CuGenDBv2

Gene ID	Lsi01G010900
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	NADH-quinone oxidoreductase subunit D
Genome location	chr01:8999869..9000629
RNA-Seq Expression	Lsi01G010900
Synteny	Lsi01G010900
Gene Ontology terms	GO:0006541 - glutamine metabolic process (biological process) GO:0044210 - 'de novo' CTP biosynthetic process (biological process) GO:0005739 - mitochondrion (cellular component) GO:0003883 - CTP synthase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016651 - oxidoreductase activity, acting on NAD(P)H (molecular function) GO:0048038 - quinone binding (molecular function) GO:0051287 - NAD binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

GAY68548.1 hypothetical protein CUMW_265020 [Citrus unshiu]

8.3e-25

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Query:  IDLRMNAGLGHLEWREPHAGRPARTGDLVERPAGAHPTRGTEKLIEYKTYLQALPYSDRS
        +DLRMNAGL HLEWREPHAGRPARTGDLVERPAGAHPTRGTEKLIEYKTYLQALPYSD+S
Subjt:  IDLRMNAGLGHLEWREPHAGRPARTGDLVERPAGAHPTRGTEKLIEYKTYLQALPYSDRS

GFS28444.1 hypothetical protein Acr_00g0001890 [Actinidia rufa]

4.7e-20

92.98

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Query:  TQQRGATCPYSQRGGWHYWQRPSGENAAGAKRGRPAPGEHSIGGKGSPDGGRARGGR
        TQQRG T PYSQRGGWHYWQRPSGENAAGAKRGRPAPGEHSI  KGSPDGGRARGGR
Subjt:  TQQRGATCPYSQRGGWHYWQRPSGENAAGAKRGRPAPGEHSIGGKGSPDGGRARGGR

KAB1219912.1 hypothetical protein CJ030_MR3G009554 [Morella rubra]

1.2e-20

92.98

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Query:  TQQRGATCPYSQRGGWHYWQRPSGENAAGAKRGRPAPGEHSIGGKGSPDGGRARGGR
        TQQRG T PYSQRGGWHYWQRPSGENAAGAKRGRPAPGEHSIG KG PDGGRARGGR
Subjt:  TQQRGATCPYSQRGGWHYWQRPSGENAAGAKRGRPAPGEHSIGGKGSPDGGRARGGR

KAB8468460.1 hypothetical protein FH972_025294 [Carpinus fangiana]

4.3e-21

94.74

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Query:  TQQRGATCPYSQRGGWHYWQRPSGENAAGAKRGRPAPGEHSIGGKGSPDGGRARGGR
        TQQRG T PYSQRGGWHYWQRPSGENAAGAKRGRPAPGEHSIG KGSPDGGRARGGR
Subjt:  TQQRGATCPYSQRGGWHYWQRPSGENAAGAKRGRPAPGEHSIGGKGSPDGGRARGGR

KAF1856945.1 hypothetical protein Lal_00002353 [Lupinus albus]

1.1e-21

72.5

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Query:  PNRTQQRGATCPYSQRGGWHYWQRPSGENAAGAKRGRPAPGEHSIGGKGSPDGGRARGGRTALPTRELASEVKQSQFHYR
        PNRTQQRG T PYSQRGGWHYWQRPSGENAAGAKRGRP PGEHSIG KGS DGGRARGG   L   E  S +++     R
Subjt:  PNRTQQRGATCPYSQRGGWHYWQRPSGENAAGAKRGRPAPGEHSIGGKGSPDGGRARGGRTALPTRELASEVKQSQFHYR

TrEMBL top hits

e value

%identity

Alignment

A0A0E0DVR6 Uncharacterized protein

2.0e-24

88.06

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Query:  DLRMNAGLGHLEWREPHAGRPARTGDLVERPAGAHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE
        DLRMNA LGHL+WREPHAGRPART     RPAGAHPTRGTEKLIEYKTYLQALPY DRSEGDRGVTE
Subjt:  DLRMNAGLGHLEWREPHAGRPARTGDLVERPAGAHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE

A0A2H5QV90 Uncharacterized protein

4.0e-25

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Query:  IDLRMNAGLGHLEWREPHAGRPARTGDLVERPAGAHPTRGTEKLIEYKTYLQALPYSDRS
        +DLRMNAGL HLEWREPHAGRPARTGDLVERPAGAHPTRGTEKLIEYKTYLQALPYSD+S
Subjt:  IDLRMNAGLGHLEWREPHAGRPARTGDLVERPAGAHPTRGTEKLIEYKTYLQALPYSDRS

A0A453J299 Uncharacterized protein

6.4e-23

87.5

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Query:  MNAGLGHLEWREPHAGRPARTGDLVERPAGAHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE
        MNAGLGHL+WREPHAGRPART     RPAGAHPTRGTEKLIEYKTYLQALPY DR EGDRGVTE
Subjt:  MNAGLGHLEWREPHAGRPARTGDLVERPAGAHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE

