCTATACCGCAGTGGAAGCACCTAAAGGTGAATTTGGTGTCT
TTCTGGTCAGTAATGGAAGCAATCGTCCCTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTCCAAACATCACATGCCAGCGGAT
GTGGTCACCATCATAGGCTGGGCTTACGTTTTTCAACTGCATCGTACCGTACGATGGGAGGGGTCCGTACCTCCTTTAGATATCTCGAGCCCCCGTGCTCCTAATGTCGA
GCTAGAACGACAGCTACCGTGGAATCTGCGATCACACATGAGTACCTCGCCTTCCAAAAAAAGCGGCTGCTAA
Protein sequenceShow/hide protein sequence
MMGNYHVRFGERWDRQDPARCKLFLSIAGQMTTGSSSVYSTSIHHFELYTEGFSVPASSTYTAVEAPKGEFGVFLVSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPAD
VVTIIGWAYVFQLHRTVRWEGSVPPLDISSPRAPNVELERQLPWNLRSHMSTSPSKKSGC