A0A5N6L0Z7 Uncharacterized protein

2.1e-21

94.74

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Query:  TQQRGATCPYSQRGGWHYWQRPSGENAAGAKRGRPAPGEHSIGGKGSPDGGRARGGR
        TQQRG T PYSQRGGWHYWQRPSGENAAGAKRGRPAPGEHSIG KGSPDGGRARGGR
Subjt:  TQQRGATCPYSQRGGWHYWQRPSGENAAGAKRGRPAPGEHSIGGKGSPDGGRARGGR

A0A6A5LBY9 Uncharacterized protein

5.4e-22

72.5

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Query:  PNRTQQRGATCPYSQRGGWHYWQRPSGENAAGAKRGRPAPGEHSIGGKGSPDGGRARGGRTALPTRELASEVKQSQFHYR
        PNRTQQRG T PYSQRGGWHYWQRPSGENAAGAKRGRP PGEHSIG KGS DGGRARGG   L   E  S +++     R
Subjt:  PNRTQQRGATCPYSQRGGWHYWQRPSGENAAGAKRGRPAPGEHSIGGKGSPDGGRARGGRTALPTRELASEVKQSQFHYR

SwissProt top hits

e value

%identity

Alignment

A5VAM0 NADH-quinone oxidoreductase subunit D

2.9e-04

69.44

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Query:  GDLVER--PAGAHPTRGTEKLIEYKTYLQALPYSDR
        G++VER  P      RGTEKLIEYKTYLQALPY DR
Subjt:  GDLVER--PAGAHPTRGTEKLIEYKTYLQALPYSDR

P93306 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2

9.9e-05

68.42

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Query:  GDLVER--PAGAHPTRGTEKLIEYKTYLQALPYSDRSE
        G++VER  P      RGTEKLIEYKTYLQALPY DRS+
Subjt:  GDLVER--PAGAHPTRGTEKLIEYKTYLQALPYSDRSE

Q1GTK0 NADH-quinone oxidoreductase subunit D

3.8e-04

66.67

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Query:  GDLVER--PAGAHPTRGTEKLIEYKTYLQALPYSDR
        G+++ER  P      RGTEKLIEYKTYLQALPY DR
Subjt:  GDLVER--PAGAHPTRGTEKLIEYKTYLQALPYSDR

Q36450 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2

6.8e-06

73.68

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Query:  GDLVER--PAGAHPTRGTEKLIEYKTYLQALPYSDRSE
        G++VER  P      RGTEKLIEYKTYLQALPYSDRSE
Subjt:  GDLVER--PAGAHPTRGTEKLIEYKTYLQALPYSDRSE

Q5PAR3 NADH-quinone oxidoreductase subunit D

4.9e-04

64.86

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Query:  TGDLVER--PAGAHPTRGTEKLIEYKTYLQALPYSDR
        +G+++ER  P      RGTEKLIEYKTYLQALPY DR
Subjt:  TGDLVER--PAGAHPTRGTEKLIEYKTYLQALPYSDR

Arabidopsis top hits

e value

%identity

Alignment

ATMG00510.1 NADH dehydrogenase subunit 7

8.3e-07

71.05

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Query:  GDLVER--PAGAHPTRGTEKLIEYKTYLQALPYSDRSE
        G++VER  P      RGTEKLIEYKTYLQALPYSDRS+
Subjt:  GDLVER--PAGAHPTRGTEKLIEYKTYLQALPYSDRSE

Sequences

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CDS sequence

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ATGAGCCCTAACAGAACGCAGCAGCGAGGGGCAACCTGCCCATACAGCCAGCGGGGAGGATGGCACTACTGGCAAAGACCGTCTGGCGAAAACGCCGCAGGCGCGAAGCG
TGGTAGGCCTGCGCCGGGGGAGCATAGCATAGGCGGGAAAGGGAGCCCGGACGGTGGAAGAGCCAGGGGAGGCCGGACAGCGCTGCCTACACGCGAATTAGCTTCCGAGG
TCAAGCAGTCTCAATTTCACTACAGGATTGATTTGCGAATGAATGCTGGGCTGGGCCACCTCGAATGGCGTGAGCCGCATGCGGGGAGACCCGCACGTACGGGGGATCTG
GTCGAAAGACCGGCCGGCGCCCACCCGACTAGAGGGACTGAGAAATTAATAGAGTACAAAACTTATCTTCAAGCTTTACCTTATTCTGATCGTTCAGAGGGCGATCGCGG
AGTCACTGAATGA

mRNA sequence

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Protein sequence

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MSPNRTQQRGATCPYSQRGGWHYWQRPSGENAAGAKRGRPAPGEHSIGGKGSPDGGRARGGRTALPTRELASEVKQSQFHYRIDLRMNAGLGHLEWREPHAGRPARTGDL
VERPAGAHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE

Lsi01G010900 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome